Polysaccharide Lyase Family 6

Activities in Familyalginate lyase (EC 4.2.2.3); chondroitinase B (EC 4.2.2.19); MG-specific alginate lyase (EC 4.2.2.-)
3D Structure Statusparallel β-helix
Statistics GenBank accession (316); Uniprot accession (24); PDB accession (6); 3D entries (2); cryst (0)
All (303) Bacteria (303) Structure (2) Characterized (20)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 BN863_70   Formosa agariphila KMM 3901 CDF77719.1    
 BN863_12720   Formosa agariphila KMM 3901 CDF78984.1     1
 Fuma_04814 (CslB)   Fuerstia marisgermanicae NH11 APZ95159.1     1
 Glaag_3633   Glaciecola sp. 4H-3-7+YE-5 AEE24563.1     1
 Glaag_0815   Glaciecola sp. 4H-3-7+YE-5 AEE21778.1     3
 Glaag_3654   Glaciecola sp. 4H-3-7+YE-5 AEE24583.1     1
 orf1134   Gramella forsetii KT0803 CAL66121.1 A0M0H6   1
 Hbal_2772   Hirschia baltica ATCC 49814 ATCC 59814 ACT60445.1 C6XQE6   1
 AOZ06_12315   Kibdelosporangium phytohabitans KLBMP1111 ALG14744.1     2
 ORF   Kibdelosporangium sp. MJ126-NF4 CTQ96291.1     2
 KALB_5431   Kutzneria albida DSM 43870 AHH98793.1     2
 Lacal_1746   Lacinutrix sp. 5H-3-7-4 AEH01594.1     1
 BWR22_11855   Lacinutrix venerupis DOK2-8 APY00971.1     1
 BBK82_04255   Lentzea guizhouensis DHS C013 ANZ35410.1     2
 YQ22_05095   Maribacter sp. 1_2014MBL_MicDiv APA63740.1     1
 YQ22_05085   Maribacter sp. 1_2014MBL_MicDiv APA63738.1     1
 SAMN05192545_0155   Maribacter sp. MAR_2009_60 SDR79595.1     1
 SAMN05192545_0157   Maribacter sp. MAR_2009_60 SDR79704.1     1
 BTR34_05350   Maribacter sp. T28 APQ16778.1     1
 BTR34_05380   Maribacter sp. T28 APQ16784.1     1
 Mmar10_0255   Maricaulis maris MCS10 ABI64548.1 Q0AT39   1
 ALGA_3306   Marinifilaceae bacterium SPP2 BAX81606.1     1
 MROS_1361   Melioribacter roseus P3M-2 AFN74598.1     1
 MROS_1369   Melioribacter roseus P3M-2 AFN74606.1     2
 MEBOL_000524   Melittangium boletus DSM 14713 ATB27089.1     2
 Mag101_00425   Microbulbifer agarilyticus GP101 AQQ66283.1    
 A3224_00960   Microbulbifer thermotolerans DAU221 AMX01338.1     1
 A3224_00430   Microbulbifer thermotolerans DAU221 AMX03968.1     1
 A8C56_19485   Niabella ginsenosidivorans BS26 ANH82878.1     1
 A8C56_15745   Niabella ginsenosidivorans BS26 ANH82221.1     2
 A8C56_19480   Niabella ginsenosidivorans BS26 ANH82877.1     1
 NIASO_10845   Niabella soli DSM 19437 AHF15521.1     2
 Niako_0682   Niastella koreensis GR20-10 AEV97065.1     2
 Niako_3531   Niastella koreensis GR20-10 AEV99832.1     2
 Niako_4993   Niastella koreensis GR20-10 AEW01232.1     2
 Niako_5224   Niastella koreensis GR20-10 AEW01461.1     1
 Niako_0272 (fragment)   Niastella koreensis GR20-10 AEV96670.1    
 DDD_0327   Nonlabens dokdonensis DSW-6 AGC75453.1     1
 DDD_0353   Nonlabens dokdonensis DSW-6 AGC75480.1     1
 alginate lyase (Nonul_2381) 4.2.2.11
4.2.2.-
Nonlabens ulvanivorans PLR KEZ92913.1     1
 BES08_00045   Novosphingobium resinovorum SA1 AOR75325.1     1
 CW732_00380   Olleya sp. Bg11-27 AUC74215.1     1
 CW732_00360   Olleya sp. Bg11-27 AUC74212.1     1
 Oweho_2210   Owenweeksia hongkongensis DSM 17368 AEV33184.1     1
 PDUR_05170   Paenibacillus durus DSM 1735 AIQ11428.1     2
 alginate lyase (polyG-specific) (AlyGC) 4.2.2.11 Paraglaciecola chathamensis S18K6T WP_007984897.1   5GKD[A,B,C,D]
5GKQ[A,B]
1
 AY601_1657   Pedobacter cryoconitis PAMC 27485 AMP98572.1     1
 CPT03_04505   Pedobacter ginsengisoli T01R-27 ATP55779.1     1
 poly-(MG)-lyase / MG-specific alginate lyase (Phep_3223) 4.2.2.- Pedobacter heparinus DSM 2366 ACU05418.1 C6Y3X5   2
 chondroitinase B (CslB;ChnB;Phep_0789) 4.2.2.19 Pedobacter heparinus DSM 2366 ACU03011.1
AAC83384.1
AAE46726.1
ABC06960.1
ABJ38857.1
ACK03140.1
Q46079 1DBG[A]
1DBO[A]
1OFL[A]
1OFM[A]
1
 AQ505_11675   Pedobacter sp. PACM 27299 ALL06092.1     1
 AQ505_07330 (fragment)   Pedobacter sp. PACM 27299 ALL05317.1     1
 BFS30_18155   Pedobacter steynii DX4 AOM78923.1     1
 BFS30_00355   Pedobacter steynii DX4 AOM80550.1     1
 H744_1c1636   Photobacterium gaetbulicola Gung47 AJR06654.1    
 BW723_07340   Polaribacter reichenbachii 6Alg 8T APZ46122.1     1
 BW723_16235   Polaribacter reichenbachii 6Alg 8T APZ47749.1    
 BW723_07415   Polaribacter reichenbachii 6Alg 8T APZ48092.1     1
 BTO17_15360   Polaribacter reichenbachii KCTC 23969 AUC19984.1     1
 BTO17_06655   Polaribacter reichenbachii KCTC 23969 AUC18384.1    
 BTO17_15435   Polaribacter reichenbachii KCTC 23969 AUC20567.1     1
 BTO15_08225   Polaribacter sejongensis KCTC 23670 AUC22083.1     1
 BTO15_02870   Polaribacter sejongensis KCTC 23670 AUC21121.1    
 BTO15_08235   Polaribacter sejongensis KCTC 23670 AUC22085.1     1
 BXQ17_10060   Polaribacter sp. BM10 AQS94385.1     1
 BXQ17_10055   Polaribacter sp. BM10 AQS94384.1     1
 SAMN05216503_1875   Polaribacter sp. KT25b SDS06755.1     1
 SAMN05216503_1759   Polaribacter sp. KT25b SDS03320.1     1
 SAMN05216503_2579   Polaribacter sp. KT25b SDS28918.1     2
 MED152_03735 (Alya1)   Polaribacter sp. MED152 EAQ41795.1    
 MED152_08630 (AlyP)   Polaribacter sp. MED152 EAQ42774.2    
 MED152_09780 (Alya5)   Polaribacter sp. MED152 EAQ43004.1     1
 MED152_09875   Polaribacter sp. MED152 EAQ43023.1     1
 BTO07_14695   Polaribacter sp. SA4-12 ARV16314.1     1
 BTO07_14760   Polaribacter sp. SA4-12 ARV16326.1     1
 BTO07_11890   Polaribacter sp. SA4-12 ARV15795.1     1
 BTO07_13490   Polaribacter sp. SA4-12 ARV16093.1    
 LPB03_09645   Polaribacter vadi LPB0003 AOW17706.1     1
 LPB03_04285   Polaribacter vadi LPB0003 AOW16731.1    
 LPB03_09670   Polaribacter vadi LPB0003 AOW17711.1     1
 PAGA_a1382 (AlgL)   Pseudoalteromonas agarivorans DSM 14585 ATC81800.1     1
 PAGA_a1393   Pseudoalteromonas agarivorans DSM 14585 ATC81808.1     3
 PARC_a2610 (AlgL)   Pseudoalteromonas arctica A 37-1-2 ATC87080.1     1
 poly(α-L-guluronate) lyase / G-specific alginate lyase (Patl_3640) 4.2.2.11 Pseudoalteromonas atlantica T6c ABG42142.1 Q15PP6   1
 alginate lyase (Patl_3659) 4.2.2.11
4.2.2.-
Pseudoalteromonas atlantica T6c ABG42161.1 Q15PM7   1
 PCAR9_A20878   Pseudoalteromonas carrageenovora IAM 12662 ATCC 43555 SOU40437.1     3
 PCAR9_A20870   Pseudoalteromonas carrageenovora IAM 12662 ATCC 43555 SOU40429.1     1
 PESP_a2550 (AlgL)   Pseudoalteromonas espejiana ATCC 29659 ASM50505.1     1
 PESP_a2542   Pseudoalteromonas espejiana ATCC 29659 ASM50497.1     3
 PSHAa1749   Pseudoalteromonas haloplanktis TAC125 CAI86821.1 Q3IH78   1
 CPA52_10505   Pseudoalteromonas issachenkonii ECSMB14103 ATG59704.1     1
 CPA52_10465   Pseudoalteromonas issachenkonii ECSMB14103 ATG58642.1     3
 PI2015_1877 (fragment)   Pseudoalteromonas issachenkonii KCTC 12958 ALQ55164.1     3
 PI2015_1888   Pseudoalteromonas issachenkonii KCTC 12958 ALQ55173.1     1
 PI2015_1880 (fragment)   Pseudoalteromonas issachenkonii KCTC 12958 ALQ55165.1     3
 PISS_a2164 (fragment)   Pseudoalteromonas issachenkonii KMM 3549 ATC91007.1     3
 PISS_a2173 (AlgL)   Pseudoalteromonas issachenkonii KMM 3549 ATC91015.1     1
 PISS_a2162 (fragment)   Pseudoalteromonas issachenkonii KMM 3549 ATC91005.1     3
 ATS72_001530   Pseudoalteromonas sp. 13-15 AUL72353.1     3
 ATS72_001490   Pseudoalteromonas sp. 13-15 AUL74939.1     1
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