Polysaccharide Lyase Family 6

Activities in Familyalginate lyase (EC 4.2.2.3); chondroitinase B (EC 4.2.2.19); MG-specific alginate lyase (EC 4.2.2.-); poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11); oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26)
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia;
Statistics GenBank accession (732); Uniprot accession (22); PDB accession (18); 3D entries (9); cryst (0)
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3D Subf
 alginate lyase (MASE_04135) 4.2.2.11
4.2.2.-
pubmed
pubmed
Alteromonas macleodii ATCC 27126 AFS36376.1     1
 poly-(MG)-lyase / MG-specific alginate lyase (MASE_04180) 4.2.2.- pubmed
Alteromonas macleodii ATCC 27126 AFS36385.1     3
 BcelPL6 (BACCELL_05351) 4.2.2.3 pubmed
Bacteroides cellulosilyticus DSM 14838   E2NM07 6QPS[A,B]
 alginate lyase (Celly_0294) 4.2.2.11
4.2.2.-
pubmed
pubmed
Cellulophaga lytica DSM 7489 ADY28129.1 F0RHM0   1
 alginate lyase (Nonul_2381) 4.2.2.11
4.2.2.-
pubmed
pubmed
Nonlabens ulvanivorans PLR KEZ92913.1 A0A084JVC9   1
 alginate lyase (polyG-specific) (AlyGC) 4.2.2.11 pubmed
Paraglaciecola chathamensis S18K6T WP_007984897.1 A0A1S4NYD7
A0A1S4NYD8
A0A656LHA2
5GKD[A,B,C,D]
5GKQ[A,B]
1
 poly-(MG)-lyase / MG-specific alginate lyase (Phep_3223) 4.2.2.- pubmed
Pedobacter heparinus DSM 2366 ACU05418.1 C6Y3X5   2
 chondroitinase B (CslB;ChnB;Phep_0789) 4.2.2.19 pubmed
Pedobacter heparinus DSM 2366 ACU03011.1
AAC83384.1
AAE46726.1
ABC06960.1
ABJ38857.1
ACK03140.1
Q46079 1DBG[A]
1DBO[A]
1OFL[A]
1OFM[A]
 poly(α-L-guluronate) lyase / G-specific alginate lyase (Patl_3640) 4.2.2.11 pubmed
Pseudoalteromonas atlantica T6c ABG42142.1 Q15PP6 7O77[A]
7O7T[A]
1
 alginate lyase (Patl_3659) 4.2.2.11
4.2.2.-
pubmed
pubmed
Pseudoalteromonas atlantica T6c ABG42161.1 Q15PM7   1
 alginate lyase (AlyP) 4.2.2.3 pubmed
Pseudomonas sp. OS-ALG-9 BAA01182.1 Q06365   1
 poly(α-L-guluronate) lyase / G-specific alginate lyase (Pedsa_0631) 4.2.2.11 pubmed
Pseudopedobacter saltans DSM 12145 ADY51207.1 F0S7Y6   1
 chondroitinase B (Pedsa3807;Pedsa_3807) 4.2.2.19 pubmed
Pseudopedobacter saltans DSM 12145 ADY54336.1 F0S763 B[nd]
7O78[A]
 alginate lyase (Pedsa_0632) 4.2.2.11
4.2.2.-
pubmed
pubmed
Pseudopedobacter saltans DSM 12145 ADY51208.1 F0S7Y7 B[nd]
7O7A[A]
7O84[A]
1
 poly-(MG)-lyase / MG-specific alginate lyase (Pedsa_3628) 4.2.2.- pubmed
Pseudopedobacter saltans DSM 12145 ADY54157.1 F0S4Y3 7O79[A]
 alginate lyase (Rmar_1165) 4.2.2.11
4.2.2.-
pubmed
pubmed
Rhodothermus marinus DSM 4252 ACY48055.1 D0MHU7   1
 poly-(MG)-lyase / MG-specific alginate lyase (Rmar_1386) 4.2.2.- pubmed
Rhodothermus marinus DSM 4252 ACY48275.1 D0MIG7   2
 poly-(MG)-lyase / MG-specific alginate lyase (Sde_0034) 4.2.2.- pubmed
Saccharophagus degradans 2-40 ABD79298.1
ACK10568.1
Q21PT1   2
 oligoalginate lyase (polyG-block specific) (OalS6;AlgS6) 4.2.2.26 pubmed
Shewanella sp. Kz7 AHC69713.1 W8DQS7   1
 polyMG-specific alginate lyase (AlyMG) 4.2.2.- pubmed
Stenotrophomonas maltophilia KJ-2 / KCTC32000 AFC88009.1 I6P4V6   1
 poly-(MG)-lyase / MG-specific alginate lyase (SVEN_0074) 4.2.2.- pubmed
Streptomyces venezuelae ATCC 10712 CCA53362.1
QER97009.1
F2R485   2
 PolyG-specific alginate lyase 4.2.2.11 pubmed
Vibrio splendidus WP_116871951.1 A0A2S7V3I3 5Z9T[A,B]
6A40[A]
6ITG[A,B]
7BZ0[A]
Top


Last update: 2021-11-30 © Copyright 1998-2021
AFMB - CNRS - Université d'Aix-Marseille