Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 92 | 93 | 94 | 95 | 96 | 97 | 98 | 99 | 100 | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 K8O61_03130   Xanthomonas translucens pv. pistacia ICMP 16317 UKE70075.1    
 KM539_09450   Xanthomonas translucens pv. poae LMG 728 UKE63634.1    
 KM539_03530   Xanthomonas translucens pv. poae LMG 728 UKE62597.1    
 KAF26_12355   Xanthomonas translucens pv. secalis CFBP 2539 UKE42283.1    
 KAF26_03060   Xanthomonas translucens pv. secalis CFBP 2539 UKE44003.1    
 KBQ49_18885   Xanthomonas translucens pv. translucens CIX43 UNT98971.1    
 KBQ49_07120   Xanthomonas translucens pv. translucens CIX43 UNU00372.1    
 KBV71_10080   Xanthomonas translucens pv. translucens CIX95 UNU09709.1    
 RMA73_19505   Xanthomonas translucens pv. translucens CO236 WNJ26955.1    
 RMA73_08430   Xanthomonas translucens pv. translucens CO236 WNJ28580.1    
 BN444_00761 (Pgla2)   Xanthomonas translucens pv. translucens DSM 18974 SCB05238.1    
 BN444_02249 (Pgla1)   Xanthomonas translucens pv. translucens DSM 18974 SCB03493.1    
 ISN30_10690   Xanthomonas translucens pv. translucens Km7 QSQ28852.1    
 ISN30_19190   Xanthomonas translucens pv. translucens Km7 QSQ30281.1    
 ISN31_04535   Xanthomonas translucens pv. translucens Km8 QSQ34879.1    
 ISN31_19400   Xanthomonas translucens pv. translucens Km8 QSQ33913.1    
 ISN32_01260   Xanthomonas translucens pv. translucens Km9 QSQ38194.1    
 ISN32_10370   Xanthomonas translucens pv. translucens Km9 QSQ36323.1    
 ISN33_18790   Xanthomonas translucens pv. translucens XtKm33 QSQ41558.1    
 ISN33_14600   Xanthomonas translucens pv. translucens XtKm33 QSQ40837.1    
 ISN34_09975   Xanthomonas translucens pv. translucens XtKm34 QSQ47103.1    
 ISN34_18835   Xanthomonas translucens pv. translucens XtKm34 QSQ45173.1    
 WDV90_03195   Xanthomonas translucens pv. undulosa ARGTr 7-1 WXF84043.1    
 WDV90_07490   Xanthomonas translucens pv. undulosa ARGTr 7-1 WXF84766.1    
 KCU58_12715   Xanthomonas translucens pv. undulosa CFBP 2055 UKE38588.1    
 KCU58_03055   Xanthomonas translucens pv. undulosa CFBP 2055 UKE40305.1    
 RMA82_18335   Xanthomonas translucens pv. undulosa CO237 WNJ30667.1    
 RMA82_14065   Xanthomonas translucens pv. undulosa CO237 WNJ29904.1    
 NZ30_03130   Xanthomonas translucens pv. undulosa ICMP11055 AVY65396.1    
 F0H32_03160   Xanthomonas translucens pv. undulosa LW16 QEO25331.1    
 F0H32_07570   Xanthomonas translucens pv. undulosa LW16 QEO26068.1    
 LTC53_07640   Xanthomonas translucens pv. undulosa MAI5034 UJB16495.1    
 LTC53_03245   Xanthomonas translucens pv. undulosa MAI5034 UJB15711.1    
 F0H33_07365   Xanthomonas translucens pv. undulosa P3 QEN93222.1    
 F0H33_03115   Xanthomonas translucens pv. undulosa P3 QEN92501.1    
 ISN37_01160   Xanthomonas translucens pv. undulosa XtFa1 QSQ56720.1    
 ISN37_10805   Xanthomonas translucens pv. undulosa XtFa1 QSQ55003.1    
 ISN35_12840   Xanthomonas translucens pv. undulosa XtKm12 QSQ47968.1    
 ISN35_08650   Xanthomonas translucens pv. undulosa XtKm12 QSQ50569.1    
 ISN36_01180   Xanthomonas translucens pv. undulosa XtKm15 QSQ52959.1    
 ISN36_05320   Xanthomonas translucens pv. undulosa XtKm15 QSQ53669.1    
 ISN38_07065   Xanthomonas translucens pv. undulosa XtLr8 QSQ61430.1    
 ISN38_02915   Xanthomonas translucens pv. undulosa XtLr8 QSQ60712.1    
 FD63_07380   Xanthomonas translucens pv. undulosa Xtu 4699 AKK67317.1    
 FD63_03115   Xanthomonas translucens pv. undulosa Xtu 4699 AKK66540.1    
 MZO50_16000   Xanthomonas translucens pv. undulosa Xtu-UPB513 UPU48208.1    
 MZO50_20265   Xanthomonas translucens pv. undulosa Xtu-UPB513 UPU48976.1    
 NX08_003425   Xanthomonas vasicola NCPPB 902 AZR33676.1    
 NX80_017920   Xanthomonas vasicola pv. arecae NCPPB 2649 AZR28027.1    
 C7V42_03625   Xanthomonas vasicola pv. vasculorum SAM119 AVQ05848.1    
 CXP37_03630   Xanthomonas vasicola pv. vasculorum Xv1601 AZM70047.1    
 BJD12_16155   Xanthomonas vesicatoria ATCC 35937 LMG 911 APP76499.1    
 BJD12_02905   Xanthomonas vesicatoria ATCC 35937 LMG 911 APP74380.1    
 BI313_05615   Xanthomonas vesicatoria LM159 APO97221.1    
 BI313_19075   Xanthomonas vesicatoria LM159 APO96398.1    
 M9189_03920   Alkaliflexus sp. Ai-910 URW80498.1    
 PRU_1469   Xylanibacter ruminicola 23 ADE81705.1    
 PRU_2609   Xylanibacter ruminicola 23 ADE82966.1    
 PRU_2760   Xylanibacter ruminicola 23 ADE81493.1    
 PRU_1461   Xylanibacter ruminicola 23 ADE82894.1    
 PRU_2307   Xylanibacter ruminicola 23 ADE83743.1    
 J4031_09445   Xylanibacter ruminicola KHP1 QVJ79933.1    
 J4031_07190   Xylanibacter ruminicola KHP1 QVJ82239.1    
 J4031_08005   Xylanibacter ruminicola KHP1 QVJ79670.1    
 J4031_13420   Xylanibacter ruminicola KHP1 QVJ80657.1    
 J4031_13380   Xylanibacter ruminicola KHP1 QVJ82320.1    
 polygalacturonase (fragment)   Xylanibacter ruminicola T31 BAA78557.1    
 Xcel_2532   Xylanimonas cellulosilytica DSM 15894 ACZ31547.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa AlmaReb1 QNI22097.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa AlmaReb2 QNI22098.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa AlmaReb3 QNI22099.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa AlmaStar1 QNI22100.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa AlmaStar2 QNI22101.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa AlmaStar3 QNI22102.1    
 F7G16_04850   Xylella fastidiosa ATCC 35879 QIS25593.1    
 RO838_07830   Xylella fastidiosa CFBP8478 WNY20683.1    
 RO839_07810   Xylella fastidiosa CO33 WNY18395.1    
 XFHB_02820   Xylella fastidiosa Hib4 ALR05957.1    
 PXH81_08125   Xylella fastidiosa ICMP 15197 WDV82384.1    
 PT013_07385   Xylella fastidiosa ICMP 8731 WDF08523.1    
 PT012_07800   Xylella fastidiosa ICMP 8740 WDF06372.1    
 PUO95_04575   Xylella fastidiosa ICMP 8742 WDF01558.1    
 Xfasm12_1628   Xylella fastidiosa M12 ACA12537.1    
 XfasM23_1570   Xylella fastidiosa M23 ACB92978.1    
 P303_07170   Xylella fastidiosa MUL0034 AIC12727.1    
 polygalacturonase precursor, partial (PglA) (fragment)   Xylella fastidiosa PierceMed1 QNI22103.1    
 XFPR_02855   Xylella fastidiosa Pr8x ALR03736.1    
 BCV75_02530   Xylella fastidiosa Salento-1 AVI20274.1    
 BC375_02550   Xylella fastidiosa Salento-2 AVI22278.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa 3SV-G AEX88242.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Alpha 3 AEX88243.1    
 FG899_08345   Xylella fastidiosa subsp. fastidiosa Bakersfield-1 QID15670.1    
 IUD21_08020   Xylella fastidiosa subsp. fastidiosa Bakersfield-11 QPC08084.1    
 IUD22_07865   Xylella fastidiosa subsp. fastidiosa Bakersfield-13 QPC05916.1    
 IUD25_07875   Xylella fastidiosa subsp. fastidiosa Bakersfield-14 QPC03770.1    
 IUD20_08000   Xylella fastidiosa subsp. fastidiosa Bakersfield-8 QPC10261.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa CC Cab 1 AEX88244.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa CC PM 1 AEX88264.1    
 OK117_08040   Xylella fastidiosa subsp. fastidiosa CFBP8073 WCF27593.1    
 OK113_07815   Xylella fastidiosa subsp. fastidiosa CFBP8083 WCF23313.1    
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