Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 55 | 56 | 57 | 58 | 59 | 60 | 61 | 62 | 63 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 NQ564_16730   Parabacteroides johnsonii DSM 18315 UWP42531.1    
 NQ564_16715   Parabacteroides johnsonii DSM 18315 UWP44884.1    
 NQ564_16720 (fragment)   Parabacteroides johnsonii DSM 18315 UWP42529.1    
 NQ542_15485   Parabacteroides merdae ATCC 43184 UWP46117.1    
 NQ542_15470   Parabacteroides merdae ATCC 43184 UWP48295.1    
 NQ542_15475 (fragment)   Parabacteroides merdae ATCC 43184 UWP46115.1    
 PARMER_00599 (fragment)   Parabacteroides merdae ATCC 43184 EDN88021.1   4MXN[A,B,C,D]
 K6V24_12075 (fragment)   Parabacteroides merdae BFG-280 UBD60222.1    
 K6V24_12085   Parabacteroides merdae BFG-280 UBD60224.1    
 INE87_02367   Parabacteroides merdae CL06T03C08 QUT49879.1    
 INE87_02369 (fragment)   Parabacteroides merdae CL06T03C08 QUT49881.1    
 INE87_02370   Parabacteroides merdae CL06T03C08 QUT49882.1    
 FAZ97_26825   Paraburkholderia acidiphila 7Q-K02 QGZ59247.1    
 FAZ98_07325   Paraburkholderia acidisoli DHF22 QGZ61560.1    
 CJU94_20700   Paraburkholderia aromaticivorans ASW00677.1    
 NDK50_30385   Paraburkholderia bryophila CA002 WCM22327.1    
 CUJ87_19440   Paraburkholderia caledonica PHRS4 AXF16619.1    
 A9O66_00810   Paraburkholderia caribensis 852011 QLB63779.1    
 A9O66_16305   Paraburkholderia caribensis 852011 QLB66268.1    
 ATN79_26140   Paraburkholderia caribensis Bcrs1W AMV45424.1    
 ATN79_08515   Paraburkholderia caribensis Bcrs1W AMV42715.1    
 C2L66_22015   Paraburkholderia caribensis DSM 13236 AUT55929.1    
 C2L66_08160   Paraburkholderia caribensis DSM 13236 AUT53423.1    
 K788_0007981   Paraburkholderia caribensis MBA4 ALL65137.1    
 K788_0002897   Paraburkholderia caribensis MBA4 ALL66381.1    
 AN416_16580   Paraburkholderia caribensis MWAP64 ALP66483.1    
 AN416_10225   Paraburkholderia caribensis MWAP64 ALP64157.1    
 CUJ91_25855   Paraburkholderia graminis PHS1 AXF11297.1    
 C2L64_08970   Paraburkholderia hospita DSM 17164 AUT68439.1    
 C2L64_25485   Paraburkholderia hospita DSM 17164 AUT71610.1    
 CUJ88_08950 (fragment)   Paraburkholderia hospita mHSR1 AXE98579.1    
 CUJ88_30200   Paraburkholderia hospita mHSR1 AXF02566.1    
 RW095_09350   Paraburkholderia kirstenboschensis F3 WOD16137.1    
 U0042_27720   Paraburkholderia kururiensis HAMBI 2494 WQD81183.1    
 BUPH_06167   Paraburkholderia phenoliruptrix BR3459a AFT89586.1    
 P3F88_26700   Paraburkholderia phenoliruptrix T36S-14 WMY10308.1    
 Bphyt_4858   Paraburkholderia phytofirmans PsJN ACD19223.1    
 QEN71_32165   Paraburkholderia sabiae LMG 24235 WJZ78642.1    
 PBP221_46020   Paraburkholderia sp. 22B1P BEU24462.1    
 PBP221_17830   Paraburkholderia sp. 22B1P BEU21643.1    
 BC1002_6358   Paraburkholderia sp. CCGE1002 ADG20215.1    
 PPGUF2_36430   Paraburkholderia sp. F2 BEI69427.1    
 PPGUF2_17110   Paraburkholderia sp. F2 BEI67495.1    
 RI103_27465   Paraburkholderia sp. FT54 WNC92025.1    
 PPGU16_37370   Paraburkholderia sp. PGU16 BCF90670.1    
 PPGU16_16180 (PglA)   Paraburkholderia sp. PGU16 BCF88551.1    
 PPGU19_018630 (fragment)   Paraburkholderia sp. PGU19 BCF97294.1    
 PPGU19_042310   Paraburkholderia sp. PGU19 BCF99662.1    
 BJG93_30325   Paraburkholderia sprentiae WSM5005 APA89766.1    
 BJG93_23895   Paraburkholderia sprentiae WSM5005 APA88410.1
APA88410.2
   
 BJG93_31020   Paraburkholderia sprentiae WSM5005 APA89883.1    
 BJG93_24245   Paraburkholderia sprentiae WSM5005 APA88467.2
APA88467.1
   
 BJG93_31945   Paraburkholderia sprentiae WSM5005 APA90033.1    
 C2L65_08435   Paraburkholderia terrae DSM 17804 AUT59617.1    
 C2L65_22900   Paraburkholderia terrae DSM 17804 AUT62473.1    
 PTKU15_17510 (PglA)   Paraburkholderia terrae KU-15 BDC38454.1    
 PTKU15_55010   Paraburkholderia terrae KU-15 BDC42204.1    
 PTKU46_16320   Paraburkholderia terrae KU-46 BFG73599.1    
 PTKU46_45030   Paraburkholderia terrae KU-46 BFG76470.1    
 PTKU64_58370   Paraburkholderia terrae KU-64 BCZ82162.1    
 PTKU64_16370 (PglA)   Paraburkholderia terrae KU-64 BCZ77962.1    
 CUJ90_18835   Paraburkholderia terricola mHS1 AXE94501.1    
 CUJ90_29680   Paraburkholderia terricola mHS1 AXE96350.1    
 G5S35_19270   Paraburkholderia tropica IAC135 QNB13723.1    
 BN85308510   Paracholeplasma brassicae O502 CCV65872.1    
 E4191_23360   Paracoccus liaowanqingii 2251 QDA36975.1    
 LOS78_01595   Paracoccus sp. MA UFM64193.1    
 CUV01_14005   Paracoccus tegillarcae BM15 AUH34349.1    
 D3H65_17445   Paraflavitalea soli 5GH32-13 AXY78686.1    
 D3H65_09720   Paraflavitalea soli 5GH32-13 AXY78586.1    
 D3H65_06260   Paraflavitalea soli 5GH32-13 AXY73609.1    
 D3H65_17470   Paraflavitalea soli 5GH32-13 AXY75655.1    
 D3H65_02705   Paraflavitalea soli 5GH32-13 AXY72941.1    
 D3H65_04220   Paraflavitalea soli 5GH32-13 AXY73228.1    
 GCM10025865_15980 (fragment)   Paraoerskovia sediminicola NBRC 108565 BDZ42299.1    
 GCM10025865_15990 (fragment)   Paraoerskovia sediminicola NBRC 108565 BDZ42300.1    
 PC1C4_25120   Paraprevotella clara 1C4 BDI75790.1    
 PC1C4_16030   Paraprevotella clara 1C4 BDI74881.1    
 PC1C4_13090   Paraprevotella clara 1C4 BDI74587.1    
 Spico_0039   Parasphaerochaeta coccoides DSM 17374 AEC01281.1    
 LOOC260_105820   Paucilactobacillus hokkaidonensis JCM 18461 BAP85139.1    
 LOOC260_120880   Paucilactobacillus hokkaidonensis JCM 18461 BAP86594.1    
 PCO84_21655   Pectobacteriaceae bacterium C111 WJV58072.1    
 PCO80_20890   Pectobacteriaceae bacterium C80 WJY10672.1    
 PCO86_20940   Pectobacteriaceae bacterium CE70 WJV66675.1    
 PCO82_00850   Pectobacteriaceae bacterium CE90 WJY15309.1    
 M9782_08020   Pectobacterium actinidiae GX-Pa1 WEF13205.1    
 M9782_07530   Pectobacterium actinidiae GX-Pa1 WEF13113.1    
 M9782_19270   Pectobacterium actinidiae GX-Pa1 WEF11273.1    
 M9782_16940   Pectobacterium actinidiae GX-Pa1 WEF10870.1    
 DMB82_0007000   Pectobacterium aquaticum A212-S19-A16 UEM40716.1    
 DMB82_0014910   Pectobacterium aquaticum A212-S19-A16 UEM38440.1    
 DMB82_0004555   Pectobacterium aquaticum A212-S19-A16 UEM40306.1    
 PEC302110_10700   Pectobacterium sp. MAFF 302110 BES83973.1    
 PEC302110_31330   Pectobacterium sp. MAFF 302110 BES86036.1    
 PEC302110_27100   Pectobacterium sp. MAFF 302110 BES85613.1    
 L0Y25_06945   Pectobacterium aroidearum AK042 UUE42022.1    
 L0Y25_04730   Pectobacterium aroidearum AK042 UUE41637.1    
 L0Y25_11945   Pectobacterium aroidearum AK042 UUE38807.1    
 L0Y25_17125   Pectobacterium aroidearum AK042 UUE39743.1    
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