Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 45 | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 GHC38_07025   Kluyvera intermedia HR2 QGH38418.1    
 GHC38_18815   Kluyvera intermedia HR2 QGH40580.1    
 GHC38_07295   Kluyvera intermedia HR2 QGH38470.1    
 GHC21_18815   Kluyvera intermedia N2-1 QGH31598.1    
 GHC21_07295   Kluyvera intermedia N2-1 QGH29488.1    
 GHC21_07025   Kluyvera intermedia N2-1 QGH29436.1    
 NCTC12125_03115 (Pehx_3) (fragment)   Kluyvera intermedia NCTC12125 VDZ84968.1    
 NCTC12125_00527 (PehA)   Kluyvera intermedia NCTC12125 VDZ82479.1    
 NCTC12125_00461 (Pehx_1)   Kluyvera intermedia NCTC12125 VDZ82413.1    
 NCTC12125_03114 (Pehx_2) (fragment)   Kluyvera intermedia NCTC12125 VDZ84967.1    
 MRY16398_01080 (fragment)   [Kluyvera] intestini MRY16-398 BBE75052.1    
 K7B04_21690   Kluyvera sp. CRP UAK19852.1    
 K7B04_01900   Kluyvera sp. CRP UAK20689.1    
 K7B04_21370   Kluyvera sp. CRP UAK19790.1    
 GY169_20475   Kluyvera sp. PO2S7 QIR29034.1    
 GY169_08055   Kluyvera sp. PO2S7 QIR26774.1    
 GY169_07735   Kluyvera sp. PO2S7 QIR26714.1    
 S101446_01872   Komagataeibacter europaeus SRCM101446 ARW16989.1    
 H845_2563   Komagataeibacter xylinus E25 AHI26485.1    
 SAMN05216168_3723   Kosakonia oryzae D4 SKC21613.1    
 I5186_11525 (fragment)   Kosakonia oryzae IAC-BECa90 UDJ84659.1    
 AWR26_11435 (fragment)   Kosakonia oryzae Ola 51 ANI82740.2
ANI82740.1
   
 O9K67_04360   Kosakonia oryzendophytica FY-07 WBT59038.1    
 IP581_08285 (fragment)   Kosakonia pseudosacchari BDA62-3 QOV66305.1    
 PF050_15030 (fragment)   Kosakonia pseudosacchari RX.G5M8 WBU47790.1    
 PF050_15025 (fragment)   Kosakonia pseudosacchari RX.G5M8 WBU51682.1    
 FEI17_12210   Kosakonia radicincitans DSM 107547 QEM91350.1    
 Y71_11670 (fragment)   Kosakonia radicincitans DSM 16656 ARD60550.1    
 A3780_12645 (fragment)   Kosakonia radicincitans GXGL-4A APG18361.1    
 BBB57_06225 (fragment)   Kosakonia sacchari BO-1 ANR80992.1    
 FGE25_14905 (fragment)   Kosakonia sacchari DSM 107661 QHM97213.1    
 Q8Y70_14810   Kosakonia sacchari KS2022 WOZ75876.1    
 C813_06280   Kosakonia sacchari SP1 AHJ74398.1
AHJ74398.2
   
 N7922_15545   Kosakonia sp. ML.JS2a UXY09291.1    
 N7922_04455   Kosakonia sp. ML.JS2a UXY11792.1    
 C0557_13675 (fragment)   Kosakonia sp. MUSA4 QJT81044.1    
 Kfla_4974   Kribbella flavida DSM 17836 ADB33990.1    
 GXN75_04680   Kroppenstedtia eburnea DSM 45196 QKI81348.1    
 KALB_1308   Kutzneria albida DSM 43870 AHH94681.1    
 Q4V64_27765   Kutzneria buriramensis DSM 45791 WKX11104.1    
 Q4V64_09700 (fragment)   Kutzneria buriramensis DSM 45791 WKX07736.1    
 Q4V64_40855   Kutzneria buriramensis DSM 45791 WKX13543.1    
 JJ691_07310   Kutzneria sp. CA-103260 QUQ63019.1    
 JJ691_61810   Kutzneria sp. CA-103260 QUQ68436.1    
 JJ691_31120   Kutzneria sp. CA-103260 QUQ65389.1    
 JJ691_31890   Kutzneria sp. CA-103260 QUQ65466.1    
 JJ691_29710   Kutzneria sp. CA-103260 QUQ65249.1    
 JJ691_31880   Kutzneria sp. CA-103260 QUQ65465.1    
 ALGA_2825   Labilibaculum antarcticum SPP2 BAX81132.1    
 ALGA_2830   Labilibaculum antarcticum SPP2 BAX81137.1    
 QJR73_09695   Lachnoanaerobaculum gingivalis SHL-20230108WGSARO1-L360107582 WHE86553.1    
 Cphy_1711   Lachnoclostridium phytofermentans ISDg ABX42083.1    
 Cphy_2567   Lachnoclostridium phytofermentans ISDg ABX42928.1    
 Cphy_2736   Lachnoclostridium phytofermentans ISDg ABX43097.1    
 Cphy_3217   Lachnoclostridium phytofermentans ISDg ABX43571.1    
 Cphy_3310   Lachnoclostridium phytofermentans ISDg ABX43664.1    
 A4V08_08945   Lachnoclostridium sp. YL32 ANU45921.1    
 A4V08_18765   Lachnoclostridium sp. YL32 ANU47529.1    
 A4V08_08395 (fragment)   Lachnoclostridium sp. YL32 ANU50407.2    
 CE91St56_50850   Lachnospiraceae bacterium CE91-St56 BDF47962.1    
 CE91St56_40110   Lachnospiraceae bacterium CE91-St56 BDF46888.1    
 CE91St56_49960   Lachnospiraceae bacterium CE91-St56 BDF47873.1    
 CE91St56_50250   Lachnospiraceae bacterium CE91-St56 BDF47902.1    
 CE91St56_36620   Lachnospiraceae bacterium CE91-St56 BDF46539.1    
 CE91St56_60600   Lachnospiraceae bacterium CE91-St56 BDF48937.1    
 C3V36_00625   Lachnospiraceae bacterium oral taxon 500 W11650 AVM67897.1    
 H4075_05570   Lacibacter sediminis S13-6-22 QNA45669.1    
 H4075_11275   Lacibacter sediminis S13-6-22 QNA46761.1    
 H4075_19675   Lacibacter sediminis S13-6-22 QNA44259.1    
 H4075_11225   Lacibacter sediminis S13-6-22 QNA42680.1    
 H4075_15325   Lacibacter sediminis S13-6-22 QNA43446.1    
 AT746_02825   Lacimicrobium alkaliphilum YelD216 ALS97308.1    
 AT746_02875   Lacimicrobium alkaliphilum YelD216 ALS97317.1    
 OW255_01925   Lacrimispora xylanolytica sy1 WAJ24302.1    
 OW255_14750   Lacrimispora xylanolytica sy1 WAJ22820.1    
 OW255_17180   Lacrimispora xylanolytica sy1 WAJ23280.1    
 MU539_12380   Lacticaseibacillus rhamnosus VHProbi M14 UUT38187.1    
 CK401_01774   Lactiplantibacillus paraplantarum CK401 QJU50879.1    
 CK401_01779   Lactiplantibacillus paraplantarum CK401 QJU50884.1    
 L3503_08635   Lactiplantibacillus paraplantarum KCCM 11826P UKB40379.1    
 L3503_08610   Lactiplantibacillus paraplantarum KCCM 11826P UKB40374.1    
 CEW82_08750   Lactiplantibacillus pentosus SLC13 ASG79930.1    
 CEW82_08725   Lactiplantibacillus pentosus SLC13 ASG79925.1    
 CEW82_08325   Lactiplantibacillus pentosus SLC13 ASG79845.1    
 GYM68_03225   Lactobacillus panisapium ESL0409 QYN58307.1    
 GYM71_03415   Lactobacillus panisapium ESL0416 QYN52503.1    
 OZX76_09505   Lactobacillus sp. ESL0677 WEV36955.1    
 OZX56_08830   Lactobacillus sp. ESL0684 WEV43592.1    
 OZX63_09075   Lactobacillus sp. ESL0700 WEV51087.1    
 OZX69_09075   Lactobacillus sp. ESL0731 WEV62216.1    
 BFR49_10995   Lactococcus lactis subsp. lactis WFLU12 ASX25186.1    
 Verru16b_01419   Lacunisphaera limnophila IG16b AOS44358.1    
 Verru16b_01547 (Yter_3)   Lacunisphaera limnophila IG16b AOS44485.1    
 C0213_04370 (fragment)   Latilactobacillus sakei DS4 AUX11668.1    
 C0213_04590   Latilactobacillus sakei DS4 AUX11711.1    
 C0213_04405   Latilactobacillus sakei DS4 AUX11674.1    
 QBD03_04365   Latilactobacillus sakei HUP1 WGI19950.1    
 QBD03_04610   Latilactobacillus sakei HUP1 WGI19995.1    
 V4U93_04155   Latilactobacillus sakei subsp. sakei DCF0720 WVZ28760.1    
 NC516_04165   Latilactobacillus sakei WiKim0095 USS39426.1    
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