Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18584); Uniprot accession (178); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | ... | 99 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 J4558_02845   Leptolyngbya sp. 15MV QYU69099.1    
 CT113_08130   Levilactobacillus brevis BDGP6 ATU70298.1    
 L747_13085 (fragment)   Levilactobacillus brevis BSO 464 AJA81406.1    
 KB236_09325   Levilactobacillus brevis M10 UIF30336.1    
 AZI11_00840   Levilactobacillus brevis TMW 1.2108 ARN91548.1    
 AZI12_00850 (fragment)   Levilactobacillus brevis TMW 1.2111 ARN94290.1    
 AZI12_00845 (fragment)   Levilactobacillus brevis TMW 1.2111 ARN94289.1    
 AZI09_11530   Levilactobacillus brevis TMW 1.2112 ARN91022.1    
 AZI10_11890   Levilactobacillus brevis TMW 1.2113 ARN98652.1    
 UCCLBBS449_2410 (fragment)   Levilactobacillus brevis UCCLBBS449 QCZ54316.1    
 CCS05_01010   Levilactobacillus brevis ZLB004 AWP45600.1    
 LZ395_11900 (fragment)   Levilactobacillus zymae LZ395 QFR62195.1    
 LZ395_11300   Levilactobacillus zymae LZ395 QFR62080.1    
 SMSP2_00585 (PehX)   Limihaloglobus sulfuriphilus SM-Chi-D1 AQQ70242.1    
 VLY81_10240   Limnochorda sp. LNt WRP13811.1    
 OP867_10430   Limosilactobacillus fermentum BRD_L14 UZM85241.1    
 LF130101_2050   Limosilactobacillus fermentum IMDO 130101 SNX32508.1    
 NX839_06565   Limosilactobacillus fermentum JNU 532 UVW02817.1    
 QRA02_09320   Limosilactobacillus fermentum KUFM407 WJD38791.1    
 P0M30_09310   Limosilactobacillus fermentum MSK408 WEN05283.1    
 P0N62_09320   Limosilactobacillus fermentum SRP423 WEN12137.1    
 CKQ53_04220   Lonsdalea britannica 477 AXW86263.1    
 I6N93_00885   Lonsdalea populi N-5-1 QPQ24407.1    
 PehX   Lonsdalea populi N-5-1 AID55362.1    
 KDY119_03537 (PehX)   Luteimicrobium xylanilyticum HY-24 QFV00002.1    
 KDY119_03538 (YteR)   Luteimicrobium xylanilyticum HY-24 QFV00003.1    
 llg_31140 (fragment)   Luteolibacter sp. LG18 BCU78399.1    
 llg_31130   Luteolibacter sp. LG18 BCU78398.1    
 OVA24_21285   Luteolibacter sp. SL250 WAC19754.1    
 BI350_14430   Lysinibacillus sphaericus LMG 22257 AOV08612.1    
 RBH95_01630   Mangrovimonas sp. YM274 WMI69085.1    
 RBH95_01585   Mangrovimonas sp. YM274 WMI69076.1    
 YQ22_02085   Maribacter sp. 1_2014MBL_MicDiv APA66227.1    
 SAMN05192545_0712   Maribacter sp. MAR_2009_60 SDS06655.1    
 GM418_05135   Maribellus comscasis WC007 QGY48047.1    
 GM418_28250   Maribellus comscasis WC007 QGY47418.1    
 GM418_16435   Maribellus comscasis WC007 QGY45203.1    
 GM418_28255   Maribellus comscasis WC007 QGY47419.1    
 GM418_27620   Maribellus comscasis WC007 QGY47298.1    
 GM418_09960   Maribellus comscasis WC007 QGY43969.1    
 GM418_18510   Maribellus comscasis WC007 QGY45590.1    
 MARGE09_P2822   Marinagarivorans cellulosilyticus GE09 BCD98621.1    
 CJ739_3641   Mariniflexile sp. TRM1-10 AXP82703.1    
 CJ739_1045   Mariniflexile sp. TRM1-10 AXP80138.1    
 CJ739_954   Mariniflexile sp. TRM1-10 AXP80047.1    
 CJ739_1011   Mariniflexile sp. TRM1-10 AXP80104.1    
 CJ739_1040   Mariniflexile sp. TRM1-10 AXP80133.1    
 CJ739_3729   Mariniflexile sp. TRM1-10 AXP82789.1    
 CJ739_2029   Mariniflexile sp. TRM1-10 AXP81112.1    
 CJ739_1068   Mariniflexile sp. TRM1-10 AXP80161.1    
 CJ739_1056   Mariniflexile sp. TRM1-10 AXP80149.1    
 OOT55_16250   Marinimicrobium koreense C6131 UZJ44192.1    
 OOT55_09290   Marinimicrobium koreense C6131 UZJ42849.1    
 OOT55_07530   Marinimicrobium koreense C6131 UZJ45893.1    
 TM49_08515   Martelella endophytica YC6887 AJY45716.1    
 JET14_10115   Martelella lutilitoris ZRK001 QQM32461.1    
 AZF01_09440   Martelella sp. AD-3 AMM84550.1    
 IV454_20400   Massilia antarctica P9640 QPI47921.1    
 IV454_26190   Massilia antarctica P9640 QPI53441.1    
 LSQ66_17570   Massilia endophytica DM-R-R2A-13 UGQ45583.1    
 LSQ66_17565   Massilia endophytica DM-R-R2A-13 UGQ45582.1    
 HH212_22490   Massilia forsythiae GN2-R2 QJE02449.1    
 HH212_18935   Massilia forsythiae GN2-R2 QJE03462.1    
 HH212_18930   Massilia forsythiae GN2-R2 QJE01841.1    
 HH212_21450   Massilia forsythiae GN2-R2 QJE02270.1    
 HH212_03945   Massilia forsythiae GN2-R2 QJD99290.1    
 LPB04_16830   Massilia litorea LPB0304 QOL48616.1    
 G4G28_13335   Massilia sp. Dwa41.01b QNA89201.1    
 KY496_06010   Massilia sp. NP310 QYG02958.1    
 KY496_06715   Massilia sp. NP310 QYG03087.1    
 G4G31_16885   Massilia sp. Se16.2.3 QNB00100.1    
 IM543_21920   Massilia sp. UMI-21 QOY94119.1    
 IM543_09800   Massilia sp. UMI-21 QOY96090.1    
 DPH57_24285   Massilia sp. YMA4 AXA94889.1    
 DPH57_13640   Massilia sp. YMA4 AXA94717.1    
 DIR46_25240   Massilia timonae CCUG 43427 AWL07407.1    
 MasN3_46870   Massilia varians N-3 BDT61193.1    
 MasN3_30050   Massilia varians N-3 BDT59511.1    
 MasN3_46750   Massilia varians N-3 BDT61181.1    
 CR152_27370   Massilia violaceinigra B2 ATQ77805.1    
 CR152_21860   Massilia violaceinigra B2 ATQ79040.1    
 INH39_23865   Massilia violaceinigra sipir UOD28465.1    
 RGna_00720 (fragment)   Mediterraneibacter gnavus ATCC 29149 QHB22131.1    
 RGna_00715   Mediterraneibacter gnavus ATCC 29149 QHB22130.1    
 NQ566_05560   Mediterraneibacter gnavus ATCC 29149 UWP63920.1    
 NQ566_05565 (fragment)   Mediterraneibacter gnavus ATCC 29149 UWP63921.1    
 FXV78_13105 (fragment)   Mediterraneibacter gnavus ATCC 29149 JCM6515 QEI32797.1    
 FXV78_13100   Mediterraneibacter gnavus ATCC 29149 JCM6515 QEI32796.1    
 MYB93_05540 (fragment)   Mediterraneibacter gnavus CC55_001C WIH32175.1    
 MYB93_05535   Mediterraneibacter gnavus CC55_001C WIH32174.1    
 I6K72_05475 (fragment)   Mediterraneibacter gnavus FDAARGOS_1342 QRT31279.1    
 I6K72_05470   Mediterraneibacter gnavus FDAARGOS_1342 QRT31278.1    
 ORL61_15325 (fragment)   Mediterraneibacter gnavus JCM6515 UZT24470.1    
 ORL61_15330   Mediterraneibacter gnavus JCM6515 UZT24471.1    
 ORL52_13225 (fragment)   Mediterraneibacter gnavus JCM6515 UZT20579.1    
 ORL52_13220   Mediterraneibacter gnavus JCM6515 UZT20578.1    
 LCQ72_17940   Mediterraneibacter gnavus NBRC 114413 UBS45886.1    
 MROS_0073   Melioribacter roseus P3M-2 AFN73317.1    
 MROS_2351 (probable fragment)   Melioribacter roseus P3M-2 AFN75581.1    
 MROS_2607   Melioribacter roseus P3M-2 AFN75837.1    
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