Glycoside Hydrolase Family 13 / Subf 13

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); amino acid transporter; [retaining] sucrose 6(F)-phosphate phosphorylase (EC 2.4.1.329); [retaining] glucosylglycerol phosphorylase (EC 2.4.1.359);
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1402); Uniprot accession (87); PDB accession (26); 3D entries (4); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 13 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 AVL56_10720   Alteromonas addita R10SW13 AMJ96551.1     13
 EP12_09770   Alteromonas australica DE170 AJP43907.1     13
 EP13_09605   Alteromonas australica H 17 AIF98912.1     13
 MASE_09140   Alteromonas macleodii ATCC 27126 AFS37359.1     13
 AVL55_09635   Alteromonas macleodii D7 AMK00388.1     13
 ACZ81_09830   Alteromonas macleodii HOT1A3 AMN13811.1     13
 AMBAS45_09695   Alteromonas macleodii str. Balearic Sea AD45 AFT95410.1     13
 AMBLS11_08945   Alteromonas macleodii str. Black Sea 11 AFT78370.1     13
 AMEC673_09470   Alteromonas macleodii str. English Channel 673 AFT74588.1     13
 TE101_09560   Alteromonas macleodii Te101 AUI84544.1     13
 BM523_08890   Alteromonas mediterranea AR43 APD95966.1     13
 BM524_08985   Alteromonas mediterranea CP48 APD91751.1     13
 BM525_08960   Alteromonas mediterranea CP49 APD99602.1     13
 MADE_01882   Alteromonas mediterranea DE ACG66186.1
AEA98044.1
B4RYG7   13
 amad1_10335   Alteromonas mediterranea DE1 AFV85574.1     13
 I533_09500   Alteromonas mediterranea MED64 AGP81870.1     13
 FJN13_08705   Alteromonas mediterranea PT11 QDG34867.1     13
 FJN14_08540   Alteromonas mediterranea PT15 QDG38488.1     13
 BM526_09060   Alteromonas mediterranea RG65 APE03846.1     13
 AV941_10220   Alteromonas mediterranea U10 AMJ84729.1     13
 I607_09185   Alteromonas mediterranea U4 AGP85632.1     13
 I876_09545   Alteromonas mediterranea U7 AGP89770.1     13
 I634_09625   Alteromonas mediterranea U8 AGP93638.1     13
 I636_09935   Alteromonas mediterranea UM4b AGQ01839.1     13
 I635_10330   Alteromonas mediterranea UM7 AGP97586.1     13
 AV942_10185   Alteromonas mediterranea UM8 AMJ80567.1     13
 ambt_07630   Alteromonas naphthalenivorans AEF03054.1     13
 ALT761_02143   Alteromonas sp. 76-1 VEL97143.1     13
 D1814_17790   Alteromonas sp. BL110 AXT40402.1     13
 AV939_10590   Alteromonas sp. Mac1 AMJ88839.1     13
 AV940_10360   Alteromonas sp. Mac2 AMJ92690.1     13
 CW735_08025   Alteromonas sp. MB-3u-76 AUC88144.1     13
 BM527_09315   Alteromonas sp. Mex14 APD88165.1     13
 DS731_17240   Alteromonas sp. RKMC-009 AYA66645.1     13
 BM528_10255   Alteromonas sp. RW2A1 APE06100.1     13
 AOR13_1415   Alteromonas stellipolaris LMG 21856 ALM90456.1     13
 AVL57_11570   Alteromonas stellipolaris LMG 21861 AMJ76405.1     13
 A6K25_14460   Alteromonas stellipolaris PQQ-42 ANB23641.1     13
 A6F57_00315   Alteromonas stellipolaris PQQ-44 ANB27329.1     13
 SAMN04489737_1252   Arcanobacterium phocae DSM 10002 SDU80600.1     13
 AA314_09410   Archangium gephyra DSM 2261 AKJ07784.1     13
 CFX0092_a2497   Ardenticatena Cfx-K CUS04375.1
CUS04389.2
    13
 ADJ73_08225   Arsenicicoccus sp. oral taxon 190 F0371 AKT51310.1     13
 Arth_3767   Arthrobacter sp. FB24 ABK05142.1 A0K1H2   13
 EP01_16110   Bdellovibrio bacteriovorus 109J AHZ86446.1     13
 Bd1228 (AmyX)   Bdellovibrio bacteriovorus HD100 CAE79132.1 Q6MNL9   13
 ACL96_05495   Bdellovibrio bacteriovorus HD100-merdel AKN82422.1     13
 B9G79_12600   Bdellovibrio bacteriovorus SSB218315 ASD64345.1     13
 Bdt_1217 (AmyX)   Bdellovibrio bacteriovorus str. Tiberius AFY00916.1     13
 DOE51_03655   Bdellovibrio sp. NC01 QDK36759.1     13
 DOM22_16590   Bdellovibrio sp. ZAP7 QDK47558.1     13
 Bfae_06650   Brachybacterium faecium DSM 4810 ACU84529.1 C7MIA3   13
 CFK39_11410   Brachybacterium sp. VR2415 ASK67178.1     13
 CLDAP_19880   Caldilinea aerophila DSM 14535 = NBRC 104270 BAM00028.1     13
 CYPRO_1645   Candidatus Cyclonatronum proteinivorum Omega AXJ00896.1     13
 Acid345_2329   Candidatus Koribacter versatilis Ellin345 ABF41330.1 Q1IP70   13
 C2869_02895   Catenovulum sp. CCB-QB4 AWB65445.1     13
 C2869_11010   Catenovulum sp. CCB-QB4 AWB66932.1     13
 Celf_1126   Cellulomonas fimi ATCC 484 AEE45261.1     13
 NCTC7547_01143 (Amy_1)   Cellulomonas fimi NCTC7547 VEH28739.1     13
 Cfla_2521   Cellulomonas flavigena DSM 20109 ADG75409.1 D5UI64   13
 Celgi_0936   Cellulomonas gilvus ATCC 13127 AEI11455.1     13
 E5225_04970 (PulA)   Cellulomonas sp. Z28 QCB93004.1     13
 FOG94_07955 (PulA)   Cellulosimicrobium cellulans NEB113 QDP75094.1     13
 CBR64_14185   Cellulosimicrobium cellulans PSBB019 ARU52434.1     13
 B8281_17105   Cellulosimicrobium sp. TH-20 ARK06189.1     13
 FY115_15225   Cellvibrio japonicus ADPT1-KOJIBIOSE QEI20595.1     13
 FY116_15230   Cellvibrio japonicus ADPT2-NIGEROSE QEI17017.1     13
 FY117_15225   Cellvibrio japonicus ADPT3-ISOMALTOSE QEI13443.1     13
 CJA_3161 (Pul13B)   Cellvibrio japonicus Ueda107 ACE82691.1 B3PDV8   13
 CBR65_18425   Cellvibrio sp. PSBB006 ARU30160.1     13
 B0D95_18180   Cellvibrio sp. PSBB023 AQT61809.1     13
 Z042_25840   Chania multitudinisentens RB-25 AJW28918.1     13
 FNU76_17650 (PulA)   Chitinimonas sp. R3-44 QDQ28023.1     13
 Cagg_2712   Chloroflexus aggregans DSM 9485 ACL25580.1 B8G574   13
 Cagg_2488   Chloroflexus aggregans DSM 9485 ACL25360.1 B8G3V8   13
 pullulanase (PulA; Caur_1313)   Chloroflexus aurantiacus J-10-fl AAN85642.1
ABY34541.1
A9W9Q5
Q8GCD1
  13
 Caur_0879   Chloroflexus aurantiacus J-10-fl ABY34112.1 A9WH17   13
 Chy400_1434   Chloroflexus aurantiacus Y-400-fl ACM52852.1 B9LC58   13
 Chy400_0954   Chloroflexus aurantiacus Y-400-fl ACM52377.1 B9LL96   13
 CMC5_036440   Chondromyces crocatus Cm c5 AKT39497.1     13
 B5D82_03190   Colwellia beringensis NB097-1 ASP49858.1     13
 CPS_1694   Colwellia psychrerythraea 34H AAZ25986.1 Q484T3   13
 CPS_0996   Colwellia psychrerythraea 34H AAZ27658.1 Q487M0   13
 EKO29_07955 (PulA)   Colwellia sp. Arc7-635 AZQ83953.1     13
 DBO93_11570   Colwellia sp. Arc7-D AWB59532.1     13
 CMT41_03770   Colwellia sp. MT41 ALO33942.1     13
 CMT41_03755   Colwellia sp. MT41 ALO36537.1     13
 A3Q34_05260   Colwellia sp. PAMC 20917 AOW76318.1     13
 A3Q34_05255   Colwellia sp. PAMC 20917 AOW76317.1     13
 EJ065_0325 (PulA)   Corallococcus coralloides B035 QAT81934.1     13
 COCOR_00316 (PulA)   Corallococcus coralloides DSM 2259 AFE10035.1     13
 A6J36_10410   Corynebacterium diphtheriae FDAARGOS_197 ARB88671.1     13
 CDHC03_0284   Corynebacterium diphtheriae HC03 AEX78015.1     13
 CDHC04_0268   Corynebacterium diphtheriae HC04 AEX80261.1     13
 DIP0357   Corynebacterium diphtheriae NCTC 13129 CAE48862.1
NP_938740.1
    13
 NCTC7838_00151 (PulA)   Corynebacterium diphtheriae NCTC7838 VEJ62934.1     13
 CDVA01_0251   Corynebacterium diphtheriae VA01 AEX82520.1     13
 BFS79_02035 (fragment)   Cutibacterium avidum DPC 6544 AOG27518.1     13
 BFS79_02030 (fragment)   Cutibacterium avidum DPC 6544 AOG27517.1     13
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