Carbohydrate-Binding Module Family 50

Activities in FamilyModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesCAZypedia;
Statistics GenBank accession (122875); Uniprot accession (16); PDB accession (42); 3D entries (29); cryst (0)
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Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D
 lysm domain-containing protein   Staphylococcus phage vB_SauM-T-SE-G2 WVW76905.1    
 lysm domain-containing protein   Staphylococcus phage vB_SauM-V1SA09 WOZ17278.1    
 lysm domain-containing protein   Staphylococcus phage vB_SauM-V1SA12 WPF67555.1    
 lysm domain-containing protein   Staphylococcus phage vB_SauM-V1SA15 WOZ17547.1    
 ORF   Staphylococcus phage vB_SauM-V1SA19 UVD42439.1    
 ORF   Staphylococcus phage vB_SauM-V1SA20 UVT34793.1    
 ORF   Staphylococcus phage vB_SauM-V1SA22 UVD42675.1    
 C5023_000060   Staphylococcus phage vB_SauM_0414_108 AVX47414.1    
 YN120080_164   Staphylococcus phage vB_SauM_JDYN WFG33881.1    
 LM12_0176   Staphylococcus phage vB_SauM_LM12 AUV57097.1    
 VL10_ORF46   Staphylococcus phage vB_SauM_VL10 WAX23237.1    
 VL14_ORF02   Staphylococcus phage vB_SauM_VL14 WBF03947.1    
 vBSau191_00055   Staphylococcus phage vB_Sau_191 WPK40988.1    
 vBSauCG_201   Staphylococcus phage vB_Sau_CG ARM69116.1    
 vBSauClo6_188   Staphylococcus phage vB_Sau_Clo6 ARM69329.1    
 ORF   Staphylococcus phage vB_Sau_P68 UJQ43394.1    
 vBSauS24_186   Staphylococcus phage vB_Sau_S24 ARM69540.1    
 VBSavMJYL01_02   Staphylococcus phage VB_SavM_JYL01 AXU40004.1    
 ORF   Staphylococcus phage vB_ScaM-V1SC01 UYE90340.1    
 ORF   Staphylococcus phage vB_ScaM-V1SC04 UXR08170.1    
 ORF   Staphylococcus phage vB_ScoM-PSC1 QZQ74967.1    
 ORF   Staphylococcus phage vB_SsapH-Golestan-105-M BDA82371.1    
 vB_SscM-1_060   Staphylococcus phage vB_SscM-1 ANT44723.1    
 vB_SscM-1_060   Staphylococcus phage vB_SscM-1 ANT44723.1    
 vB_SscM-2_058   Staphylococcus phage vB_SscM-2 ANT44925.1    
 vB_SscM-2_058   Staphylococcus phage vB_SscM-2 ANT44925.1    
 peptidoglycan-binding domain-containing protein   Staphylococcus phage ZCSS1 QQV88451.1    
 peptidoglycan-binding domain-containing protein   Staphylococcus phage ZCSS1 QQV88451.1    
 Sa83_053   Staphylococcus virus Sa83 QAU05604.1    
 Sa87_056   Staphylococcus virus Sa87 QAU05829.1    
 ORF   Staphylococcus virus vB_SurM-PSU2 WBF81523.1    
 peptidoglycan-binding domain-containing protein   Staphylococcus virus vB_SurM-PSU5 WBF81736.1    
 peptidoglycan-binding domain-containing protein   Staphylococcus virus vB_SurM-PSU6 WBF81930.1    
 CHPC1109_0022   Streptococcus phage CHPC1109 AZF92675.1    
 CHPC1109_0022   Streptococcus phage CHPC1109 AZF92675.1    
 Javan100_0035   Streptococcus phage Javan100 QBX22842.1    
 Javan100_0035   Streptococcus phage Javan100 QBX22842.1    
 Javan101_0005   Streptococcus phage Javan101 QBX13696.1    
 Javan104_0005   Streptococcus phage Javan104 QBX22914.1    
 Javan107_0005   Streptococcus phage Javan107 QBX13800.1    
 Javan113_0005   Streptococcus phage Javan113 QBX13893.1    
 Javan122_0005   Streptococcus phage Javan122 QBX23241.1    
 Javan123_0003   Streptococcus phage Javan123 QBX14112.1    
 Javan124_0037   Streptococcus phage Javan124 QBX23317.1    
 Javan181_0037   Streptococcus phage Javan181 QBX15329.1    
 Javan20_0001   Streptococcus phage Javan20 QBX24644.1    
 Javan213_0005   Streptococcus phage Javan213 QBX15753.1    
 Javan213_0005   Streptococcus phage Javan213 QBX15753.1    
 Javan220_0055   Streptococcus phage Javan220 QBX24959.1    
 Javan220_0055   Streptococcus phage Javan220 QBX24959.1    
 Javan221_0002   Streptococcus phage Javan221 QBX15860.1    
 Javan221_0002   Streptococcus phage Javan221 QBX15860.1    
 Javan224_0055   Streptococcus phage Javan224 QBX25015.1    
 Javan224_0055   Streptococcus phage Javan224 QBX25015.1    
 Javan226_0049   Streptococcus phage Javan226 QBX25068.1    
 Javan226_0049   Streptococcus phage Javan226 QBX25068.1    
 Javan227_0053   Streptococcus phage Javan227 QBX15963.1    
 Javan227_0053   Streptococcus phage Javan227 QBX15963.1    
 Javan231_0057   Streptococcus phage Javan231 QBX16078.1    
 Javan231_0057   Streptococcus phage Javan231 QBX16078.1    
 Javan233_0057   Streptococcus phage Javan233 QBX16137.1    
 Javan233_0057   Streptococcus phage Javan233 QBX16137.1    
 Javan25_0003   Streptococcus phage Javan25 QBX16421.1    
 Javan255_0005   Streptococcus phage Javan255 QBX16520.1    
 Javan29_0037 (fragment)   Streptococcus phage Javan29 QBX16876.1    
 Javan3_0007   Streptococcus phage Javan3 QBX16950.1    
 Javan308_0052   Streptococcus phage Javan308 QBX26221.1    
 Javan32_0036   Streptococcus phage Javan32 QBX26432.1    
 Javan369_0003   Streptococcus phage Javan369 QBX17592.1    
 Javan38_0003   Streptococcus phage Javan38 QBX27252.1    
 Javan40_0036   Streptococcus phage Javan40 QBX27598.1    
 Javan405_0035   Streptococcus phage Javan405 QBX18230.1    
 Javan424_0040 (fragment)   Streptococcus phage Javan424 QBX27958.1    
 Javan426_0004 (fragment)   Streptococcus phage Javan426 QBX27964.1    
 Javan49_0001   Streptococcus phage Javan49 QBX19558.1    
 Javan51_0035   Streptococcus phage Javan51 QBX20176.1    
 Javan55_0001   Streptococcus phage Javan55 QBX20990.1    
 Javan558_0006   Streptococcus phage Javan558 QBX30585.1    
 Javan57_0036   Streptococcus phage Javan57 QBX21387.1    
 Javan575_0005   Streptococcus phage Javan575 QBX21448.1    
 Javan59_0007   Streptococcus phage Javan59 QBX21736.1    
 Javan59_0007   Streptococcus phage Javan59 QBX21736.1    
 Javan599_0039   Streptococcus phage Javan599 QBX21892.1    
 Javan618_0005   Streptococcus phage Javan618 QBX31155.1    
 Javan639_0005   Streptococcus phage Javan639 QBX22175.1    
 Javan64_0007   Streptococcus phage Javan64 QBX31469.1    
 Javan64_0007   Streptococcus phage Javan64 QBX31469.1    
 Javan65_0036   Streptococcus phage Javan65 QBX22294.1    
 Javan68_0001   Streptococcus phage Javan68 QBX31691.1    
 Javan68_0001   Streptococcus phage Javan68 QBX31691.1    
 Javan69_0039   Streptococcus phage Javan69 QBX22335.1    
 Javan74_0001   Streptococcus phage Javan74 QBX31737.1    
 Javan74_0001   Streptococcus phage Javan74 QBX31737.1    
 Javan8_0036   Streptococcus phage Javan8 QBX31877.1    
 Javan92_0039   Streptococcus phage Javan92 QBX32087.1    
 Javan93_0039   Streptococcus phage Javan93 QBX22704.1    
 Javan95_0038   Streptococcus phage Javan95 QBX22746.1    
 MissE2_0020   Streptococcus phage MissE2 UJD18105.1    
 peptidoglycan-binding domain-containing protein   Streptococcus phage phi-SC181 QEM40853.1    
 cell wall hydrolase   Streptococcus phage phi-SgaBSJ27_rum QGJ85274.1    
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