Polysaccharide Lyase Family 24

Activities in Familyulvan lyase (EC 4.2.2.-).
NoteFamily created after Kopel et al. (2016) J. Biol. Chem., 291, 5871-5878 [PMID=26763234]. Ulvan lyases cleave the bond between 3-sulfated rhamnose (Rha3S) linked to either D-glucuronic acid (GlcA) or L-iduronic acid (IduA) in the marine polysaccharide ulvan. Members of this family are known to specifically cleave the b(1,4) glycosidic bond between GlcUA and R3S residues by b-elimination.
Statistics GenBank accession (31); Uniprot accession (0);
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ulvan lyase (UllA)   Alteromonas sp. KUL17 BAY00694.1    
 ulvan lyase (UllA)   Alteromonas sp. KUL42 BAY00695.1    
 ulvan lyase (LOR_107) 4.2.2.- Alteromonas sp. LOR AMA19991.1    
 ulvan lyase (LOR_61) 4.2.2.- Alteromonas sp. LOR WP_032096165.1    
 ORF   Aquimarina latercula WP_027394258.1    
 ORF   Arenitalea lutea WP_019386968.1    
 ORF   Catenovulum agarivorans WP_016956567.1    
 ORF   Catenovulum agarivorans WP_026016851.1    
 ORF   Catenovulum agarivorans WP_016956545.1    
 ORF   Catenovulum agarivorans WP_016957731.1    
 ORF   Catenovulum agarivorans WP_016956465.1    
 DS2_15349   Catenovulum agarivorans DS-2 EWH08847.1    
 DS2_13869   Catenovulum agarivorans DS-2 EWH09165.1    
 DS2_13884   Catenovulum agarivorans DS-2 EWH09168.1    
 DS2_07833   Catenovulum agarivorans DS-2 EWH10527.1    
 ORF   Catenovulum maritimum WP_053084479.1
KMT67098.1
   
 ORF   Catenovulum maritimum WP_048687978.1    
 XM47_11230   Catenovulum maritimum Q1 KMT65093.1
WP_053084548.1
   
 ORF (fragment)   Echinicola pacifica WP_018473426.1    
 ORF   Glaciecola sp. HTCC2999 WP_010178114.1    
 ulvan lyase (UllA)   Glaciecola sp. KUL10 BAY00693.1    
 JCM19294_1652   Nonlabens sediminis JCM 19294 GAK98030.1    
 ORF   Paraglaciecola agarilytica WP_008301824.1    
 ORF   Paraglaciecola chathamensis WP_007992385.1    
 ORF   Pseudoalteromonas haloplanktis WP_016710351.1    
 ulvan lyase (PLSV_3875) 4.2.2.- Pseudoalteromonas sp. PLSV AMA19992.1    
 ulvan lyase (PLSV_3925) 4.2.2.- Pseudoalteromonas sp. PLSV WP_033186955.1    
 ORF   Saccharophagus degradans WP_011469899.1    
 Sde_3428   Saccharophagus degradans 2-40 ABD82683.1    
Top


Last update: 2017-12-01 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille