Polysaccharide Lyase Family 17 / Subf 2

Activities in Sub FamilyAlginate lyase (EC 4.2.2.-);
Oligomannuronate lyase / exo-acting mannuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteThe alginate lyase function has been shown for several members of the family
External resourcesCAZypedia;
Statistics GenBank accession (1); Uniprot accession (14); PDB accession (7); 3D entries (3); cryst (0)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 J4N37_05485   Vibrio sp. SCSIO 43153 USD51021.1     2
 J4N44_05945   Vibrio sp. SCSIO 43155 USD55963.1     2
 J4N44_05940   Vibrio sp. SCSIO 43155 USD55962.1     2
 H9L11_20305   Vibrio sp. sp1 QRZ24204.1     2
 H9L11_20310   Vibrio sp. sp1 QRZ24205.1     2
 OalV17   Vibrio sp. SV01 QFQ59564.1     2
 FIV04_16035   Vibrio sp. THAF190c QFT11429.1     2
 FIV04_16040   Vibrio sp. THAF190c QFT11430.1     2
 oligoalginate lyase (OalA)   Vibrio sp. W13 AKH41065.1     2
 oligoalginate lyase (OalB)   Vibrio sp. W13 AKH41066.1     2
 QF117_03370   Vibrio sp. YMD68 WGV97918.1     2
 QF117_03365   Vibrio sp. YMD68 WGV97917.1     2
 oligoalginate lyase (polyMG-specific) (OalB;V12B01_24214) 4.2.2.-
4.2.2.-
Vibrio splendidus 12B01 EAP93062.1 A3UWQ5   2
 oligoalginate lyase (polyM-specific) (OalC;V12B01_24219) 4.2.2.3 Vibrio splendidus 12B01 EAP93063.1 A3UWQ6   2
 LTQ03_13410   Vibrio splendidus 1_C04a UOE79455.1     2
 LTQ03_13405   Vibrio splendidus 1_C04a UOE79454.1     2
 LTQ54_15610   Vibrio splendidus 2_C04b UOE84345.1     2
 LTQ54_15605   Vibrio splendidus 2_C04b UOE84344.1     2
 LTQ02_06825   Vibrio splendidus 4_C08b UOE90203.1     2
 IM698_10590   Vibrio splendidus ED144 UWZ96859.1     2
 IM698_10585   Vibrio splendidus ED144 UWZ96858.1     2
 KLJ63_10155   Vibrio splendidus ME9-GFP URM13416.1     2
 KLJ63_10160   Vibrio splendidus ME9-GFP URM13417.1     2
 LYZ37_18230   Vibrio tubiashii FP17 WCP69947.1     2
 LYZ37_18225   Vibrio tubiashii FP17 WCP69946.1     2
 AXE80_11225   Wenyingzhuangia fucanilytica CZ1127 ANW96815.1     2
 H0I32_06610   Winogradskyella sp. HaHa_3_26 QXP80291.1     2
 H7F37_13710   Winogradskyella sp. PAMC22761 QNK77155.1     2
 X12_001229   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1483 CAD7347511.1     2
 X12_001161   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 796 CAD2254701.1     2
 X12_001167   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1567 CAD7345037.1     2
 X12_003337   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 237 CAD2261782.1     2
 X12_001224   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 122 CAD2244788.1     2
 X12_003276   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 554 CAD7384483.1     2
 X12_001263   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1586 CAD7378591.1     2
 X12_001340   Xanthomonas arboricola isolate Xanthomonas sp. CPBF 1514 CAD7378803.1     2
 XA1311A_12010   Xanthomonas arboricola 1311a CAE6731754.1     2
 XA1314C_11980   Xanthomonas arboricola 1314c CAE6731760.1     2
 XAC301_33610   Xanthomonas arboricola pv. corylina 301 CAE6820696.1     2
 ICA18_05670   Xanthomonas arboricola pv. corylina A7 QUI81760.1     2
 CFBP1159_12620   Xanthomonas arboricola pv. corylina CFBP 1159 CAE6734258.1     2
 KP021_06015   Xanthomonas arboricola pv. corylina CFBP 1846 UQQ11778.1     2
 CFBP6600_33590   Xanthomonas arboricola pv. corylina CFBP 6600 CAE6821976.1     2
 KPG65_11460   Xanthomonas arboricola pv. corylina IVIA 3978 UQQ13221.1     2
 PUV44_18140 (fragment)   Xanthomonas arboricola pv. corylina NTM-B-28 WIX24546.1     2
 XSP_003210   Xanthomonas arboricola pv. juglandis CAD0337081.1     2
 KP727_06440   Xanthomonas arboricola pv. juglandis IVIA 1317 UQQ03551.1     2
 KP728_06005   Xanthomonas arboricola pv. juglandis IVIA 2499 UQP99227.1     2
 AKJ12_05375   Xanthomonas arboricola pv. juglandis Xaj 417 AKU49271.1     2
 F6Y24_06225   Xanthomonas arboricola pv. pruni 15-088 QEX76672.1     2
 KQR53_03905   Xanthomonas arboricola pv. pruni CITA 33 UQP94702.1     2
 KP026_16840   Xanthomonas arboricola pv. pruni IVIA 2626.1 UQQ05820.1     2
 K9U01_06000   Xanthomonas arboricola pv. pruni R1 UJO05347.1     2
 K9U02_14145   Xanthomonas arboricola pv. pruni T1 UJO07141.1     2
 L1B16_16595   Xanthomonas arboricola pv. pruni Xcp1 UJY93617.1     2
 LZZ50_08130   Xanthomonas arboricola YchA UOT00284.1     2
 XB05_00680   Xanthomonas campestris 17 AKC77424.1     2
 FPL04_05980   Xanthomonas citri pv. glycines 2098 QDS15233.1     2
 BEN78_01360   Xanthomonas citri pv. mangiferaeindicae XC01 ASR42254.1     2
 XSP_001174   Xanthomonas euroxanthea CPBF 424 CAD0318741.1     2
 XSP_001205   Xanthomonas euroxanthea CPBF 424 CAD0319105.1     2
 NMB96_12255   Xanthomonas hortorum jj2001 UTS71334.1     2
 OEG85_17630   Xanthomonas hortorum Oregano 108 WAH63281.1     2
 FZ025_04470   Xanthomonas hyacinthi CFBP 1156 QGY75955.1     2
 NYR97_15005   Xanthomonas hydrangeae 22-323 WOB48549.1     2
 OCJ37_14920   Xanthomonas sp. AM6 UYB51277.1     2
 NUG20_06560   Xanthomonas sp. CFBP 8443 UYC21949.1     2
 XSP_001205   Xanthomonas sp. CPBF 367 CAD1789183.1     2
 XSP_001174   Xanthomonas sp. CPBF 426 CAD1789110.1     2
 HEP73_03146   Xanthomonas sp. GW QNH22214.1     2
 DGN21_05800   Xanthomonas sp. MLO165 QWM98899.1     2
 HEP75_03041   Xanthomonas sp. SI QNH13589.1     2
 HEP74_02963   Xanthomonas sp. SS QNH17807.1     2
 polyM-specific alginate lyase (zobellia_2624; Alya3) 4.2.2.3 Zobellia galactanivorans DsijT CAZ96774.1 G0LCA3 7BJT[A,B]
7BM6[A,B]
2
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