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Polysaccharide Lyase Family 17 / Subf 2

Activities in Sub FamilyAlginate lyase (EC 4.2.2.-);
Oligomannuronate lyase / exo-acting mannuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteThe alginate lyase function has been shown for several members of the family
External resourcesCAZypedia;
Statistics GenBank accession (1); Uniprot accession (14); PDB accession (7); 3D entries (3); cryst (0)
Summary
Download PL17_2 (675) Taxonomic display Structure (3) Characterized (27)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Z042_21520   Chania multitudinisentens RB-25 AHG21900.1     2
 OQ292_34430   Chondrinema litorale WSW3-B12 UZR98949.1     2
 GFO_1151 (orf1138) (fragment)   Christiangramia forsetii KT0803 CAL66125.1     2
 orf1137 (fragment)   Christiangramia forsetii KT0803 CAL66124.1     2
 NBC122_01621   Chryseobacterium salivictor NBC 122 QBO58436.1     2
 QGN23_13830   Chryseobacterium sp. wdc7 WHF51488.1     2
 KDX00_17485   Cobetia litoralis MC13-5 UTV86846.1     2
 KDX00_17490   Cobetia litoralis MC13-5 UTV86847.1     2
 BFX80_07160   Cobetia marina JCM 21022 AOM01118.1     2
 alginate lyase (Alg2107; F8A90_10425) 4.2.2.- Cobetia sp. cqz5-12 QQK64493.1     2
 F8A90_10430 (Alg2108)   Cobetia sp. cqz5-12 QQK64494.1     2
 B5D82_13295   Cognaticolwellia beringensis NB097-1 ASP50014.1     2
 B5D82_13235   Cognaticolwellia beringensis NB097-1 ASP48646.1     2
 EKO29_05460   Colwellia sp. Arc7-635 AZQ83537.1     2
 DBO93_13910   Colwellia sp. Arc7-D AWB58543.1     2
 DBO93_13855   Colwellia sp. Arc7-D AWB59566.1     2
 FGD67_04935   Colwellia sp. M166 UUO22602.1     2
 A3Q33_13235   Colwellia sp. PAMC 21821 ARD46660.1     2
 R0135_10575   Congregibacter sp. IMCC43200 WOJ92231.1     2
 R0137_03645   Congregibacter sp. IMCC45268 WOJ97673.1     2
 CA2559_11508   Croceibacter atlanticus HTCC2559 EAP86660.1     2
 AB433_04690   Croceicoccus naphthovorans PQ-2 AKM09437.1     2
 I597_0903   Dokdonia donghaensis DSW-1 ANH59829.1     2
 Krodi_0315   Dokdonia sp. 4H-3-7-5 AEE18301.1     2
 DCS32_10570   Dokdonia sp. Dokd-P16 AWH74583.1     2
 MED134_10670   Dokdonia sp. MED134 EAQ38154.1     2
 DN752_00830 (fragment)   Echinicola strongylocentroti MEBiC08714 AWW28790.1     2
 GE278_11145   Enterobacteriaceae bacterium Kacie_13 QLK61286.1     2
 GXP68_10025   Ewingella americana B6-1 QMV51659.1     2
 LDL77_02525   Flagellimonas marinaquae F6 UBZ14599.1     2
 MJO53_09725   Flagellimonas marinaquae SCSIO W0262 USD23961.1     2
 LV716_03090   Flagellimonas sp. HMM57 UII76790.1     2
 KM029_18335   Flammeovirga kamogawensis YS10 QWG07238.1     2
 EI427_11105   Flammeovirga pectinis L12M1 AZQ62760.1     2
 exo-acting unsaturated oligoalginate lyase (Aly6; MY04_2549) 4.2.2.26
4.2.2.26		 Flammeovirga sp. MY04 ANQ49918.2
ANQ49918.1		     2
 KMW28_03450   Flammeovirga yaeyamensis NBRC:100898 QWG02643.1     2
 R9C00_16115   Flammeovirgaceae bacterium SG7u.111 WPO33228.1     2
 FSB75_07860   Flavisolibacter ginsenosidimutans Gsoil 636 QEC55811.1     2
 C1H87_08185   Flavivirga eckloniae ECD14 AUP78687.1     2
 FFWV33_03540   Flavobacterium faecale WV33 AWG20677.1     2
 E1750_01145   Flavobacterium nackdongense GS13 QBN17460.1     2
 FK004_07155   Flavobacterium sp. AJ004 AWG25023.1     2
 B0M43_0016730   Flavobacterium sp. KBS0721 QDW21685.1     2
 SLW70_03085   Flavobacterium sp. NG2 WPR72139.1     2
 alginate lyase 2B (Alg2B)   Flavobacterium sp. S20 AFV91542.1     2
 GIY83_08810   Flavobacterium sp. SLB02 SGTM QGK74151.1     2
 alginate lyase (AlyB;FlAlyB)   Flavobacterium sp. UMI-01 BAQ25533.1     2
 MH928_09200   Flavobacterium sp. WW92 WDO11507.1     2
 BN863_26850   Formosa agariphila KMM 3901 CDF80397.1     2
 FNB79_00985   Formosa sediminum PS13 QDO92613.1     2
 J421_1193   Gemmatirosa kalamazoonensis KBS708 AHG88730.1     2
 NHM04_04305   Gilvimarinus sp. DA14 UTF61027.1     2
 Glaag_3645   Glaciecola sp. 4H-3-7+YE-5 AEE24574.1     2
 IMCC3135_30035   Granulosicoccus antarcticus IMCC3135 ASJ76056.1     2
 EY643_05725   Halioglobus maricola IMCC14385 QFU77774.1     2
 oligoalginate lyase (Oaly2) 4.2.2.26
4.2.2.26		 Halomonas sp. QY114 AMR08482.1     2
 oligoalginate lyase (Oaly1) 4.2.2.26
4.2.2.26		 Halomonas sp. QY114 AMR08481.1     2
 C8233_00690   Halomonas sp. SF2003 AVV32393.1     2
 C8233_00695   Halomonas sp. SF2003 AVV32394.1     2
 oligoalginate lyase 2   Halomonas sp. Victoria JH ANB32496.1     2
 Oligoalginate lyase1   Halomonas sp. Victoria JH ANB32495.1     2
 Hbal_2771   Hirschia baltica ATCC 49814 ATCC 59814 ACT60444.1     2
 alginate lyase   Hydrogenophaga sp. UMI-18 BBH51062.1     2
 CFA77_11230   Hyphomonas sp. KY3 QSR22869.1     2
 Q73A0000_08505   Kaistella flava 7-3A QOW10403.1     2
 WP3S18E05_29960 (fragment)   Klebsiella sp. WP3-S18-ESBL-05 BBR21516.1     2
 WP4W18E05_17060 (fragment)   Klebsiella sp. WP4-W18-ESBL-05 BBR58338.1     2
 WP7S18E04_30290 (fragment)   Klebsiella sp. WP7-S18-ESBL-04 BBT02467.1     2
 WP8S18E06_29590 (fragment)   Klebsiella sp. WP8-S18-ESBL-06 BBT71660.1     2
 MY052_15225 (fragment)   Kluyvera ascorbata SK UPQ70105.1     2
 RIN60_14365 (fragment)   Kluyvera cryocrescens 1.8.5 WNN70266.1     2
 K7B04_14075 (fragment)   Kluyvera sp. CRP UAK18471.1     2
 GY169_15110 (fragment)   Kluyvera sp. PO2S7 QIR28051.1     2
 IMCC3317_38130   Kordia antarctica IMCC3317 QHI38420.1     2
 ALGA_3305   Labilibaculum antarcticum SPP2 BAX81605.1     2
 Lacal_1748   Lacinutrix sp. 5H-3-7-4 AEH01596.1     2
 FG167_06570   Lacinutrix sp. WUR7 QRM88912.1     2
 BWR22_11825   Lacinutrix venerupis DOK2-8 APY01526.1     2
 J4558_02125 (fragment)   Leptolyngbya sp. 15MV QYU68961.1     2
 U3649_00575   Luteimonas sp. R10 WRL50934.1     2
 MKD41_09495   Lutibacter sp. A64 UMB52571.1     2
 MHL31_08750   Lutibacter sp. A80 UMB59167.1     2
 QZH61_02195   Lutimonas sp. YSD2104 WKK66441.1     2
 BTR34_05385   Maribacter hydrothermalis T28 APQ16785.1     2
 YQ22_05100   Maribacter sp. 1_2014MBL_MicDiv APA63741.1     2
 QSV08_19325   Maribacter sp. BPC-D8 WRI29358.1     2
 SAMN05192545_0154   Maribacter sp. MAR_2009_60 SDR79568.1     2
 EJ994_16720   Maribacter sp. MJ134 AZQ60369.1     2
 Mmar10_0256   Maricaulis maris MCS10 ABI64549.1     2
 CJ739_3056   Mariniflexile sp. TRM1-10 AXP82119.1     2
 G5B37_00450   Marinirhabdus gelatinilytica RR4-40 QIE58088.1     2
 A8C75_02220   Marinobacterium aestuarii ST58-10 ANG61398.1     2
 A8C75_02225   Marinobacterium aestuarii ST58-10 ANG61399.1     2
 KDW95_14115   Marinobacterium rhizophilum D13-1 UTW10431.1     2
 KDW95_14120   Marinobacterium rhizophilum D13-1 UTW10432.1     2
 ONZ50_18365 (fragment)   Marinomonas sp. GJ51-6 WOD07492.1     2
 ONZ50_18360 (fragment)   Marinomonas sp. GJ51-6 WOD07491.1     2
 ONZ50_18370 (fragment)   Marinomonas sp. GJ51-6 WOD09361.1     2
 MROS_1366   Melioribacter roseus P3M-2 AFN74603.1     2
 Mag101_00420   Microbulbifer agarilyticus GP101 AQQ69289.1     2
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