Activities in Sub Family | Alginate lyase (EC 4.2.2.-); Oligomannuronate lyase / exo-acting mannuronan lyase (EC 4.2.2.-); Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-); Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26); Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3); |
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Mechanism | b-elimination |
3D Structure Status | ( α / α ) 6 toroid + anti-parallel β-sheet |
Note | The alginate lyase function has been shown for several members of the family |
External resources | CAZypedia; |
Statistics | GenBank accession (1); Uniprot accession (14); PDB accession (7); 3D entries (3); cryst (0) |
Bacteria | ||||||||
Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
oligoalginate lyase (Oal17A2; LQZ07_11290) | 4.2.2.26 4.2.2.26 |
pubmed |
Agarivorans sp. B2Z047 | UQN45019.1 | 2 | |||
oligoalginate lyase (specificly acting on disaccharides) (Oal17A1; LQZ07_11285) | 4.2.2.26 4.2.2.26 |
pubmed |
Agarivorans sp. B2Z047 | UQN45018.1 | 2 | |||
oligomannuronate lyase / oligoalginate lyase (MASE_04140) | 4.2.2.- | Alteromonas macleodii ATCC 27126 | AFS36377.1 | 2 | ||||
oligomannuronate lyase / exo-mannuronate lyase (BACEGG_03249) | 4.2.2.- | Bacteroides eggerthii DSM 20697 | WP_004291737.1 EEC52271.1 |
A0A380Z832 | 2 | |||
M-specific alginate lyase (BoPL17; OU990_24725) | 4.2.2.3 | pubmed |
Bacteroides ovatus CP926 | WII03611.1 | 8BDD[A,B] | 2 | ||
alginate lyase (Alg2107; F8A90_10425) | 4.2.2.- | Cobetia sp. cqz5-12 | QQK64493.1 | 2 | ||||
exo-acting unsaturated oligoalginate lyase (Aly6; MY04_2549) | 4.2.2.26 4.2.2.26 |
pubmed |
Flammeovirga sp. MY04 | ANQ49918.2 ANQ49918.1 |
2 | |||
oligoalginate lyase (Oaly2) | 4.2.2.26 4.2.2.26 |
pubmed |
Halomonas sp. QY114 | AMR08482.1 | 2 | |||
oligoalginate lyase (Oaly1) | 4.2.2.26 4.2.2.26 |
pubmed |
Halomonas sp. QY114 | AMR08481.1 | 2 | |||
polyM-specific alginate lyase (AlgL17) | 4.2.2.3 | pubmed |
Microbulbifer sp. ALW1 | ATG71374.1 | A0A3Q8CBV3 | 2 | ||
alginate lyase (AlgSH17; GNX18_13365) | 4.2.2.3 | pubmed |
Microbulbifer sp. SH-1 | QIL90639.1 QIJ31368.1 |
A0A6G7MA70 | 2 | ||
oligomannuronate lyase / exo-mannuronate lyase (Nonul2377) | 4.2.2.- | Nonlabens ulvanivorans | WP_036584315.1 | A0A084JVC5 | 2 | |||
oligoalginate lyase (AlyM3; JFJ09_15375) | 4.2.2.26 4.2.2.26 |
Pseudoalteromonas arctica M9 | MBZ2193586.1 | 2 | ||||
oligomannuronate lyase / exo-mannuronate lyase (Patl_3651) | 4.2.2.- | Pseudoalteromonas atlantica T6c | ABG42153.1 | 2 | ||||
alginate lyase (Aly23) | 4.2.2.- | Pseudoalteromonas carrageenovora ASY5 | QWT68652.1 | 2 | ||||
alginate lyase (AlyII) | 4.2.2.3 | pubmed |
Pseudomonas sp. OS-ALG-9 | BAA19848.1 ACK10579.1 |
O05937 | 2 | ||
oligomannuronate lyase / exo-acting mannuronan lyase (Pedsa_1196) | 4.2.2.- | Pseudopedobacter saltans DSM 12145 | ADY51764.1 | 2 | ||||
exo-alginate lyase (AlyRM4) | 4.2.2.26 4.2.2.26 |
pubmed |
Rhodothermus marinus MAT378 | UVF39826.1 | 2 | |||
oligomannuronate lyase / oligoalginate lyase (Sde_3284) (Alg17C) | 4.2.2.- | Saccharophagus degradans 2-40 | ABD82539.1 ACK10580.1 |
Q21FJ0 | 4NEI[A,B] 4OJZ[A,B] 4OK2[A,B] 4OK4[A,B] |
2 | ||
oligoalginate lyase (OalS17) | 4.2.2.26 4.2.2.26 |
pubmed |
Shewanella sp. Kz7 | AHW45238.1 | A0A088CA41 | 2 | ||
oligoalginate lyase (AlgL) | 4.2.2.26 4.2.2.26 |
pubmed |
Sphingomonas sp. MJ-3 | AEM45874.1 AEL31264.1 |
G0ZNC1 G1EH67 |
2 | ||
oligomannuronate lyase / exo-acting mannuronan lyase (Smlt2602) | 4.2.2.- | Stenotrophomonas maltophilia K279a | CAQ46078.1 B2FSW8.1 |
2 | ||||
oligoalginate lyase (OAL) | 4.2.2.26 4.2.2.26 |
doi |
Stenotrophomonas maltophilia KJ-2 / KCTC32000 | AGM38186.2 | T1RPY0 | 2 | ||
oligoalginate lyase (Pl17A; AMOR_PL17A) | 4.2.2.26 4.2.2.26 |
pubmed |
uncultured bacterium | QMS47797.1 | A0A7L7K5T5 | 2 | ||
oligoalginate lyase (polyMG-specific) (OalB;V12B01_24214) | 4.2.2.- 4.2.2.- |
pubmed pubmed |
Vibrio splendidus 12B01 | EAP93062.1 | A3UWQ5 | 2 | ||
oligoalginate lyase (polyM-specific) (OalC;V12B01_24219) | 4.2.2.3 | pubmed |
Vibrio splendidus 12B01 | EAP93063.1 | A3UWQ6 | 2 | ||
polyM-specific alginate lyase (zobellia_2624; Alya3) | 4.2.2.3 | pubmed |
Zobellia galactanivorans DsijT | CAZ96774.1 | G0LCA3 | 7BJT[A,B] 7BM6[A,B] |
2 | |
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