Glycoside Hydrolase Family 43 / Subf 5

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (434); Uniprot accession (61); PDB accession (11); 3D entries (5); cryst (0)
All (414) Bacteria (403) Eukaryota (11) Structure (5) Characterized (10)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 BANAU_2802 (AbnA)   Bacillus velezensis YAU B9601-Y2 CCG50823.1     5
 AAV30_06035   Bacillus velezensis YJ11-1-4 AKF75741.1     5
 CLDAP_34990   Caldilinea aerophila DSM 14535 = NBRC 104270 BAM01539.1     5
 Acid_4441   Candidatus Solibacter usitatus Ellin6076 ABJ85402.1 Q01Y63   5
 Celf_0904   Cellulomonas fimi ATCC 484 AEE45041.1     5
 Cfla_0179   Cellulomonas flavigena DSM 20109 ADG73098.1 D5UGB5   5
 Celgi_2552   Cellulomonas gilvus ATCC 13127 AEI13051.1     5
 endo-α-1,5-L-arabinanase / exo-α-1,5-L-arabinanase 43A (ArbA;CJA_0805) (Arb43A) 3.2.1.99
3.2.1.-
Cellvibrio japonicus Ueda107 ACE84667.1
CAA71485.1
B3PKP8
P95470
1GYD[B]
1GYE[B]
1GYH[A,B,C,D,E,F]
5
 CJA_0816 (Gly43C)   Cellvibrio japonicus Ueda107 ACE85589.1 B3PKQ9   5
 CBR65_10680   Cellvibrio sp. PSBB006 ARU27851.1     5
 CBR65_12200   Cellvibrio sp. PSBB006 ARU28124.1     5
 CBR65_10695   Cellvibrio sp. PSBB006 ARU27854.1     5
 B0D95_20060   Cellvibrio sp. PSBB023 AQT62150.1     5
 B0D95_20040   Cellvibrio sp. PSBB023 AQT62146.1     5
 A9D14_05795   Croceicoccus marinus E4A9 ARU15784.1     5
 B7495_01955   Cryobacterium sp. LW097 ASD21018.1     5
 CYFUS_004441   Cystobacter fuscus DSM 52655 ATB39002.1     5
 Deide_1p00592 (fragment)   Deinococcus deserti VCD115 ACO47463.1 C1D224   5
 Deima_0246   Deinococcus maricopensis DSM 21211 ADV65909.1     5
 Deima_0249   Deinococcus maricopensis DSM 21211 ADV65912.1     5
 Deipe_0764   Deinococcus peraridilitoris DSM 19664 AFZ66341.1     5
 Deipe_0770   Deinococcus peraridilitoris DSM 19664 AFZ66347.1     5
 AAM4_0511   Desulfitobacterium hafniense CED90406.1     5
 FH5T_02110   Draconibacterium orientale FH5 AHW58777.1     5
 Dfer_4284   Dyadobacter fermentans DSM 18053 ACT95486.1 C6W131   5
 Echvi_0520   Echinicola vietnamensis DSM 17526 AGA76804.1     5
 FAES_4680   Fibrella aestuarina BUZ 2 CCH02679.1     5
 A6C57_01750   Fibrella sp. ES10-3-2-2 ARK09142.1     5
 Fisuc_1999 / FSU_2522   Fibrobacter succinogenes subsp. succinogenes S85 ACX75587.1
ADL26985.1
C9RIW6   5
 Fisuc_2622 / FSU_3191   Fibrobacter succinogenes subsp. succinogenes S85 ACX76206.1
ADL27020.1
C9RMH4   5
 Fisuc_2623 / FSU_3192   Fibrobacter succinogenes subsp. succinogenes S85 ACX76207.1
ADL25852.1
C9RMH5   5
 FLA_2636   Filimonas lacunae NBRC 104114 BAV06617.1     5
 FLA_4744   Filimonas lacunae NBRC 104114 BAV08697.1     5
 OP10G_3762   Fimbriimonas ginsengisoli Gsoil 348 AIE87130.1     5
 D770_14235   Flammeovirgaceae bacterium 311 AHM61101.1     5
 BIW12_00220   Flavobacterium communis PK15 AOZ97987.1     5
 SAMN04488543_3783   Friedmanniella luteola DSM 21741 SDT33226.1     5
 Fuma_02988 (Abn-tS) (fragment)   Fuerstia marisgermanicae NH11 APZ93371.1     5
 A0V43_06910   Geobacillus sp. JS12 AMQ20692.1     5
 GYMC52_1862   Geobacillus sp. Y412MC52 ADU94284.1 C3J350   5
 GYMC61_2732   Geobacillus sp. Y412MC61 ACX79314.1 C9RT69   5
 α-1,5-L-arabinanase (AbnB;HUS_CDS25) (intracellular) 3.2.1.99 Geobacillus stearothermophilus T-6 NCIMB 40222 ACE73676.1 B3EYM8 3CU9[A]
3D5Y[A]
3D5Z[A]
3D60[A]
3D61[A]
5
 endo-α-1,5-L-arabinanase (Abn-ts) 3.2.1.99 Geobacillus thermodenitrificans TS-3 BAB64339.1 Q93HT9 1WL7[A] 5
 GRFL_2262   Gramella flava JLT2011 APU68986.1     5
 orf684   Gramella forsetii KT0803 CAL65671.1 A0LZ76   5
 AciX8_2912   Granulicella mallensis MP5ACTX8 AEU37215.1     5
 AciX9_1830   Granulicella tundricola MP5ACTX9 ADW68877.1     5
 YC6258_00776   Gynuella sunshinyii YC6258 AJQ92826.1     5
 HELO_2799   Halomonas elongata DSM 2581 type strain: DSM 2581 CBV42683.1
CBV42683.2
E1V3K4   5
 AUC43_05550   Hymenobacter sedentarius DG5B ALW87245.1     5
 AUC43_05495   Hymenobacter sedentarius DG5B ALW84586.1     5
 AUC43_05550   Hymenobacter sedentarius DG5B ALW87245.1     5
 Hsw_2673   Hymenobacter swuensis DY53 AHJ98268.1     5
 Hsw_2679   Hymenobacter swuensis DY53 AHJ98274.1     5
 Hsw_2685   Hymenobacter swuensis DY53 AHJ98280.1     5
 I598_1450 (Abn-tS)   Isoptericola dokdonensis DS-3 ANC31006.1     5
 I598_1473 (AbnB)   Isoptericola dokdonensis DS-3 ANC31026.1     5
 Isova_0803   Isoptericola variabilis 225 AEG43589.1     5
 YQ44_25850   Janthinobacterium sp. 1_2014MBL_MicDiv APA71705.1     5
 YQ44_21405   Janthinobacterium sp. 1_2014MBL_MicDiv APA71599.1     5
 BN2497_4411   Janthinobacterium sp. CG23_2 CUI20430.1     5
 BN2497_2851   Janthinobacterium sp. CG23_2 CUI19650.1     5
 BZG29_02265   Janthinobacterium sp. LM6 AQR67310.1     5
 CNX70_02300   Janthinobacterium svalbardensis PAMC 27463 ATD59148.1     5
 Jden_0516   Jonesia denitrificans DSM 20603 ACV08180.1 C7R0C1   5
 Krad_0078   Kineococcus radiotolerans SRS30216 = ATCC BAA-149 ABS01569.1 A6W430   5
 AT746_04295   Lacimicrobium alkaliphilum YelD216 ALS97565.1     5
 AT746_05130   Lacimicrobium alkaliphilum YelD216 ALT00333.1     5
 AT746_16765   Lacimicrobium alkaliphilum YelD216 ALS99754.1     5
 BBK82_42275   Lentzea guizhouensis DHS C013 ANZ41600.1     5
 BBK82_30425   Lentzea guizhouensis DHS C013 ANZ43148.1     5
 AM586_16725   Massilia sp. WG5 ALK97614.1     5
 AB663_000426   Microbacterium sp. XT11 ALX65742.1     5
 Micau_2522   Micromonospora aurantiaca ATCC 27029 ADL46061.1 D9T721   5
 GA0070618_4632   Micromonospora echinospora DSM 43816 SCF26571.1     5
 GA0070623_1483   Micromonospora rifamycinica DSM 44983 SCG47561.1     5
 ML5_5841   Micromonospora sp. L5 ADU11298.1 D3CAZ1   5
 Orf20   Micromonospora sp. NRRL B-16802 AGZ94271.1     5
 A7982_05883   Minicystis rosea DSM 24000 APR80536.1     5
 A7982_05882   Minicystis rosea DSM 24000 APR80535.1     5
 SAMN05216490_1620   Mucilaginibacter mallensis MP1X4 SDS69077.1     5
 Niako_0728   Niastella koreensis GR20-10 AEV97111.1     5
 CGQ36_08680   Nocardiopsis dassonvillei HZNU_N_1 ASU57614.1     5
 A9R04_08590   Nocardiopsis dassonvillei NOCA502F APC38329.1     5
 Ndas_0989   Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 ADH66433.1 D7B0M6   5
 BN4615_P7624   Nonomuraea gerenzanensis ATCC 39727 SBO98108.1     5
 BKM31_06010   Nonomuraea sp. ATCC 55076 AQZ61101.1     5
 BES08_06865   Novosphingobium resinovorum SA1 AOR76492.1     5
 Oter_1390   Opitutus terrae PB90-1 ACB74675.1 B1ZRZ9   5
 AR543_21305   Paenibacillus bovis BD3526 ANF98279.1     5
 A3958_23900   Paenibacillus glucanolyticus 5162 ANA82827.1     5
 B4V02_21095   Paenibacillus kribbensis AM49 ASR49013.1     5
 PM3016_4050   Paenibacillus mucilaginosus 3016 AFC30834.1     5
 PM3016_2745   Paenibacillus mucilaginosus 3016 AFC29621.1     5
 B2K_21040   Paenibacillus mucilaginosus K02 AFH63157.1
AFK65339.1
    5
 B2K_13910   Paenibacillus mucilaginosus K02 AFH61798.1
AFK65335.1
    5
 KNP414_02486 (AbnA)   Paenibacillus mucilaginosus KNP414 AEI41047.1     5
 KNP414_04639   Paenibacillus mucilaginosus KNP414 AEI43169.1     5
 PODO_11075   Paenibacillus odorifer DSM 15391 AIQ73747.1     5
 VK72_04260   Paenibacillus polymyxa ATCC 15970 APQ58024.1     5
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