Glycoside Hydrolase Family 43 / Subf 5

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (517); Uniprot accession (61); PDB accession (12); 3D entries (6); cryst (0)
All (498) Bacteria (483) Eukaryota (15) Structure (6) Characterized (11)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 C3Z10_14955   Bacillus velezensis CGMCC 11640 AVI29609.1     5
 CVD07_13520   Bacillus velezensis CN026 ATY29264.1     5
 A2I97_12905   Bacillus velezensis D2-2 AOU01915.1     5
 DA376_13420   Bacillus velezensis DR-08 AVV94876.1     5
 BVDSYZ_14970   Bacillus velezensis DSYZ AWX73261.1     5
 RBAM_025870   Bacillus velezensis FZB42 ABS74945.1 A7Z7G9   5
 ABH13_2704   Bacillus velezensis G341 AKL77282.1     5
 B6257_03735   Bacillus velezensis GFP-2 AUJ59778.1     5
 BVH55_14415   Bacillus velezensis GH1-13 AQS45042.1     5
 BAGQ_2826   Bacillus velezensis GQJK49 ARZ59056.1     5
 B9C53_16270   Bacillus velezensis GYL4 AWD14915.1     5
 CJP14_11950   Bacillus velezensis J01 ASZ04537.1     5
 AAV29_14280   Bacillus velezensis JJ-D34 AKF31658.1     5
 NG74_02727 (AbnA)   Bacillus velezensis JS25R AIU82777.1     5
 BAJT_13220   Bacillus velezensis JTYP2 ARB34206.1     5
 CRH11_18945   Bacillus velezensis L-1 ATO11960.1     5
 CQJ38_13475   Bacillus velezensis LABIM40 ATL40479.1     5
 DDE72_03420   Bacillus velezensis LM23DO2 AWE15281.1     5
 A8142_12785   Bacillus velezensis LS69 ANU31014.1     5
 CXP43_14650   Bacillus velezensis Lzh-a42 AUG36911.1     5
 BBJ33_13575   Bacillus velezensis M75 AOO62526.1     5
 BAPNAU_0966 (AbnA)   Bacillus velezensis NAU-B3 CDH94747.1     5
 AW02_027390   Bacillus velezensis NJN-6 AKD30887.1     5
 BVQ_14860   Bacillus velezensis QST713 AWD88671.1     5
 BVS141_26800 (Abna1)   Bacillus velezensis S141 BBA77200.1     5
 A5891_12920   Bacillus velezensis S3-1 ANS39255.1     5
 A6R78_11630   Bacillus velezensis SB1216 ANB84624.1     5
 CHN56_03484 (AbnA)   Bacillus velezensis SCDB 291 ASS63918.1     5
 CLI97_00888 (AbnA)   Bacillus velezensis SCGB 1 ATC50222.1     5
 CLI98_00643 (AbnA)   Bacillus velezensis SCGB 574 ATD73975.1     5
 C1N92_04915   Bacillus velezensis SGAir0473 AWQ14271.1     5
 V529_28740 (AbnA)   Bacillus velezensis SQR9 AHZ16900.1     5
 S100072_02794   Bacillus velezensis SRCM100072 ASB54125.1     5
 S101413_03061   Bacillus velezensis SRCM101413 ASB66503.1     5
 BLL65_05765   Bacillus velezensis sx01604 AQZ72494.1     5
 CEG11_13400   Bacillus velezensis T20E-257 ASF56045.1     5
 CG798_19220   Bacillus velezensis TB1501 ASP27173.1     5
 AJ82_14605   Bacillus velezensis TrigoCor1448 AHK50104.1     5
 RBAU_2724 (AbnA)   Bacillus velezensis UCMB5033 CDG30692.1     5
 BAM5036_2527 (AbnA)   Bacillus velezensis UCMB5036 CCP22557.1     5
 BASU_2530 (AbnA)   Bacillus velezensis UCMB5113 CDG26820.1     5
 C6P48_05870   Bacillus velezensis VCC-2003 AVM07784.1     5
 BANAU_2802 (AbnA)   Bacillus velezensis YAU B9601-Y2 CCG50823.1     5
 AAV30_06035   Bacillus velezensis YJ11-1-4 AKF75741.1     5
 CLDAP_34990   Caldilinea aerophila DSM 14535 = NBRC 104270 BAM01539.1     5
 Acid_4441   Candidatus Solibacter usitatus Ellin6076 ABJ85402.1 Q01Y63   5
 C2869_21915   Catenovulum sp. CCB-QB4 AWB69162.1     5
 C2869_21795   Catenovulum sp. CCB-QB4 AWB69139.1     5
 Celf_0904   Cellulomonas fimi ATCC 484 AEE45041.1     5
 Cfla_0179   Cellulomonas flavigena DSM 20109 ADG73098.1 D5UGB5   5
 Celgi_2552   Cellulomonas gilvus ATCC 13127 AEI13051.1     5
 endo-α-1,5-L-arabinanase / exo-α-1,5-L-arabinanase 43A (ArbA;CJA_0805) (Arb43A) 3.2.1.99
3.2.1.-
Cellvibrio japonicus Ueda107 ACE84667.1
CAA71485.1
B3PKP8
P95470
1GYD[B]
1GYE[B]
1GYH[A,B,C,D,E,F]
5
 CJA_0816 (Gly43C)   Cellvibrio japonicus Ueda107 ACE85589.1 B3PKQ9   5
 CBR65_10680   Cellvibrio sp. PSBB006 ARU27851.1     5
 CBR65_12200   Cellvibrio sp. PSBB006 ARU28124.1     5
 CBR65_10695   Cellvibrio sp. PSBB006 ARU27854.1     5
 B0D95_20060   Cellvibrio sp. PSBB023 AQT62150.1     5
 B0D95_20040   Cellvibrio sp. PSBB023 AQT62146.1     5
 A9D14_05795   Croceicoccus marinus E4A9 ARU15784.1     5
 B7495_01955   Cryobacterium sp. LW097 ASD21018.1     5
 CYFUS_004441   Cystobacter fuscus DSM 52655 ATB39002.1     5
 Deide_1p00592 (fragment)   Deinococcus deserti VCD115 ACO47463.1 C1D224   5
 Deima_0246   Deinococcus maricopensis DSM 21211 ADV65909.1     5
 Deima_0249   Deinococcus maricopensis DSM 21211 ADV65912.1     5
 Deipe_0764   Deinococcus peraridilitoris DSM 19664 AFZ66341.1     5
 Deipe_0770   Deinococcus peraridilitoris DSM 19664 AFZ66347.1     5
 AAM4_0511   Desulfitobacterium hafniense CED90406.1     5
 C4375_08995   Devosia sp. I507 AVF03849.1     5
 FH5T_02110   Draconibacterium orientale FH5 AHW58777.1     5
 Dfer_4284   Dyadobacter fermentans DSM 18053 ACT95486.1 C6W131   5
 DN752_08955   Echinicola strongylocentroti MEBiC08714 AWW30243.1     5
 Echvi_0520   Echinicola vietnamensis DSM 17526 AGA76804.1     5
 FAES_4680   Fibrella aestuarina BUZ 2 CCH02679.1     5
 A6C57_01750   Fibrella sp. ES10-3-2-2 ARK09142.1     5
 Fisuc_1999 / FSU_2522   Fibrobacter succinogenes subsp. succinogenes S85 ACX75587.1
ADL26985.1
C9RIW6   5
 Fisuc_2622 / FSU_3191   Fibrobacter succinogenes subsp. succinogenes S85 ACX76206.1
ADL27020.1
C9RMH4   5
 Fisuc_2623 / FSU_3192   Fibrobacter succinogenes subsp. succinogenes S85 ACX76207.1
ADL25852.1
C9RMH5   5
 FLA_2636   Filimonas lacunae NBRC 104114 BAV06617.1     5
 FLA_4744   Filimonas lacunae NBRC 104114 BAV08697.1     5
 OP10G_3762   Fimbriimonas ginsengisoli Gsoil 348 AIE87130.1     5
 D770_14235   Flammeovirgaceae bacterium 311 AHM61101.1     5
 BIW12_00220   Flavobacterium commune PK15 AOZ97987.1     5
 SAMN04488543_3783   Friedmanniella luteola DSM 21741 SDT33226.1     5
 Fuma_02988 (Abn-tS) (fragment)   Fuerstia marisgermanicae NH11 APZ93371.1     5
 A0V43_06910   Geobacillus sp. JS12 AMQ20692.1     5
 GYMC52_1862   Geobacillus sp. Y412MC52 ADU94284.1 C3J350   5
 GYMC61_2732   Geobacillus sp. Y412MC61 ACX79314.1 C9RT69   5
 α-1,5-L-arabinanase (AbnB;HUS_CDS25) (intracellular) 3.2.1.99 Geobacillus stearothermophilus T-6 NCIMB 40222 ACE73676.1 B3EYM8 3CU9[A]
3D5Y[A]
3D5Z[A]
3D60[A]
3D61[A]
5
 AbnB   Geobacillus thermodenitrificans T81 ATG84581.1     5
 endo-α-1,5-L-arabinanase (Abn-ts) 3.2.1.99 Geobacillus thermodenitrificans TS-3 BAB64339.1 Q93HT9 1WL7[A] 5
 GRFL_2262   Gramella flava JLT2011 APU68986.1     5
 orf684   Gramella forsetii KT0803 CAL65671.1 A0LZ76   5
 C7S20_13680   Gramella sp. SH35 AVR46225.1     5
 AciX8_2912   Granulicella mallensis MP5ACTX8 AEU37215.1     5
 AciX9_1830   Granulicella tundricola MP5ACTX9 ADW68877.1     5
 YC6258_00776   Gynuella sunshinyii YC6258 AJQ92826.1     5
 HELO_2799   Halomonas elongata DSM 2581 type strain: DSM 2581 CBV42683.1
CBV42683.2
E1V3K4   5
 AUC43_05550   Hymenobacter sedentarius DG5B ALW87245.1     5
 AUC43_05495   Hymenobacter sedentarius DG5B ALW84586.1     5
 AUC43_05550   Hymenobacter sedentarius DG5B ALW87245.1     5
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