Glycoside Hydrolase Family 43 / Subf 5

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (434); Uniprot accession (61); PDB accession (11); 3D entries (5); cryst (0)
All (414) Bacteria (403) Eukaryota (11) Structure (5) Characterized (10)
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3DSubf
 endo-α-1,5-L-arabinanase (AbnA;BLABNase;BLi01295;BL02653) 3.2.1.99 Bacillus licheniformis DSM 13 = ATCC 14580 AAU40201.1
AAU22854.1
AAU22854.2
Q65L63   5
 endo-α-1,5-L-arabinanase 3.2.1.99 Bacillus subtilis IFO3134 BAA20372.1 O07078   5
 endo-α-1,5-L-arabinanase (AbnA;BSU28810) (Arb43A) 3.2.1.99 Bacillus subtilis subsp. subtilis str. 168 CAA99586.1
AAV87172.1
AIY94210.1
AQR82908.1
AQR87123.1
CAB14841.1
CAB14841.2
NP_390759.1
P94522 1UV4[A] 5
 endo-α-1,5-L-arabinanase / exo-α-1,5-L-arabinanase 43A (ArbA;CJA_0805) (Arb43A) 3.2.1.99
3.2.1.-
Cellvibrio japonicus Ueda107 ACE84667.1
CAA71485.1
B3PKP8
P95470
1GYD[B]
1GYE[B]
1GYH[A,B,C,D,E,F]
5
 α-1,5-L-arabinanase (AbnB;HUS_CDS25) (intracellular) 3.2.1.99 Geobacillus stearothermophilus T-6 NCIMB 40222 ACE73676.1 B3EYM8 3CU9[A]
3D5Y[A]
3D5Z[A]
3D60[A]
3D61[A]
5
 endo-α-1,5-L-arabinanase (Abn-ts) 3.2.1.99 Geobacillus thermodenitrificans TS-3 BAB64339.1 Q93HT9 1WL7[A] 5
 endo-α-1,5-L-arabinanase (AbnZ1) 3.2.1.99 Paenibacillus polymyxa Z6 AHA50062.1     5
 exo-α-1,5-L-arabinanase (Arn3;ARN3) 3.2.1.- uncultured bacterium ADB43999.1 D2XML8 4KCB[A,B] 5
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3DSubf
 endo-α-1,5-L-arabinanase (Ara;PcARA) 3.2.1.99 Phanerochaete chrysosporium BKM-F-1767 AFN42888.1     5
 endo-1,5-α-L-arabinanase (RmArase) 3.2.1.99 Rhizomucor miehei CAU432 AHF50152.1     5
Top




Last update: 2017-10-09 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille