Glycoside Hydrolase Family 43 / Subf 5

Activities in Familyβ-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); arabinanase (EC 3.2.1.99); xylanase (EC 3.2.1.8); galactan 1,3-β-galactosidase (EC 3.2.1.145); α-1,2-L-arabinofuranosidase (EC 3.2.1.-); exo-α-1,5-L-arabinofuranosidase (EC 3.2.1.-); [inverting] exo-α-1,5-L-arabinanase (EC 3.2.1.-); β-1,3-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Inverting
ClanGH-F
3D Structure Status5-fold β-propeller
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorGlu
NoteMany members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. in press (PMID: 26729713).
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (434); Uniprot accession (61); PDB accession (11); 3D entries (5); cryst (0)
All (414) Bacteria (403) Eukaryota (11) Structure (5) Characterized (10)
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 LK13_17205   Paenibacillus polymyxa CF05 AIY10168.1     5
 X809_03925   Paenibacillus polymyxa CR1 AHC18454.1     5
 PPE_00794   Paenibacillus polymyxa E681 ADM68644.1 E0RHQ6   5
 AOU00_16745   Paenibacillus polymyxa J AOK91325.1     5
 PPM_0818 (AbnA)   Paenibacillus polymyxa M1 CCC83755.1     5
 RE92_07610   Paenibacillus polymyxa Sb3-1 AJE50944.1     5
 PPSC2_c0886   Paenibacillus polymyxa SC2 ADO54869.1 E3ED00   5
 PPSQR21_008590   Paenibacillus polymyxa SQR-21 SQR21 AHM64519.1     5
 PPYC1_20250   Paenibacillus polymyxa YC0136 APB72562.1     5
 PPYC2_22480   Paenibacillus polymyxa YC0573 APB77547.1     5
 endo-α-1,5-L-arabinanase (AbnZ1) 3.2.1.99 Paenibacillus polymyxa Z6 AHA50062.1     5
 ASL14_07770   Paenibacillus sp. IHB B 3084 ALP36082.1     5
 HPL003_11905   Paenibacillus terrae HPL-003 AET59138.1     5
 BS614_09875   Paenibacillus xylanexedens PAMC 22703 APO48155.1     5
 AY601_0626   Pedobacter cryoconitis PAMC 27485 AMP97576.1     5
 L21SP3_00075 (Abn-ts_1)   Phycisphaerae bacterium L21-RPul-D3 AQQ08299.1     5
 L21SP3_00783 (Abn-ts_2)   Phycisphaerae bacterium L21-RPul-D3 AQQ08989.1     5
 L21SP3_02073 (Abn-ts_3)   Phycisphaerae bacterium L21-RPul-D3 AQQ10245.1     5
 STSP1_00180 (Abn-ts_1)   Phycisphaerae bacterium ST-PulAB-D4 ARN55814.1     5
 STSP1_02343 (Abn-ts_2)   Phycisphaerae bacterium ST-PulAB-D4 ARN57917.1     5
 STSP1_00575 (ArbA)   Phycisphaerae bacterium ST-PulAB-D4 ARN56201.1     5
 Prede_1105   Prevotella dentalis DSM 3688 AGB28434.1     5
 PRU_2673   Prevotella ruminicola 23 ADE82187.1 D5EXH7   5
 ORF   Prevotella sp. Sc00026 AGH13981.1     5
 PSM36_0898   Proteiniphilum saccharofermentans SCD19724.1     5
 PSM36_0898   Proteiniphilum saccharofermentans SCD19724.1     5
 A4W93_26705   Rhizobacter gummiphilus NS21 ARN23206.1     5
 Rhom172_0479   Rhodothermus marinus SG0.5JP17-172 AEN72423.1     5
 Rhom172_0480   Rhodothermus marinus SG0.5JP17-172 AEN72424.1     5
 DC20_10840   Rufibacter tibetensis 1351 ALJ01383.1     5
 Sde_0786 (Arb43E)   Saccharophagus degradans 2-40 ABD80048.1 Q21MN1   5
 Sde_1014 (Arb43D)   Saccharophagus degradans 2-40 ABD80276.1 Q21M03   5
 Sked_04520   Sanguibacter keddieii DSM 10542 ACZ20417.1 D1BKE0   5
 Sbal223_2156   Shewanella baltica OS223 ACK46658.1 B8EEQ0   5
 CF168_10300   Shewanella bicestrii JAB-1 ASK69228.1     5
 Sput200_1959   Shewanella putrefaciens 200 ADV54415.1 A2V542   5
 Sputcn32_2051   Shewanella putrefaciens CN-32 ABP75772.1 A4Y739   5
 Shewana3_2082   Shewanella sp. ANA-3 ABK48312.1 A0KWZ3   5
 CEQ32_04540   Shewanella sp. FDAARGOS_354 ASF14365.1     5
 Shewmr4_1995   Shewanella sp. MR-4 ABI39068.1 Q0HIP9   5
 Shewmr7_1980   Shewanella sp. MR-7 ABI42969.1 Q0HV86   5
 Sputw3181_1961   Shewanella sp. W3-18-1 ABM24796.1 A1RJF1   5
 sce1485   Sorangium cellulosum So ce56 CAN91643.1 A9FCA7   5
 SCE1572_09710   Sorangium cellulosum So0157-2 AGP34762.1     5
 SCE1572_29185   Sorangium cellulosum So0157-2 AGP38193.1     5
 SCE1572_23885   Sorangium cellulosum So0157-2 AGP37251.1     5
 CJD35_07400   Sphingobium sp. C1 ASY44289.1     5
 BSY17_1055 (ArbA)   Sphingobium sp. RAC03 AOF96833.1     5
 K426_04580   Sphingobium sp. TKS AMK21873.1     5
 TZ53_00010   Sphingobium sp. YBL2 AJR22409.1     5
 AWL63_05180   Sphingomonas panacis DCY99 AOH83450.1     5
 AV944_06945   Sphingomonas sp. LK11 APX67508.1     5
 BXU08_08700   Sphingomonas sp. LM7 AQR73709.1     5
 G432_06450   Sphingomonas sp. MM-1 AGH49015.1     5
 SAM23877_2482 (AbnA)   Streptomyces ambofaciens ATCC 23877 AKZ55531.1     5
 SAM40697_2281   Streptomyces ambofaciens DSM 40697 ANB06241.1     5
 SBI_07403   Streptomyces bingchenggensis BCW-1 ADI10523.1 D7C7G9   5
 SCO2427 or SCC42.08c   Streptomyces coelicolor A3(2) CAB92901.1
NP_626671.1
Q9KXY8   5
 TU94_10415   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01865.1     5
 TU94_10470   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01875.1     5
 SGLAU_11080 (AbnA)   Streptomyces glaucescens GLA.O AIR98220.1     5
 SHXM_09467   Streptomyces hygroscopicus XM201 AQW56004.1     5
 Sle_47810   Streptomyces leeuwenhoekii C34 (= DSM 42122 = NRRL B-24963) CQR64239.1     5
 Sle_47900   Streptomyces leeuwenhoekii C34 (= DSM 42122 = NRRL B-24963) CQR64248.1     5
 SLINC_2759   Streptomyces lincolnensis NRRL 2936 ANS64983.1     5
 SLINC_2772   Streptomyces lincolnensis NRRL 2936 ANS64996.1     5
 SLIV_25565 (AbnA)   Streptomyces lividans TK24 AIJ16025.1     5
 B1H29_25350   Streptomyces pactum ACT12 AQS69767.1     5
 B1H29_25320   Streptomyces pactum ACT12 AQS69761.1     5
 Sfla_0778   Streptomyces pratensis ATCC 33331 ADW02239.1 C9NF67   5
 SPRI_6594   Streptomyces pristinaespiralis HCCB 10218 ALC24900.1     5
 SPRI_6589   Streptomyces pristinaespiralis HCCB 10218 ALC24895.1     5
 M271_04130   Streptomyces rapamycinicus NRRL 5491 AGP52456.1     5
 TUE45_03001 (Abna_1)   Streptomyces reticuli CUW28270.1     5
 TUE45_03007 (Abna_2)   Streptomyces reticuli CUW28276.1     5
 SCAB_84741   Streptomyces scabiei 87.22 CBG75421.1 C9Z035   5
 SCAB_84801   Streptomyces scabiei 87.22 CBG75427.1 C9Z041   5
 CGL27_48105   Streptomyces sp. 11-1-2 ASQ99732.1     5
 SAMN05428941_2593   Streptomyces sp. 2114.2 SDT36030.1     5
 SAMN06272775_0154   Streptomyces sp. 2323.1 SOE09072.1     5
 SAMN05444521_6238   Streptomyces sp. 3124.6 SHI25417.1     5
 ASR50_11765 (fragment)   Streptomyces sp. 4F ALV50028.1     5
 NI25_26960   Streptomyces sp. CCM_MD2014 AIV36659.1     5
 F750_6082   Streptomyces sp. PAMC 26508 AGJ58509.1     5
 QR97_05025   Streptomyces sp. PBH53 AKN69263.1     5
 QR97_05055   Streptomyces sp. PBH53 AKN69269.1     5
 A4E84_12570   Streptomyces sp. S10(2016) AMW10274.1     5
 CAG99_00995   Streptomyces sp. SCSIO 03032 ARQ67595.1     5
 BW730_04380   Tessaracoccus sp. NSG39 AQP46875.1     5
 BKM78_03545   Tessaracoccus sp. T2.5-30 AQX15105.1     5
 Tter_2201   Thermobaculum terrenum ATCC BAA-798 ACZ43101.1 D1CH80   5
 Tcur_2813   Thermomonospora curvata DSM 43183 ACY98358.1 D1A6V4   5
 exo-α-1,5-L-arabinanase (Arn3;ARN3) 3.2.1.- uncultured bacterium ADB43999.1 D2XML8 4KCB[A,B] 5
 α-L-arabinofuranosidase (Orf57)   uncultured bacterium URE4 ACM91039.1 C0K009   5
 CMV30_05905   Verrucomicrobia bacterium HZ-65 ATC63526.1     5
 CMV30_05900   Verrucomicrobia bacterium HZ-65 ATC63525.1     5
 IMCC26134_08900   Verrucomicrobia bacterium IMCC26134 AKC82862.1     5
 BSQ33_17000   Vibrio gazogenes ATCC 43942 ASA57458.1     5
 BSQ33_03040   Vibrio gazogenes ATCC 43942 ASA54803.1     5
 XB05_20160   Xanthomonas campestris 17 AKC80777.1     5
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