Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 120 | 121 | 122 | 123 | 124 | 125 | 126 | 127 | 128 | 129 |
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3D
 538319   Whalleya microplaca YMJ1829 v1.0 (Whamic1)      
 544647   Whalleya microplaca YMJ1829 v1.0 (Whamic1)      
 660659   Wilcoxina mikolae CBS 423.85 (Wilmi1)      
 25835   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 94031   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 125762   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 125784   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 92023   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 29110   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 79505   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 128405   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 84014   Wolfiporia cocos MD-104 SS10 (Wolco1)      
 Pectin lyase fold/virulence factor   Xanthophyllomyces dendrorhous CED84109.1    
 Pectin lyase fold/virulence factor   Xanthophyllomyces dendrorhous CDZ96603.1    
 527120   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 399111   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 455542   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 33793   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 461195   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 524415   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 335492   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 392593   Xylaria acuta CBS 122032 v1.0 (Xylacu1)      
 484614   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 249520   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 245215   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 475821   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 479198   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 473100   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 483648   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 441418   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 90290   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 241529   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 326359   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 25847   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 419776   Xylaria arbuscula CBS 124340 v1.0 (Xylarb124340_1)      
 351667   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 321900   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 297893   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 314142   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 312425   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 60424   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 330086   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 300476   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 351254   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 321124   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 182056   Xylaria arbuscula FL1030 v1.0 (XylarbFL1030)      
 29314   Xylaria bambusicola CBS 139988 v1.0 (Xylbam139988_1)      
 642662   Xylaria bambusicola CBS 139988 v1.0 (Xylbam139988_1)      
 454839   Xylaria bambusicola CBS 139988 v1.0 (Xylbam139988_1)      
 649688   Xylaria bambusicola CBS 139988 v1.0 (Xylbam139988_1)      
 500264   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 486679   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 522852   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 484740   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 39060   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 253707   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 263813   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 140011   Xylaria cf. castorea CBS 124033 v1.0 (Xylcas124033_1)      
 508732   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 521133   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 526359   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 182007   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 502279   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 477529   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 135827   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 399086   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 510205   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 203990   Xylaria cf. heliscus FL0509 v2.0 (Xylhel2)      
 492838   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 527003   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 142932   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 499621   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 202158   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 66843   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 188165   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 146333   Xylaria cubensis CBS 116.85 v1.0 (Xylcube1)      
 190947   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 564097   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 595261   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 547551   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 577938   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 251316   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 278873   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 577279   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 137393   Xylaria curta CBS 114988 v1.0 (Xylcur114988_1)      
 432814   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 85484   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 489412   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 261128   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 515145   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 480795   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 485503   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 476983   Xylaria digitata CBS 161.22 v1.0 (Xyldig1)      
 332478   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
 419760   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
 101444   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
 517945   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
 254649   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
 330440   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
 103529   Xylaria cubensis NC1011 v1.0 (Xylcub1)      
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