Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 84 | 85 | 86 | 87 | 88 | 89 | 90 | 91 | 92 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 U0034_05445   Trinickia caryophylli HAMBI_2159 WQE12845.1    
 U0034_26915   Trinickia caryophylli HAMBI_2159 WQE14316.1    
 U0034_04450   Trinickia caryophylli HAMBI_2159 WQE12666.1    
 IDJ81_03480   Tsuneonella flava SS-21NJ QSB45217.1    
 IDJ81_03460   Tsuneonella flava SS-21NJ QSB45213.1    
 P0M28_19720   Tunicatimonas pelagia NBRC 107804 WKN41268.1    
 P0M28_08505   Tunicatimonas pelagia NBRC 107804 WKN45003.1    
 P0M28_07860   Tunicatimonas pelagia NBRC 107804 WKN44875.1    
 HLK68_12825   Turicibacter sanguinis MOL361 QJS20091.1    
 glycosyl hydrolases family 28, partial (fragment)   uncultured bacterium AMJ38573.1    
 glycosyl hydrolases family 28   uncultured bacterium AMJ38402.1    
 exo-poly-α-D-galacturonosidase, glycoside hydrolase family GH28   uncultured bacterium AOE07586.1    
 polygalacturonase (pectinase; PecJKR01; RB1) 3.2.1.67 uncultured bacterium ACL36472.1
AHG55466.1
B8YJC4  
 polygalacturonase   uncultured bacterium SIP63183.1    
 BD8803   uncultured bacterium AAW84064.1    
 BD8804   uncultured bacterium AAW84066.1    
 GH48, Polygalacturonase   uncultured bacterium VTZ55482.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91391.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91392.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91413.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91414.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91415.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91418.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91426.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91427.1    
 polygalacturonase, partial (fragment)   uncultured bacterium AFU91428.1    
 polygalacturonase (Pg_4) 3.2.1.15 uncultured bacterium AFU91007.1 K4KA83  
 polygalacturonase (fragment)   uncultured bacterium AFU91389.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91390.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91393.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91394.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91395.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91396.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91397.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91398.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91399.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91400.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91401.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91402.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91403.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91404.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91405.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91406.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91407.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91408.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91409.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91410.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91411.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91412.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91416.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91417.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91419.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91420.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91421.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91422.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91423.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91424.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91425.1    
 exo-polygalacturonase (IDSPga28-4) 3.2.1.67 uncultured bacterium UYL81905.1    
 exo-polygalacturonase (IDSPga28-16) 3.2.1.67 uncultured bacterium UYL81906.1    
 GH28   uncultured bacterium CAK9708715.1    
 GH28   uncultured bacterium CAK9708421.1    
 metaSSY_00190   uncultured bacterium BAC10G6 AGK84773.1    
 ORF   uncultured bacterium CSLG10 AEQ20322.1    
 ORF   uncultured bacterium CSLG10 AEQ20324.1    
 polygalacturose, partial (PgL) (fragment)   uncultured Bacteroides sp. AYM48175.1    
 ORF (fragment)   uncultured Bacteroides sp. AYM48174.1    
 CAZy families GH28 protein, partial (fragment)   uncultured Bacteroides sp. AIA89955.1    
 Prevot485_2730   uncultured Prevotella sp. QIM10174.1    
 Prevot485_0140   uncultured Prevotella sp. QIM09915.1    
 Prevot485_0050   uncultured Prevotella sp. QIM09906.1    
 RF679_13310   Undibacterium sp. 20NA77.5 WMW79623.1    
 RF679_13300   Undibacterium sp. 20NA77.5 WMW79621.1    
 RF679_13295   Undibacterium sp. 20NA77.5 WMW82547.1    
 UNDKW_4182   Undibacterium sp. KW1 BBB62455.1    
 UNDKW_2609   Undibacterium sp. KW1 BBB60882.1    
 UNDKW_0262   Undibacterium sp. KW1 BBB58535.1    
 UNDKW_2588   Undibacterium sp. KW1 BBB60861.1    
 UNDKW_0263   Undibacterium sp. KW1 BBB58536.1    
 UNDYM_0234   Undibacterium sp. YM2 BBB64487.1    
 UNDYM_2685   Undibacterium sp. YM2 BBB66938.1    
 UNDYM_0235   Undibacterium sp. YM2 BBB64488.1    
 UNDYM_2663   Undibacterium sp. YM2 BBB66916.1    
 HZI73_07305   Vallitalea pronyensis FatNI3 QUI22117.1    
 HZI73_21010   Vallitalea pronyensis FatNI3 QUI24630.1    
 HZI73_07295   Vallitalea pronyensis FatNI3 QUI22115.1    
 IMCC26134_08560   Verrucomicrobia bacterium IMCC26134 AKC82807.1    
 IMCC26134_12485   Verrucomicrobia bacterium IMCC26134 AKC83388.1    
 IMCC26134_12420   Verrucomicrobia bacterium IMCC26134 AKC83384.1    
 IMCC26134_12535   Verrucomicrobia bacterium IMCC26134 AKC84127.1    
 IMCC26134_09035 (fragment)   Verrucomicrobia bacterium IMCC26134 AKC82882.1    
 IMCC26134_09635   Verrucomicrobia bacterium IMCC26134 AKC82972.1    
 EGM51_01450   Verrucomicrobia bacterium S94 QBG46140.1    
 EGM51_04130   Verrucomicrobia bacterium S94 QBG46623.1    
 CMV30_05030   Verrucomicrobiota bacterium HZ-65 ATC63367.1    
 CMV30_09820   Verrucomicrobiota bacterium HZ-65 ATC64230.1    
 CMV30_10285   Verrucomicrobiota bacterium HZ-65 ATC64310.1    
 CMV30_10030   Verrucomicrobiota bacterium HZ-65 ATC64266.1    
 CMV30_11610   Verrucomicrobiota bacterium HZ-65 ATC64547.1    
 CMV30_12320   Verrucomicrobiota bacterium HZ-65 ATC64678.1    
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