Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18868); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 39 | 40 | 41 | 42 | 43 | 44 | 45 | 46 | 47 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BkAM31D_06485 (Pgl_1)   Halalkalibacter krulwichiae AM31D ARK29533.1    
 BkAM31D_06535 (Pgl_2)   Halalkalibacter krulwichiae AM31D ARK29543.1    
 Halhy_3139   Haliscomenobacter hydrossis DSM 1100 AEE51001.1    
 Halhy_4385   Haliscomenobacter hydrossis DSM 1100 AEE52229.1    
 Halhy_6803   Haliscomenobacter hydrossis DSM 1100 AEE54616.1    
 D7D81_06945   Halocella sp. SP3-1 AZO94355.1    
 P8S53_17400   Halomonas sp. M1 WFE76823.1    
 RC54_18600 (fragment)   Herbaspirillum rubrisubalbicans DSM 11543 AYR27047.1    
 Hrubri_3502   Herbaspirillum rubrisubalbicans M1 ALU90659.1    
 C798_20580 (fragment)   Herbaspirillum rubrisubalbicans Os34 QJQ02532.1    
 HBDW_14440   Herbaspirillum sp. DW155 BEV14656.1    
 Hbal_2762   Hirschia baltica ATCC 49814 ATCC 59814 ACT60435.1    
 Hbal_2763   Hirschia baltica ATCC 49814 ATCC 59814 ACT60436.1    
 K0B96_14845   Horticoccus luteus KSB-15 QYM80852.1    
 K0B96_10740   Horticoccus luteus KSB-15 QYM77797.1    
 K0B96_14740   Horticoccus luteus KSB-15 QYM78540.1    
 K0B96_15630   Horticoccus luteus KSB-15 QYM78712.1    
 K0B96_10760   Horticoccus luteus KSB-15 QYM77801.1    
 K0B96_10790   Horticoccus luteus KSB-15 QYM77807.1    
 K0B96_00810   Horticoccus luteus KSB-15 QYM79188.1    
 A4V00_00330   Hungateiclostridiaceae bacterium KB18 ANU52590.1    
 NQ487_21265   Hungatella hathewayi DSM 13479 UWO83390.1    
 NQ487_10585   Hungatella hathewayi DSM 13479 UWO87330.1    
 NQ487_14395   Hungatella hathewayi DSM 13479 UWO88017.1    
 NQ487_21790   Hungatella hathewayi DSM 13479 UWO83488.1    
 NQ487_17600   Hungatella hathewayi DSM 13479 UWO82705.1    
 MUN82_06080   Hymenobacter aerilatus 5413J-13 UOR06665.1    
 MUN82_11515   Hymenobacter aerilatus 5413J-13 UOR03575.1    
 O3303_02490   Hymenobacter canadensis PAMC 29467 WBA42435.1    
 MUN79_22005   Hymenobacter cellulosilyticus 5116S-3 UOQ71290.1    
 MUN79_16980 (fragment)   Hymenobacter cellulosilyticus 5116S-3 UOQ70428.1    
 MUN79_16975 (fragment)   Hymenobacter cellulosilyticus 5116S-3 UOQ70427.1    
 MUN80_20395   Hymenobacter cellulosivorans 5116S-27 UOQ52108.1    
 MUN80_15150   Hymenobacter cellulosivorans 5116S-27 UOQ51096.1    
 MUN80_15590   Hymenobacter cellulosivorans 5116S-27 UOQ51184.1    
 FHG12_16800   Hymenobacter jejuensis 17J68-5 QDA61654.1    
 FHG12_04660   Hymenobacter jejuensis 17J68-5 QDA59437.1    
 FHG12_16690   Hymenobacter jejuensis 17J68-5 QDA61633.1    
 FHG12_00045   Hymenobacter jejuensis 17J68-5 QDA58587.1    
 FHG12_16615   Hymenobacter jejuensis 17J68-5 QDA61619.1    
 MTP16_13595   Hymenobacter monticola KACC 22596 UOE32163.1    
 MTP16_09225   Hymenobacter monticola KACC 22596 UOE35810.1    
 DDQ68_01205   Hymenobacter nivis NBRC 111535 AWM31525.1    
 DDQ68_01370   Hymenobacter nivis NBRC 111535 AWM31556.1    
 A0257_09950   Hymenobacter psoromatis PAMC 26554 AMR27387.1    
 A0257_06185   Hymenobacter psoromatis PAMC 26554 AMR29643.1    
 A0257_06915   Hymenobacter psoromatis PAMC 26554 AMR29654.1    
 A0257_01755   Hymenobacter psoromatis PAMC 26554 AMR25945.1    
 H9L05_16230   Hymenobacter qilianensis JCM 19763 QNP51532.1    
 H9L05_00720 (fragment)   Hymenobacter qilianensis JCM 19763 QNP52365.1    
 H9L05_00725 (fragment)   Hymenobacter qilianensis JCM 19763 QNP52366.1    
 H9L05_20655   Hymenobacter qilianensis JCM 19763 QNP52225.1    
 H9L05_14980   Hymenobacter qilianensis JCM 19763 QNP51347.1    
 AUC43_09265   Hymenobacter sedentarius DG5B ALW85269.1    
 AUC43_01985   Hymenobacter sedentarius DG5B ALW83974.1    
 H4317_07010   Hymenobacter sediminicola S2-20-2 QNH63535.1    
 H4317_12730   Hymenobacter sediminicola S2-20-2 QNH61039.1    
 H4317_06920   Hymenobacter sediminicola S2-20-2 QNH63518.1    
 MUN81_16335   Hymenobacter sp. 5317J-9 UOQ96804.1    
 MUN81_16260   Hymenobacter sp. 5317J-9 UOQ96789.1    
 MUN81_16115   Hymenobacter sp. 5317J-9 UOQ96760.1    
 MUN81_18770   Hymenobacter sp. 5317J-9 UOQ97269.1    
 MUN81_20235   Hymenobacter sp. 5317J-9 UOQ97548.1    
 MUN84_19165   Hymenobacter sp. 5516J-16 UOQ76622.1    
 GKZ68_10625   Hymenobacter sp. BRD128 QKG57043.1    
 GKZ68_09730 (fragment)   Hymenobacter sp. BRD128 QKG56881.1    
 GKZ67_14290 (fragment)   Hymenobacter sp. BRD67 QKG53550.1    
 GKZ67_10190   Hymenobacter sp. BRD67 QKG52908.1    
 GUY19_07110   Hymenobacter sp. BT182 QHJ07064.1    
 GUY19_05425   Hymenobacter sp. BT182 QHJ06765.1    
 SD425_10235   Hymenobacter sp. GOD-10R WRQ30638.1    
 SD425_28095   Hymenobacter sp. GOD-10R WRQ31561.1    
 SD425_08585   Hymenobacter sp. GOD-10R WRQ30315.1    
 SD425_09680   Hymenobacter sp. GOD-10R WRQ30529.1    
 SD425_29025   Hymenobacter sp. GOD-10R WRQ31880.1    
 SD425_08630   Hymenobacter sp. GOD-10R WRQ30323.1    
 SD425_02275   Hymenobacter sp. GOD-10R WRQ29088.1    
 SD425_25465   Hymenobacter sp. GOD-10R WRQ28424.1    
 SD425_23890   Hymenobacter sp. GOD-10R WRQ28111.1    
 SD425_21435   Hymenobacter sp. GOD-10R WRQ27637.1    
 G7064_18960   Hymenobacter sp. HDW8 QIL77687.1    
 G7064_19030   Hymenobacter sp. HDW8 QIL77698.1    
 G7064_18025   Hymenobacter sp. HDW8 QIL78109.1    
 G7064_04265   Hymenobacter sp. HDW8 QIL75147.1    
 F1C16_08300   Hymenobacter sp. NBH84 QNE39550.1    
 AXW84_07115 (fragment)   Hymenobacter sp. PAMC 26628 AMJ65219.1    
 AXW84_07120 (fragment)   Hymenobacter sp. PAMC 26628 AMJ65220.1    
 AXW84_13485   Hymenobacter sp. PAMC 26628 AMJ66331.1    
 AXW84_07110 (fragment)   Hymenobacter sp. PAMC 26628 AMJ65218.1    
 MWH26_05135   Hymenobacter sublimis 5516S-25 UPL50292.1    
 Hsw_1534   Hymenobacter swuensis DY53 AHJ97129.1    
 HMJ29_14000   Hymenobacter taeanensis TS19 QJX47991.1    
 MTX78_14200   Hymenobacter tibetensis KACC 21982 UOG73276.1    
 MTX78_14235   Hymenobacter tibetensis KACC 21982 UOG73281.1    
 MTX78_08055   Hymenobacter tibetensis KACC 21982 UOG76542.1    
 MTX78_23355   Hymenobacter tibetensis KACC 21982 UOG77286.1    
 MTX78_08265   Hymenobacter tibetensis KACC 21982 UOG76583.1    
 MTX78_08260   Hymenobacter tibetensis KACC 21982 UOG76582.1    
 MTX78_05020   Hymenobacter tibetensis KACC 21982 UOG75962.1    
 MUN86_29120   Hymenobacter volaticus 5420S-77 UOQ69684.1    
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