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Glycoside Hydrolase Family 13 / Subf 28

Activities in Sub Family[retaining] α-amylase (EC 3.2.1.1);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (27); Uniprot accession (27); PDB accession (3); 3D entries (2); cryst (0)
Summary
Download GH13_28 (858) Taxonomic display Structure (2) Characterized (23)
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Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 KGE51_00165   Lactobacillus amylovorus 1394N20 UIK35139.1     28
 LA20531_05825   Lactobacillus amylovorus DSM 20531 ATO53165.1     28
 G8B20_10035   Lactobacillus amylovorus L4 UNL46998.1     28
 α-amylase (AmyA) 3.2.1.1 Lactobacillus amylovorus NRRL B-45 AAC45781.1
ABO77965.1
CAA56557.1		 A4ULJ3
Q48502
Q79AD6		   28
 E7746_05550   Muribaculum gordoncarteri TLL-A4 QCD35398.1     28
 A4V02_04735   Muribaculum intestinale YL27 ANU63086.1
ANU63086.2		     28
 ADH68_13035   Muribaculum intestinale YL27 ASB38837.1
QQR09576.1		     28
 E7747_13255   Muribaculum sp. H5 QCD43159.1     28
 SAMN05444162_2960   Paenibacillaceae bacterium GAS479 SDT05525.1     28
 HGI30_20170   Paenibacillus albicereus UniB2 QJC53615.1     28
 B4V02_12330   Paenibacillus kribbensis AM49 ASR47410.1     28
 MLD56_12265   Paenibacillus peoriae ZBSF16 UMY57164.1     28
 U3G77_15550   Paenibacillus polymyxa DSM 365 WRL59573.1     28
 PPYC1_12720   Paenibacillus polymyxa YC0136 APB71173.1
APB71173.2		     28
 FQU75_04075   Paenibacillus polymyxa ZF197 QDY86356.1     28
 GE073_21730   Paenibacillus sp. B01 QGG57929.1     28
 GE073_21735   Paenibacillus sp. B01 QGG58913.1     28
 DCC85_10610   Paenibacillus sp. CAA11 AWB44629.1     28
 KAI37_02544 (AmyE)   Paenibacillus sp. S25 QYK62214.1     28
 HPL003_21345   Paenibacillus terrae HPL-003 AET60999.1     28
 NEE14_014850   Parabacteroides sp. AD58 WWV66237.1     28
 J5A62_00710   Prevotella histicola F0411 QUB83913.1     28
 HMPREF0669_01193   Prevotella sp. oral taxon 299 str. F0039 EFC70738.1     28
 FXF36_11320   Pseudobutyrivibrio xylanivorans MA3014 QFJ55411.1     28
 NCTC11451_00348 (Amye_2)   Pseudomonas aeruginosa NCTC11451 VTR39713.1     28
 NCTC11451_00347 (Amye_1)   Pseudomonas aeruginosa NCTC11451 VTR39706.1     28
 E5Z56_02515   Ruminococcus bovis JE7A12 QCT06294.1     28
 RBR_20490 (Amy9)   Ruminococcus bromii L2-63 CBL16180.1     28
 LCN94_05925   Ruminococcus sp. FMB-CY1 WBX58640.1     28
 LCN94_10585   Ruminococcus sp. FMB-CY1 WBX57327.1     28
 LCN94_03440   Ruminococcus sp. FMB-CY1 WBX58169.1     28
 KGF34_04850   Ruminococcus sp. FMBCY1 USP70663.1     28
 KGF34_09410   Ruminococcus sp. FMBCY1 USP69378.1     28
 KGF34_02375   Ruminococcus sp. FMBCY1 USP70196.1     28
 RJT10_01565   Segatella copri H-2379 WOF94178.1     28
 RJT00_02870   Segatella copri H-2446 MDV3112315.1     28
 RJT04_01415   Segatella copri H-2477 WOG32312.1     28
 RJT05_01310   Segatella copri H-2489 WOF88015.1     28
 RJT12_03715   Segatella copri H-2497 WOF97876.1     28
 RJT09_03105   Segatella copri H-2632 MDV3105458.1     28
 FO447_13405   Segatella copri YF2 QNT67433.1     28
 K6973_01865   Streptococcus dysgalactiae DY107 QZT27520.1     28
 I6I44_04885   Streptococcus dysgalactiae FDAARGOS_1087 QQY18218.1     28
 FOB62_03410   Streptococcus dysgalactiae FDAARGOS_654 QET82412.1     28
 FOB62_03415 (fragment)   Streptococcus dysgalactiae FDAARGOS_654 QET82413.1     28
 FGCSD_0346 (Amye_2)   Streptococcus dysgalactiae Kdys0611 BBE39572.1     28
 FGCSD_0345 (Amye_1)   Streptococcus dysgalactiae Kdys0611 BBE39571.1     28
 NCTC6403_00370 (Amye_1)   Streptococcus dysgalactiae NCTC6403 VTS97211.1     28
 NCTC6403_00371 (Amye_2)   Streptococcus dysgalactiae NCTC6403 VTS97217.1     28
 EBL83_01500   Streptococcus dysgalactiae SCDR-SD1 QFZ09011.1     28
 EBL83_01495   Streptococcus dysgalactiae SCDR-SD1 QFZ09010.1     28
 EA456_09740   Streptococcus dysgalactiae subsp. dysgalactiae DB31752-13 QGH00714.1     28
 EA456_09735   Streptococcus dysgalactiae subsp. dysgalactiae DB31752-13 QGH00713.1     28
 EA459_03155   Streptococcus dysgalactiae subsp. dysgalactiae DB49998-05 QGG97736.1     28
 EA459_03160   Streptococcus dysgalactiae subsp. dysgalactiae DB49998-05 QGG97737.1     28
 EA457_01830   Streptococcus dysgalactiae subsp. dysgalactiae DB60705-15 QGH01376.1     28
 EA457_01825   Streptococcus dysgalactiae subsp. dysgalactiae DB60705-15 QGH01375.1     28
 NCTC4669_00356 (Amye_2) (fragment)   Streptococcus dysgalactiae subsp. dysgalactiae NCTC4669 VDZ39594.1     28
 NCTC4669_00358 (Amye_4)   Streptococcus dysgalactiae subsp. dysgalactiae NCTC4669 VDZ39596.1     28
 NCTC4669_00357 (Amye_3) (fragment)   Streptococcus dysgalactiae subsp. dysgalactiae NCTC4669 VDZ39595.1     28
 EA458_03815   Streptococcus dysgalactiae subsp. dysgalactiae STREP97-15 QGH03716.1     28
 EA458_03820   Streptococcus dysgalactiae subsp. dysgalactiae STREP97-15 QGH03717.1     28
 SDSE159_02680   Streptococcus dysgalactiae subsp. equisimilis 159 BCK49011.1     28
 SDSE159_02670 (fragment)   Streptococcus dysgalactiae subsp. equisimilis 159 BCK49010.1     28
 SDSE167_0352 (AmyE)   Streptococcus dysgalactiae subsp. equisimilis 167 BAN92751.1     28
 SDSE167_0351 (AmyE) (fragment)   Streptococcus dysgalactiae subsp. equisimilis 167 BAN92750.1     28
 SDSE89_02780 (fragment)   Streptococcus dysgalactiae subsp. equisimilis 89 BCK46946.1     28
 SDSE89_02790   Streptococcus dysgalactiae subsp. equisimilis 89 BCK46947.1     28
 SDSE89_02770 (fragment)   Streptococcus dysgalactiae subsp. equisimilis 89 BCK46945.1     28
 SDSE_0336 (AmyE) (fragment)   Streptococcus dysgalactiae subsp. equisimilis AC-2713 CCI61841.1     28
 SDSE_0337 (AmyE) (fragment)   Streptococcus dysgalactiae subsp. equisimilis AC-2713 CCI61842.1     28
 SDSE_0338 (AmyE)   Streptococcus dysgalactiae subsp. equisimilis AC-2713 CCI61843.1     28
 SDE12394_01520 (fragment)   Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 ADX23850.1     28
 SDE12394_01525   Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 ADX23851.1     28
 SDEG_0325 (AmyE)   Streptococcus dysgalactiae subsp. equisimilis GGS_124 BAH80834.1     28
 SDEG_0326 (AmyE)   Streptococcus dysgalactiae subsp. equisimilis GGS_124 BAH80835.1     28
 ML603_01505   Streptococcus dysgalactiae subsp. equisimilis Karl UMY68398.1     28
 ML603_01500   Streptococcus dysgalactiae subsp. equisimilis Karl UMY68397.1     28
 MGCS35823_00744   Streptococcus dysgalactiae subsp. equisimilis MGCS35823 WEQ87929.1     28
 MGCS35922_00746   Streptococcus dysgalactiae subsp. equisimilis MGCS35922 WEQ85837.1     28
 MGCS35957_00718   Streptococcus dysgalactiae subsp. equisimilis MGCS35957 WEQ83718.1     28
 MGCS36044_00738   Streptococcus dysgalactiae subsp. equisimilis MGCS36044 WEQ81763.1     28
 MGCS36083_00746   Streptococcus dysgalactiae subsp. equisimilis MGCS36083 WEQ77696.1     28
 MGGS36055_00712   Streptococcus dysgalactiae subsp. equisimilis MGGS36055 WEQ79735.1     28
 NCTC11554_00364 (Amye_2)   Streptococcus dysgalactiae subsp. equisimilis NCTC11554 VTT13947.1     28
 NCTC11554_00363 (Amye_1) (fragment)   Streptococcus dysgalactiae subsp. equisimilis NCTC11554 VTT13946.1     28
 NCTC11556_00346 (Amye_2) (fragment)   Streptococcus dysgalactiae subsp. equisimilis NCTC11556 VTT19860.1     28
 NCTC11556_00345 (Amye_1) (fragment)   Streptococcus dysgalactiae subsp. equisimilis NCTC11556 VTT19858.1     28
 NCTC11556_00347 (Amye_3)   Streptococcus dysgalactiae subsp. equisimilis NCTC11556 VTT19862.1     28
 NCTC5370_01619 (Amye_1)   Streptococcus dysgalactiae subsp. equisimilis NCTC5370 SQE86386.1     28
 NCTC5370_01620 (Amye_2)   Streptococcus dysgalactiae subsp. equisimilis NCTC5370 SQE86387.1     28
 NCTC5371_00353 (Amye_2) (fragment)   Streptococcus dysgalactiae subsp. equisimilis NCTC5371 SQF77273.1     28
 NCTC5371_00352 (Amye_1) (fragment)   Streptococcus dysgalactiae subsp. equisimilis NCTC5371 SQF77272.1     28
 NCTC5371_00354 (Amye_3)   Streptococcus dysgalactiae subsp. equisimilis NCTC5371 SQF77274.1     28
 NCTC6179_00369 (Amye_2)   Streptococcus dysgalactiae subsp. equisimilis NCTC6179 SQF66216.1     28
 NCTC6179_00368 (Amye_1)   Streptococcus dysgalactiae subsp. equisimilis NCTC6179 SQF66215.1     28
 NCTC6181_00316 (Amye_2)   Streptococcus dysgalactiae subsp. equisimilis NCTC6181 VEF04475.1     28
 NCTC6181_00315 (Amye_1)   Streptococcus dysgalactiae subsp. equisimilis NCTC6181 VEF04474.1     28
 NCTC7136_00383 (Amye_3)   Streptococcus dysgalactiae subsp. equisimilis NCTC7136 SQG92216.1     28
 NCTC7136_00382 (Amye_2) (fragment)   Streptococcus dysgalactiae subsp. equisimilis NCTC7136 SQG92215.1     28
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