Activities in Sub Family	[retaining] α-amylase (EC 3.2.1.1);
Mechanism	Retaining a
Clan	GH-H
3D Structure Status	( β / α ) 8 barrel
Catalytic Nucleophile/Base	Asp (experimental)
Catalytic Proton Donor	Glu (experimental)
Note	New: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resources	CAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)	MEGAZYME; PROZOMIX;
Statistics	GenBank accession (27); Uniprot accession (27); PDB accession (3); 3D entries (2); cryst (0)

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Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D	Subf
BS3272_01590		Bifidobacterium subtile KCTC 3272	QOL37458.1			28
NQ527_05700		Butyrivibrio crossotus DSM 2876	UWO51779.1			28
α-amylase (AmyA) (Amy13B)	3.2.1.1	Butyrivibrio fibrisolvens 16/4	CAE17325.1 CBK74052.1	Q70JA8 V5ISH0		28
α-amylase (AmyA)	3.2.1.1	Butyrivibrio fibrisolvens H17C	AAA23005.1	P30269		28
bpr_I1087		Butyrivibrio proteoclasticus B316	ADL33827.1			28
Clole_0109		Cellulosilyticum lentocellum DSM 5427	ADZ81868.1			28
EKH84_03635		Cellulosilyticum sp. WCF-2	QEH67537.1			28
α-amylase (AmyA;AmyP;CAP0168)	3.2.1.1	Clostridium acetobutylicum ATCC 824	AAD47072.1 AAA63759.1 AAA63759.2 AAK76913.1 NP_149331.1	P23671		28
CAP0098		Clostridium acetobutylicum ATCC 824	AAK76843.1 NP_149261.1			28
SMB_P166 (AmyA)		Clostridium acetobutylicum DSM 1731	AEI34909.1			28
SMB_P096 (AmyA)		Clostridium acetobutylicum DSM 1731	AEI34839.1			28
CEA_P0166		Clostridium acetobutylicum EA 2018	ADZ22949.1			28
CEA_P0097 (AmyA)		Clostridium acetobutylicum EA 2018	ADZ22880.1			28
DK921_20050		Clostridium acetobutylicum LJ4	AWV82385.1			28
DK921_19500		Clostridium acetobutylicum LJ4	AWV82280.1			28
CLAUR_026450		Clostridium aurantibutyricum DSM 793	URZ02633.1			28
Cbs_0664		Clostridium beijerinckii ATCC 35702 SA-1	AIU01762.1			28
CLBIJ_06810 (AmyE)		Clostridium beijerinckii BAS/B3/I/124	AQS03274.1			28
KDJ94_03685		Clostridium beijerinckii CBEI	QUF74843.1			28
OD350_27085		Clostridium beijerinckii CloBei18h	UYZ35807.1			28
CIBE_0834 (AmyA)		Clostridium beijerinckii DSM 6423	CUU45913.1			28
LF65_00739		Clostridium beijerinckii NCIMB 14988	AJG97367.1			28
Cbei_0664		Clostridium beijerinckii NCIMB 8052	ABR32851.1			28
X276_23470		Clostridium beijerinckii NRRL B-598	ALB48017.1			28
CM240_3315		Clostridium bornimense M2/40	CDM70432.1			28
CM240_0729		Clostridium bornimense M2/40	CDM67894.1			28
CM240_0788		Clostridium bornimense M2/40	CDM67953.1			28
HLV60_02295		Clostridium butyricum 16-3	QJU43232.1			28
HLV60_08970		Clostridium butyricum 16-3	QJU44491.1			28
FBD77_10280		Clostridium butyricum 29-1	QCJ02959.1			28
FBD77_13855		Clostridium butyricum 29-1	QCJ03582.1			28
FBD76_15640		Clostridium butyricum 4-1	QCJ07723.1			28
FBD76_04595		Clostridium butyricum 4-1	QCJ05706.1			28
α-amylase, partial (fragment)		Clostridium butyricum BOH3	AGM70963.1			28
Q9978_10965		Clostridium butyricum CBM588	WLS66794.1			28
Q9978_14610		Clostridium butyricum CBM588	WLS67500.1			28
KDJ93_13595		Clostridium butyricum CBUT	QUF82755.1			28
KDJ93_07520		Clostridium butyricum CBUT	QUF84740.1			28
NPD4_1069 (Kra2)		Clostridium butyricum CDC_51208	APF23593.1			28
NPD4_2264 (AmyE)		Clostridium butyricum CDC_51208	APF22363.1			28
HNS01_07970		Clostridium butyricum CFSA-TJ-E	UTY53027.1			28
HNS01_14860		Clostridium butyricum CFSA-TJ-E	UTY54318.1			28
EBL75_17995		Clostridium butyricum CFSA3987	QGH23398.1			28
EBL75_12280		Clostridium butyricum CFSA3987	QGH22310.1			28
EBQ27_17995		Clostridium butyricum CFSA3989	QGH27441.1			28
EBQ27_12285		Clostridium butyricum CFSA3989	QGH26349.1			28
QVH08_08885		Clostridium butyricum DKU-11	WJV35704.1			28
QVH08_15605		Clostridium butyricum DKU-11	WJV33653.1			28
JZY05_07880		Clostridium butyricum DS501	QSX04289.1			28
JZY05_14545		Clostridium butyricum DS501	QSX02258.1			28
FF104_03415		Clostridium butyricum DSM 10702	QMW90028.1			28
FF104_09925		Clostridium butyricum DSM 10702	QMW91264.1			28
ATD26_10055		Clostridium butyricum JKY6D1	ALS17193.1			28
ATD26_13495		Clostridium butyricum JKY6D1	ALS17853.1			28
ATN24_14795		Clostridium butyricum KNU-L09	ALP91358.1			28
ATN24_11260		Clostridium butyricum KNU-L09	ALP90690.1			28
Cbu04g_15610 (AmyA)		Clostridium butyricum NBRC 13949	BBK76553.1			28
Cbu04g_29020		Clostridium butyricum NBRC 13949	BBK77894.1			28
DRB99_09340		Clostridium butyricum S-45-5	AXB85164.1			28
DRB99_02925		Clostridium butyricum S-45-5	AXB83939.1			28
BBB49_13135		Clostridium butyricum TK520	AOR94988.1			28
BBB49_09890		Clostridium butyricum TK520	AOR94378.1			28
AZ909_09710		Clostridium butyricum TOA	ANF14313.1			28
AZ909_13250		Clostridium butyricum TOA	ANF14979.1			28
O4N14_07910		Clostridium butyricum WQ1	WBQ00539.1			28
O4N14_14635		Clostridium butyricum WQ1	WBP98496.1			28
F3K33_03745		Clostridium diolis DSM 15410	QES71965.1			28
LL033_15160		Clostridium estertheticum CF002	WAG53984.1			28
KTC95_12935		Clostridium estertheticum CF004	WLC87072.1			28
KTC97_03015		Clostridium estertheticum CF008	WLC84779.1			28
LL032_12565		Clostridium estertheticum DSM 14864	WAG72022.1			28
A7L45_18000		Clostridium estertheticum subsp. estertheticum DSM 8809	APC41824.1			28
CLFE_044790		Clostridium felsineum DSM 794	URZ18409.1			28
CLFE_045800 (AmyE) (fragment)		Clostridium felsineum DSM 794	URZ18492.1			28
psyc5s11_17620 (AmyA)		Clostridium gelidum C5S11	BCZ45695.1			28
C1I91_06960 (fragment)		Clostridium manihotivorum CT4	QAA31402.1			28
CNEO_4275		Clostridium neonatale	CAH0438804.1			28
CLROS_000280		Clostridium roseum DSM 6424	URZ04719.1			28
CROST_003850		Clostridium roseum DSM 7320	URZ09692.1			28
CSACC_41330 (AmyE)		Clostridium saccharobutylicum BAS/B3/SW/136	AQS02300.1			28
CLSA_c41560		Clostridium saccharobutylicum DSM 13864	AGX45116.1			28
CLOSACC_41330 (AmyE)		Clostridium saccharobutylicum NCP 195	AQS16283.1			28
CLOSC_41270 (AmyE)		Clostridium saccharobutylicum NCP 200	AQR92397.1			28
CLOBY_40620 (AmyE)		Clostridium saccharobutylicum NCP 258	AQS11904.1			28
α-amylase, partial (AmyA)		Clostridium sp. BOH3	AKZ32075.1			28
α-amylase (AmyB)		Clostridium sp. BOH3	AKZ32076.1			28
LL036_10565 (fragment)		Clostridium sp. CF011	WAG68548.1			28
KTC94_08930 (fragment)		Clostridium sp. CM028	WLC60340.1			28
ONV75_10585		Clostridium sp. LQ25	UZT05034.1			28
ONV75_14005		Clostridium sp. LQ25	UZT05694.1			28
AXY43_18030		Clostridium sp. MF28	AVK49730.1			28
FDZ78_13975		Duncaniella sp. B8	QCP73835.1			28
E7745_10515		Duncaniella sp. C9	QCD40786.1			28
QZL54_12950		Enterococcus lactis SU-B46	WKK09493.1			28
KIW23_02480		Floricoccus penangensis ML061-4	URZ87933.1			28
HF295_07125		Hujiaoplasma nucleasis zrk29	QLY40627.1			28
lbkm_2055		Lachnospiraceae bacterium KM106-2	BBF43367.1			28
α-amylase (AmyA)	3.2.1.1	Lacticaseibacillus manihotivorans LMG 18010T	AAD45245.1 AAC24760.1	O85007 Q9XCV8		28
α-amylase	3.2.1.1	Lactiplantibacillus plantarum A6	AAC45780.1	O06915		28
α-amylase	3.2.1.1	Lactiplantibacillus plantarum S21	AHX97726.1			28
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