Glycoside Hydrolase Family 13 / Subf 1

Activities in Sub Family	[retaining] 4-α-glucanotransferase / amylomaltase (EC 2.4.1.25); [retaining] α-amylase (EC 3.2.1.1); [retaining] maltotriose-producing α-amylase (EC 3.2.1.116);
Mechanism	Retaining a
Clan	GH-H
3D Structure Status	( β / α ) ₈ barrel
Catalytic Nucleophile/Base	Asp (experimental)
Catalytic Proton Donor	Glu (experimental)
Note	New: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resources	CAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)	MEGAZYME; PROZOMIX;
Statistics	GenBank accession (1641); Uniprot accession (56); PDB accession (22); 3D entries (9); cryst (0)

Summary

Download GH13_1 (2101) Taxonomic display Structure (9) Characterized (47)

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Eukaryota
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D	Subf
92881		Postia placenta MAD 698-R v1.0 (Pospl1)				1
1160363		Postia placenta MAD-698-R-SB12 v1.0 (PosplRSB12_1)				1
1062176		Postia placenta MAD-698-R-SB12 v1.0 (PosplRSB12_1)				1
1158324		Postia placenta MAD-698-R-SB12 v1.0 (PosplRSB12_1)				1
404092		Protomyces lactucaedebilis 12-1054 v1.0 (Prola1)				1
400607		Protomyces lactucaedebilis 12-1054 v1.0 (Prola1)				1
5072		Pseudogymnoascus destructans 20631-21 (Pseudest1)				1
5071		Pseudogymnoascus destructans 20631-21 (Pseudest1)				1
α-amylase (AmyA1)	3.2.1.1	Pseudogymnoascus pannorum ( formerly Geomyces pannorum)	AMR43301.1			1
α-amylase (A1)		Pseudogymnoascus pannorum R1-2	AHN65135.1			1
α-amylase (A2)		Pseudogymnoascus pannorum R1-2	AHN65136.1			1
347874		Pseudomassariella vexata CBS 129021 v1.0 (Pseve2)				1
528028		Pseudomassariella vexata CBS 129021 v1.0 (Pseve2)				1
514625		Pseudomassariella vexata CBS 129021 v1.0 (Pseve2)				1
476568		Pseudovirgaria hyperparasitica CBS 121739 v1 (Psehy1)				1
641		Pseudovirgaria hyperparasitica CBS 121739 v1 (Psehy1)				1
80746		Pseudozyma antarctica T-34 (Psean1_1)				1
82417		Psilocybe cubensis v1.0 (Psicub1_1)				1
54367		Psilocybe serbica v1.0 (Psiser1)				1
551987		Pterula gracilis CBS309.79 v1.0 (Ptegra1)				1
575814		Pterula gracilis CBS309.79 v1.0 (Ptegra1)				1
4270		Purpureocillium lilacinum PLFJ-1 (Purli1)				1
JDV02_008220		Purpureocillium takamizusanense PT3	UNI22321.1			1
137248		Pycnoporus puniceus CIRM-BRFM 1868 v1.0 (Pycpun1)				1
482042		Pycnoporus puniceus CIRM-BRFM 1868 v1.0 (Pycpun1)				1
1586405		Pycnoporus sanguineus BRFM1264 v1 (Pycsa1)				1
1682233		Pycnoporus sanguineus BRFM1264 v1 (Pycsa1)				1
570009		Pyrenochaeta lycopersici ISPaVe ER 1252 v1.0 (Pyrly1)				1
514983		Pyrenochaeta lycopersici ISPaVe ER 1252 v1.0 (Pyrly1)				1
123345		Pyrenochaeta sp. DS3sAY3a v1 (Pyrsp1)				1
548231		Pyrenochaeta sp. DS3sAY3a v1 (Pyrsp1)				1
PTTW11_04279		Pyrenophora teres f. teres	CAE7027619.1			1
6864		Pyrenophora teres f. teres (Pyrtt1)				1
PoMZ_12451		Pyricularia oryzae	QBZ65490.1			1
PoMZ_12950 (fragment)		Pyricularia oryzae	QBZ65983.1			1
PoMZ_13455		Pyricularia oryzae	QBZ66476.1			1
MG09640.4		Pyricularia oryzae 70-15	XP_364795.1			1
MG10209.4		Pyricularia oryzae 70-15	XP_365989.1			1
MGG_12595		Pyricularia oryzae 70-15	XP_003720977.1 XP_366696.1			1
12759		Magnaporthe oryzae 70-15 v3.0 (Magor1)				1
12293		Magnaporthe oryzae 70-15 v3.0 (Magor1)				1
8681		Pyronema confluens omphalodes (Pyrco1)				1
345137		Pyronema domesticum DOB7353 v1.0 (Pyrdom1)				1
283536		Pyronema omphalodes DOB1672 v1.0 (Pyrom1)				1
1331111		Ramaria rubella (R. acris) UT-36052-T v1 (Ramac1)				1
1653468		Ramaria rubella (R. acris) UT-36052-T v1 (Ramac1)				1
maltotrise-forming α-amylase		Rasamsonia emersonii	ALG76587.1			1
α-amylase Amy13A		Rasamsonia emersonii JCM23024	AMQ75909.1			1
418550		Rhexocercosporidium sp. MPI-PUGE-AT-0058 (Rhesp1)				1
RhiXN_03069 (fragment)		Rhizoctonia solani AG-1 IA	QRW18145.1			1
RhiXN_00479		Rhizoctonia solani AG-1 IA	QRW19073.1			1
1680		Rhizoctonia solani AG-1 IB (Rhiso1)				1
4290		Rhizoctonia solani AG-1 IB (Rhiso1)				1
11122		Rhizoctonia solani AG-3 Rhs1AP (Rhisol1)				1
3664		Rhizoctonia solani AG-3 Rhs1AP (Rhisol1)				1
2735		Rhizoctonia solani AG-8 WAC10335 (Rhisola1)				1
9803		Rhizoctonia solani AG-8 WAC10335 (Rhisola1)				1
α-amylase		Rhizomucor miehei	AYE89278.1			1
α-amylase (RpAM)	3.2.1.1	Rhizomucor pusillus	CAH04003.1 CAX51637.1	M9TI89	6SAV[A,B]	1
α-amylase (Amy; RpAmy)	3.2.1.1	Rhizomucor pusillus GX-3	AGJ52081.1	M9TI89		1
826621		Rhizophagus cerebriforme DAOM 227022 v1.0 (Rhice1_1)				1
705560		Rhizophagus diaphanus v1.0 (Rhidi1)				1
528013		Rhizophagus irregularis A4 v1.0 (RhiirA4)				1
391553		Rhizophagus irregularis A5 v1.0 (RhiirA5)				1
glycoside hydrolase family 13 (Gh13B) (fragment)		Rhizophlyctis rosea	AWM99293.1			1
2019		Rhizopogon vesiculosus Smith (Rhives1)				1
735273		Rhizopogon vinicolor AM-OR11-026 v1 (Rhivi1)				1
α-amylase (Amy;RoAmy)	3.2.1.1	Rhizopus arrhizus CICIM F0071	ADL28123.1	E2G4G0		1
α-amylase		Rhizopus arrhizus NRRL 2871	APW78050.1			1
4968		Rhizopus microsporus var. chinensis CCTCC M201021 (Rhich1)				1
15299		Rhizopus microsporus var. chinensis CCTCC M201021 (Rhich1)				1
311068		Rhizopus microsporus var. microsporus ATCC52813 v1.0 (Rhimi1_1)				1
294782		Rhizopus microsporus var. microsporus ATCC52814 v1.0 (Rhimi_ATCC52814_1)				1
584780		Rhizoscyphus ericae UAMH 7357 v1 (Rhier1)				1
1214933		Rhodocollybia butyracea AH 40177 v1.0 (Rhobut1_1)				1
796145		Rhodofomes (Fomitopsis) roseus CIRM-BRFM 1785 v1.0 (Fomros1)				1
897795		Rhodofomes (Fomitopsis) roseus CIRM-BRFM 1785 v1.0 (Fomros1)				1
833243		Rhodofomes (Fomitopsis) roseus CIRM-BRFM 1785 v1.0 (Fomros1)				1
719190		Rhodofomes (Fomitopsis) roseus CIRM-BRFM 1785 v1.0 (Fomros1)				1
2472540		Rickenella fibula HBK330-10 v1.0 (Ricfib1)				1
924456		Rigidoporus microporus ED310 (Rigmic1)				1
485231		Rostrohypoxylon terebratum CBS 119137 v1.0 (Roster1)				1
1008070		Russula brevipes BPL707 v1.0 (Rusbre1)				1
1041428		Russula brevipes BPL707 v1.0 (Rusbre1)				1
986517		Russula compacta BPL669 v1.0 (Ruscom1)				1
856512		Russula compacta BPL669 v1.0 (Ruscom1)				1
1710		Russula compacta BPL669 v1.0 (Ruscom1)				1
1163955		Russula dissimulans BPL704 v1.0 (Rusdis1)				1
1123913		Russula dissimulans BPL704 v1.0 (Rusdis1)				1
1120076		Russula dissimulans BPL704 v1.0 (Rusdis1)				1
1150245		Russula earlei BPL698 v1.0 (Rusear1)				1
1011562		Russula earlei BPL698 v1.0 (Rusear1)				1
748738		Russula ochroleuca Prilba v1.0 (Rusoch1)				1
773847		Russula ochroleuca Prilba v1.0 (Rusoch1)				1
955976		Russula rugulosa BPL654 v1.0 (Rusrug1)				1
995385		Russula rugulosa BPL654 v1.0 (Rusrug1)				1
983334		Russula vinacea BPL710 v1.0 (Rusvin1)				1
1071391		Russula vinacea BPL710 v1.0 (Rusvin1)				1
59718		Saccharata proteae CBS 121410 v1 (Sacpr1)				1
α-amylase (Alp1; Sfamy)	3.2.1.1	Saccharomycopsis fibuligera	CAA29233.1 ADU24597.1	E7D897 P21567		1
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