Glycoside Hydrolase Family 50

Mechanism Retaining (inferred) e
ClanGH-A
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseGlu (inferred)
Catalytic Proton DonorGlu (inferred)
External resourcesCAZypedia;
Statistics GenBank accession (2173); Uniprot accession (23); PDB accession (7); 3D entries (4); cryst (0)
Bacteria
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 β-agarase (AgWH50C) (neoagarobiose-producing) 3.2.1.81 Agarivorans gilvus WH0801 AHM94172.1 A0A023LLI1
5Z6P[A,B] 2.06
 BACPLE_01683 (BpGH50)   Phocaeicola plebeius DSM 17135 EDY95417.1
WP_007560940.1
 
5T3B[A,B] 1.40
 EU509_06755   Pseudoalteromonas fuliginea PS47 KAA1159961.1  
6XJ9[A,B] 2.00
 exo-β-agarase D (AgaD; Sde_2644; SdCBM; SdCBMx) (neoagarobiose-producing) (Aga50D) 3.2.1.81 Saccharophagus degradans 2-40 ABD81904.1 Q21HC5
4BQ2[A,B,C,D] 1.90
4BQ3[A,B,C,D] unknown-(1-3)-β-D-Galp
2.10
4BQ4[A,B] α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp-(1-4)-α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp-(1-4)-α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp
unknown-(1-3)-β-D-Galp-(1-4)-β-D-Arap3Me-(1-3)-β-D-Galp
2.05
4BQ5[A,B] α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp-(1-4)-α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp-(1-4)-α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp-(1-4)-α-L-3,6-anhydro-Galp-(1-3)-β-D-Galp
2.30
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