Glycoside Hydrolase Family 123 / Subf 2

Mechanism Retaining e
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/Basecarbonyl oxygen of C-2 acetamido group of substrate
Catalytic Proton DonorGlu
NoteCreated after (Sumida et al., 2011) [PMID: 21297160]. Subfamilies established according to both (Moreno Prieto et al., 2024) [PMID:38129294] and (Sumida et al., 2024) [PMID:38730244]. In the latter, group 1 is GH123_4; group 2 is GH123_5; group 3 is GH123_3; group 4 is GH123_2 and group GH123 is GH123_1.
External resourcesCAZypedia;
Statistics GenBank accession (480); Uniprot accession (5); PDB accession (5); 3D entries (3); cryst (0)
Bacteria
Protein Name EC# OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
Subf
 exo-β-N-acetylgalactosaminidase (NgaLy) 3.2.1.-
3.2.1.-
Lacticaseibacillus yichunensis WP_125696777.1 A0AAT8XUB5
8K2N[A,B,C,D] 2.50
2
 β-N-acetylgalactosaminidase (NaNga) (DUF4091 domain-containing protein) 3.2.1.53 Niabella aurantiaca DSM 17617 WP_018628640.1 A0AAJ6N6J1
A0AAT8XUD7
8P4L[A,B,C,D,E,F,G,H,I,J, 2.79
8Q8H[A,B,C,D] 2.50
2
 exo-β-N-acetylgalactosaminidase (NgaP2) 3.2.1.-
3.2.1.-
Paenibacillus sp. TS12 BEL01682.1 A0AAT8XUB3
8K2L[A] 1.95
8K2M[A] D-1,2-deoxy-Galp
1.65
2
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