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Polysaccharide Lyase Family 1

Activities in FamilyPoly α-D-N-acetylgalactosaminuric acid lyase (EC 4.2.2.-);
Pectin lyase (EC 4.2.2.10);
Pectate lyase (EC 4.2.2.2);
Exo-polygalacturonate lyase (EC 4.2.2.9);
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia; HOMSTRAD;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (14332); Uniprot accession (107); PDB accession (47); 3D entries (17); cryst (1)
Summary
Download PL1 (14075) Taxonomic display Structure (17 - 1 cryst) Characterized (100)
| 1 | ... | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | ... | 90 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 Dvina_38710   Dactylosporangium vinaceum NRRL B-16297 UAB94077.1     5
 Dvina_33205   Dactylosporangium vinaceum NRRL B-16297 UAB93134.1    
 Dvina_26670   Dactylosporangium vinaceum NRRL B-16297 UAC01304.1     6
 DESUT3_28780   Desulfuromonas versatilis T3 BCR05809.1    
 DESUT3_28720   Desulfuromonas versatilis T3 BCR05803.1    
 DESUT3_28770   Desulfuromonas versatilis T3 BCR05808.1    
 G7047_20745 (fragment)   Diaphorobacter sp. HDW4A QIL84011.1     5
 DAQ1742_04112 (PelB)   Dickeya aquatica 174/2 SLM64879.1     3
 DAQ1742_04114 (PelZ)   Dickeya aquatica 174/2 SLM64881.1     2
 DAQ1742_04113 (PelC)   Dickeya aquatica 174/2 SLM64880.1     3
 DAQ1742_01076 (PelD)   Dickeya aquatica 174/2 SLM62099.1     6
 DAQ1742_01077 (PelA)   Dickeya aquatica 174/2 SLM62100.1     6
 pectate lyase D (PelD)   Dickeya chrysanthemi B374 CAA35176.1
CAW40922.1
CAW46080.1
CAW49284.1
CAW50991.1
CAW61549.1
CAW62452.1
CAW70715.1
CAW71340.1
CAW73820.1
CAW79797.1
CAW89321.1
CAW91256.1
CAW91914.1
CAW96012.1
CAW96233.1
CAW97079.1
CAX02156.1
CAX06726.1
CAX07080.1
CAX07583.1
CBC11582.1
CBC98484.1		     6
 pectate lyase E (PelE)   Dickeya chrysanthemi B374 CAA35175.1
CAW40924.1
CAW46082.1
CAW49286.1
CAW50993.1
CAW61551.1
CAW62454.1
CAW70717.1
CAW71342.1
CAW73822.1
CAW79799.1
CAW89327.1
CAW91260.1
CAW91918.1
CAW96014.1
CAW96235.1
CAW97081.1
CAX02158.1
CAX06728.1
CAX07082.1
CAX07585.1
CBC11584.1
CBC98488.1		     6
 QUF31_14285   Dickeya chrysanthemi BRR1 WJM87617.1     2
 QUF31_13305   Dickeya chrysanthemi BRR1 WJM84141.1     4
 QUF31_11915   Dickeya chrysanthemi BRR1 WJM83893.1     6
 QUF31_11905   Dickeya chrysanthemi BRR1 WJM87581.1     6
 QUF31_14275   Dickeya chrysanthemi BRR1 WJM84313.1     3
 QUF31_11910   Dickeya chrysanthemi BRR1 WJM83892.1     6
 QUF31_14280   Dickeya chrysanthemi BRR1 WJM84314.1     3
 pectate lyase (PelA) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24843.1
CAW40921.1
CAW46079.1
CAW49283.1
CAW50990.1
CAW61547.1
CAW62451.1
CAW70713.1
CAW71339.1
CAW73819.1
CAW79796.1
CAW89319.1
CAW91254.1
CAW91911.1
CAW96011.1
CAW96232.1
CAW97078.1
CAX02155.1
CAX06725.1
CAX07079.1
CAX07582.1
CBC11581.1
CBC98482.1		 P0C1A2
P29155		 1JRG[A,B]
1JTA[A]
1OOC[A,B]
1PE9[A,B] 		6
 pectate lyase (PelB;PlB) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24847.1 P04959   3
 pectate lyase (PelC) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24849.1
AAR45490.1
AAW11900.1		 P11073 1AIR[A]
1O88[A]
1O8D[A]
1O8E[A]
1O8F[A]
1O8G[A]
1O8H[A]
1O8I[A]
1O8J[A]
1O8K[A]
1O8L[A]
1O8M[A]
1PLU[A]
2EWE[A]
2PEC[A] 		3
 pectate lyase (PelE) 4.2.2.2 Dickeya chrysanthemi EC16 AAA24844.1
CAW40923.1
CAW46081.1
CAW49285.1
CAW50992.1
CAW61550.1
CAW62453.1
CAW70716.1
CAW71341.1
CAW73821.1
CAW79798.1
CAW89324.1
CAW91258.1
CAW91916.1
CAW96013.1
CAW96234.1
CAW97080.1
CAX02157.1
CAX06727.1
CAX07081.1
CAX07584.1
CBC11583.1
CBC98486.1		 P04960 1PCL[A] 6
 Dd1591_0270   Dickeya chrysanthemi Ech1591 ACT05162.1     3
 Dd1591_1089   Dickeya chrysanthemi Ech1591 ACT05961.1     6
 Dd1591_0271   Dickeya chrysanthemi Ech1591 ACT05163.1     3
 Dd1591_0269   Dickeya chrysanthemi Ech1591 ACT05161.1     2
 Dd1591_1091   Dickeya chrysanthemi Ech1591 ACT05963.1     6
 Dd1591_1090   Dickeya chrysanthemi Ech1591 ACT05962.1     6
 Dd1591_3306 (possible fragment)   Dickeya chrysanthemi Ech1591 ACT08124.1     8
 pectate lyase E (PelE)   Dickeya chrysanthemi S3-1 AKU19317.1     6
 pectate lyase Z (PelZ)   Dickeya chrysanthemi S3-1 AAX70924.1     2
 pectate lyase D (PelD;PLd;Dda3937_03372) 4.2.2.2 Dickeya dadantii 3937 ADM99552.1
CAA10570.1
CAW40891.1
CAW46049.1
CAW49253.1
CAW50960.1
CAW61511.1
CAW62421.1
CAW70677.1
CAW71309.1
CAW73789.1
CAW79766.1
CAW89250.1
CAW91190.1
CAW91860.1
CAW95981.1
CAW96202.1
CAW97048.1
CAX02125.1
CAX06695.1
CAX07049.1
CAX07552.1
CBC11551.1
CBC98428.1		 E0SAZ3
Q9Z4J4		   6
 pectate lyase Z (PelZ;Dda3937_04191) 4.2.2.2 Dickeya dadantii 3937 ADN00347.1
CAA65785.1		 E0SJQ8
P94773		   2
 pectate lyase C (PelC;PLc;Dda3937_04192) 4.2.2.2 Dickeya dadantii 3937 ADN00346.1
CAA10642.1
CAA47822.1		 E0SJQ7
Q59420
Q79AJ0		   3
 pectate lyase E (PelE;PLe;Dda3937_03371) 4.2.2.2 Dickeya dadantii 3937 ADM99551.1
AAA24854.1		 P0C1A5   6
 Dda3937_03551   Dickeya dadantii 3937 ADM96804.1     8
 Dda3937_04108 (PnlH) (possible fragment)   Dickeya dadantii 3937 ADM98893.1     8
 pectate lyase A (PelA; Dda3937_03370) 4.2.2.2 Dickeya dadantii 3937 ADM99550.1
AAA24846.1		 P0C1A3   6
 pectate lyase B (PelB;Dda3937_04193) 4.2.2.2 Dickeya dadantii 3937 ADN00345.1
CAA47821.1
S25262		 E0SJQ6
Q59419		   3
 pectate lyase (PelG32)   Dickeya dadantii DCE-01 UVY85794.1     6
 pectate lyase (Pel027)   Dickeya dadantii DCE-01 UVY85795.1     6
 KTF62_19835   Dickeya dadantii M2-3 UAY95997.1     3
 KTF62_19845   Dickeya dadantii M2-3 UAY95999.1     3
 KTF62_19850   Dickeya dadantii M2-3 UAY96000.1     2
 KTF62_02885   Dickeya dadantii M2-3 UAY96884.1     8
 KTF62_12955 (fragment)   Dickeya dadantii M2-3 UAY94766.1    
 KTF62_15920   Dickeya dadantii M2-3 UAY95309.1     6
 KTF62_15925   Dickeya dadantii M2-3 UAY95310.1     6
 KTF62_15915   Dickeya dadantii M2-3 UAY95308.1     6
 pectate lyase PelE, partial (fragment)   Dickeya dadantii MS594 QIJ31374.1     6
 KNV89_03740   Dickeya dadantii S3-1 QWT41653.1     6
 KNV89_07835   Dickeya dadantii S3-1 QWT42374.1     3
 KNV89_03745   Dickeya dadantii S3-1 QWT41654.1     6
 KNV89_07840   Dickeya dadantii S3-1 QWT42375.1     3
 KNV89_03750   Dickeya dadantii S3-1 QWT41655.1     6
 KNV89_07845   Dickeya dadantii S3-1 QWT42376.1     2
 KNV89_13200   Dickeya dadantii S3-1 QWT39349.1     8
 KNV89_02185   Dickeya dadantii S3-1 QWT41372.1     4
 JRZ92_02955   Dickeya dianthicola 16JP03 QVH80739.1     8
 JRZ92_15940 (fragment)   Dickeya dianthicola 16JP03 QVH82424.1     8
 JRZ92_16425   Dickeya dianthicola 16JP03 QVH79207.1     6
 JRZ92_20275   Dickeya dianthicola 16JP03 QVH79883.1     2
 JRZ92_16420   Dickeya dianthicola 16JP03 QVH79206.1     6
 JRZ92_20265   Dickeya dianthicola 16JP03 QVH79881.1     3
 JRZ92_20270   Dickeya dianthicola 16JP03 QVH79882.1     3
 JRZ84_15920 (fragment)   Dickeya dianthicola 16JP05 QVH78224.1     8
 JRZ84_02940   Dickeya dianthicola 16JP05 QVH76540.1     8
 JRZ84_20245   Dickeya dianthicola 16JP05 QVH75683.1     3
 JRZ84_16405   Dickeya dianthicola 16JP05 QVH75009.1     6
 JRZ84_20255   Dickeya dianthicola 16JP05 QVH75685.1     2
 JRZ84_16400   Dickeya dianthicola 16JP05 QVH75008.1     6
 JRZ84_20250   Dickeya dianthicola 16JP05 QVH75684.1     3
 JRZ91_20265   Dickeya dianthicola 16LI01 QVH71484.1     3
 JRZ91_02950   Dickeya dianthicola 16LI01 QVH72341.1     8
 JRZ91_20270   Dickeya dianthicola 16LI01 QVH71485.1     2
 JRZ91_20260   Dickeya dianthicola 16LI01 QVH71483.1     3
 JRZ91_16415   Dickeya dianthicola 16LI01 QVH70808.1     6
 JRZ91_16420   Dickeya dianthicola 16LI01 QVH70809.1     6
 JRZ91_15935 (fragment)   Dickeya dianthicola 16LI01 QVH74026.1     8
 JRZ85_20255   Dickeya dianthicola 16LI02 QVH67287.1     2
 JRZ85_15920 (fragment)   Dickeya dianthicola 16LI02 QVH69826.1     8
 JRZ85_20250   Dickeya dianthicola 16LI02 QVH67286.1     3
 JRZ85_20245   Dickeya dianthicola 16LI02 QVH67285.1     3
 JRZ85_02940   Dickeya dianthicola 16LI02 QVH68142.1     8
 JRZ85_16405   Dickeya dianthicola 16LI02 QVH66611.1     6
 JRZ85_16400   Dickeya dianthicola 16LI02 QVH66610.1     6
 JRZ89_20250   Dickeya dianthicola 16LI04 QVH63088.1     3
 JRZ89_16400   Dickeya dianthicola 16LI04 QVH62412.1     6
 JRZ89_16405   Dickeya dianthicola 16LI04 QVH62413.1     6
 JRZ89_02940   Dickeya dianthicola 16LI04 QVH63944.1     8
 JRZ89_15920 (fragment)   Dickeya dianthicola 16LI04 QVH65628.1     8
 JRZ89_20245   Dickeya dianthicola 16LI04 QVH63087.1     3
 JRZ89_20255   Dickeya dianthicola 16LI04 QVH63089.1     2
 JRZ90_16420   Dickeya dianthicola 16MA15T QVH58213.1     6
 JRZ90_15935 (fragment)   Dickeya dianthicola 16MA15T QVH61430.1     8
 JRZ90_16415   Dickeya dianthicola 16MA15T QVH58212.1     6
 JRZ90_20260   Dickeya dianthicola 16MA15T QVH58887.1     3
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