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Polysaccharide Lyase Family 1

Activities in FamilyPoly α-D-N-acetylgalactosaminuric acid lyase (EC 4.2.2.-);
Pectin lyase (EC 4.2.2.10);
Pectate lyase (EC 4.2.2.2);
Exo-polygalacturonate lyase (EC 4.2.2.9);
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia; HOMSTRAD;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (14332); Uniprot accession (107); PDB accession (47); 3D entries (17); cryst (1)
Summary
Download PL1 (14075) Taxonomic display Structure (17 - 1 cryst) Characterized (100)
| 1 | ... | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 |
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 unknown (ZM_BFb0028E15)   Zea mays B73 ACF86672.1
ACN35280.1		     1
 unknown (ZM_BFb0224B12)   Zea mays B73 ACF87417.1
CAW50905.1
CAW71254.1
CAW73734.1
CAW74442.1
CAW77317.1
CAW79711.1
CAW81601.1
CAW89117.1
CAW91067.1
CAW91765.1
CAW95926.1
CAW96147.1
CAW96993.1
CAX02070.1
CAX06640.1
CAX06994.1
CAX07497.1
CBC11496.1
CBD33354.1		     1
 ORF (fragment)   Zea mays subsp. mays ACN96319.1
ACN96320.1
ACN96322.1		     1
 ORF (fragment)   Zea mays subsp. mexicana ACN96353.1
ACN96354.1
ACN96355.1
ACN96356.1
ACN96358.1
ACN96359.1
ACN96360.1
ACN96362.1
ACN96364.1		     1
 ORF (fragment)   Zea mays subsp. parviglumis ACN96366.1
ACN96368.1
ACN96369.1
ACN96371.1
ACN96372.1
ACN96375.1
ACN96379.1		     1
 pectate lyase (ZePel) 4.2.2.2 Zinnia elegans CAA70735.1
CAC05181.1
CAV27756.1
CAW40680.1
CAW40927.1
CAW46085.1
CAW49289.1
CAW50996.1
CAW61390.1
CAW61558.1
CAW62457.1
CAW70724.1
CAW71345.1
CAW73825.1
CAW74517.1
CAW77392.1
CAW79802.1
CAW81676.1
CAW89335.1
CAW91267.1
CAW91924.1
CAW96017.1
CAW96238.1
CAW97084.1
CAX02161.1
CAX06731.1
CAX07085.1
CAX07588.1
CBC11587.1
CBC98494.1		 O24554   1
 641751   Zopfia rhizophila CBS 207.26 (Zoprh1)       4
 659859   Zopfia rhizophila CBS 207.26 (Zoprh1)       2
 597537   Zopfia rhizophila CBS 207.26 (Zoprh1)       7
 760175   Zopfia rhizophila CBS 207.26 (Zoprh1)      
 583730   Zopfia rhizophila CBS 207.26 (Zoprh1)       2
 753883   Zopfia rhizophila CBS 207.26 (Zoprh1)       10
 772180   Zymoseptoria ardabiliae STIR04_1.1.1 (Zymar1)      
 775320   Zymoseptoria ardabiliae STIR04_1.1.1 (Zymar1)       10
 7890   Zymoseptoria brevis Zb18110 (Zymbr1)      
 5651   Zymoseptoria brevis Zb18110 (Zymbr1)       10
 804284   Zymoseptoria pseudotritici STIR04_2.2.1 (Zymps1)       10
 802753   Zymoseptoria pseudotritici STIR04_2.2.1 (Zymps1)       7
 ZT1A5_G6336   Zymoseptoria tritici ST99CH_1A5 SMY24894.1     10
 ZT1A5_G4525   Zymoseptoria tritici ST99CH_1A5 SMY23085.1    
 ZT1E4_G4612   Zymoseptoria tritici ST99CH_1E4 SMR49220.1    
 ZT1E4_G6426   Zymoseptoria tritici ST99CH_1E4 SMR53151.1     10
 ZT3D1_G6323   Zymoseptoria tritici ST99CH_3D1 SMR54814.1     10
 ZT3D1_G4492   Zymoseptoria tritici ST99CH_3D1 SMR50395.1    
 ZT3D7_G6403   Zymoseptoria tritici ST99CH_3D7 SMQ51250.1     10
 ZT3D7_G4550   Zymoseptoria tritici ST99CH_3D7 SMQ49399.1     7
unclassified
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 A27 (short fragment)   uncultured microorganism AFU91436.1    
 pectate lyase, partial (fragment)   uncultured microorganism AFU91431.1    
 pectate lyase, partial (fragment)   uncultured microorganism AFU91442.1    
 pectate lyase, partial (fragment)   uncultured microorganism AFU91444.1    
 pectate lyase, partial (fragment)   uncultured microorganism AFU91456.1    
 pectate lyase (fragment)   uncultured microorganism AFU91433.1    
 pectate lyase (fragment)   uncultured microorganism AFU91434.1    
 pectate lyase (fragment)   uncultured microorganism AFU91438.1    
 pectate lyase (fragment)   uncultured microorganism AFU91440.1    
 pectate lyase (fragment)   uncultured microorganism AFU91429.1    
 pectate lyase (fragment)   uncultured microorganism AFU91430.1    
 pectate lyase (fragment)   uncultured microorganism AFU91432.1    
 pectate lyase (fragment)   uncultured microorganism AFU91435.1    
 pectate lyase (fragment)   uncultured microorganism AFU91437.1    
 pectate lyase (fragment)   uncultured microorganism AFU91439.1    
 pectate lyase (fragment)   uncultured microorganism AFU91441.1    
 pectate lyase (fragment)   uncultured microorganism AFU91453.1    
 pectate lyase (fragment)   uncultured microorganism AFU91454.1    
 pectate lyase (fragment)   uncultured microorganism AFU91457.1    
 pectate lyase (fragment)   uncultured microorganism AFU91458.1    
 pectate lyase (fragment)   uncultured microorganism AFU91459.1    
 pectinase   uncultured organism ADD62022.1    
 ORF   uncultured prokaryote CRY95522.1     2
Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 MKD35_251   Aureococcus anophagefferens virus UOG94286.1    
 MKD35_305   Aureococcus anophagefferens virus UOG94340.1    
 MKD35_266   Aureococcus anophagefferens virus UOG94301.1    
 AaV_375   Aureococcus anophagefferens virus AII17138.1    
 AaV_003   Aureococcus anophagefferens virus AII17139.1    
 AaV_038   Aureococcus anophagefferens virus AII17140.1    
 pectate lyase   Bacteriophage sp. UOF79829.1     2
 Nekkels1_55   Cellulophaga phage Nekkels_1 QQO97058.1    
 Nekkels2_55   Cellulophaga phage Nekkels_2 QQO97151.1    
 Phi10:1_gp095   Cellulophaga phage phi10:1 AGO48435.1    
 Phi13:1_gp024   Cellulophaga phage phi13:1 AGO49035.1    
 Phi13:2_gp087   Cellulophaga phage phi13:2 AGO49697.1    
 Phi19:2_gp030   Cellulophaga phage phi19:2 AGO48665.1    
 Phi38:2_gp09   Cellulophaga phage phi38:2 AGO49248.1    
 Phi39:1_gp26   Cellulophaga phage phi39:1 AGO49141.1    
 Phi3:1_gp9   Cellulophaga phage phi3:1 AGO49328.1    
 Phi3ST:2_gp9   Cellulophaga phage phi3ST:2 AGO47740.1    
 CDPG_00057   Cellulophaga phage phi47:1 AGF91661.1
AGO49746.1		    
 CEPG_00008   Cellulophaga phage phiSM AGH07756.1    
 PhiSM_gp09   Cellulophaga phage phiSM AGO48204.1    
 CGPG_00077   Cellulophaga phage phiST AGH56775.1
AGO47169.1		    
 HQ81_0209 (fragment)   Dickeya phage phiDP23.1 AIM51732.1     3
 pectate lyase   Podoviridae sp. UOF81308.1     2
 pectate lyase   Podoviridae sp. UOF79637.1     2
 pectate lyase   Podoviridae sp. UOF78749.1     2
 pectate lyase (fragment)   uncultured Mediterranean phage uvDeep-CGR2-KM19-C37 ANS03333.1    
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