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Polysaccharide Lyase Family 17

Activities in FamilyAlginate lyase (EC 4.2.2.-);
Oligomannuronate lyase / exo-acting mannuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Hyaluronate lyase (EC 4.2.2.1);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteThe alginate lyase function has been shown for several members of the family
External resourcesCAZypedia;
Statistics GenBank accession (1210); Uniprot accession (16); PDB accession (7); 3D entries (3); cryst (0)
Summary
Download PL17 (1192) Taxonomic display Structure (3) Characterized (29)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 D3Z09_10765   Rahnella aquatilis ZF7 AYA06987.1     2
 I2123_12390   Rahnella inusitata QUT13535.1     2
 Rahaq_2074   Rahnella sp. Y9602 ADW73685.1     2
 J9880_19105   Rahnella victoriana JZ-GX1 UHM90383.1     2
 SH586_19840   Raoultella planticola 208355 WPJ16412.1     1
 MNO12_24525   Raoultella planticola A2-F21 UNK74612.1     1
 CRT62_09570   Raoultella planticola FDAARGOS_429 ATM04854.1     1
 CRN15_25280   Raoultella planticola FDAARGOS_430 ATM17939.1     1
 MC50_024995   Raoultella planticola FDAARGOS_64 AUU06868.1     1
 G9395_010365   Raoultella planticola HH15 QRY01856.1     1
 KGP19_09980   Raoultella planticola JBIWA001 UAN12532.1     1
 O4J57_10020   Raoultella planticola RP_3045 WFO57901.1     1
 F3X94_11255   Raoultella planticola S25 QEU41849.1     1
 K6028_09870   Raoultella planticola SCLZS62 QZS66101.1     1
 NCTC13098_02792 (fragment)   Raoultella terrigena NCTC13098 VDR26442.1     1
 NCTC13098_02791 (fragment)   Raoultella terrigena NCTC13098 VDR26441.1    
 IMO34_09565   Raoultella terrigena Res13-Abat-PEB01-P1-04-A QPF10595.1     1
 V6622_10000   Raoultella terrigena RT01-5M1 WWP16393.1     1
 N6H18_03930 (fragment)   Reichenbachiella agarivorans BKB1-1 UXP33101.1     2
 N7E81_12945   Reichenbachiella carrageenanivorans Wsw4-B4 UXX78265.1     2
 GQ464_011560   Rhodocaloribacter litoris ISCAR-4553 QXD14095.1     2
 AWN76_018385   Rhodothermaceae bacterium RA ARA94929.1     2
 RmaAA213_12300   Rhodothermus marinus AA2-13 BBM69384.1     2
 RmaAA338_12320   Rhodothermus marinus AA3-38 BBM72367.1     2
 Rmar_1166   Rhodothermus marinus DSM 4252 ACY48056.1     2
 exo-alginate lyase (AlyRM4) 4.2.2.26
4.2.2.26		 Rhodothermus marinus MAT378 UVF39826.1     2
 K4G66_19425   Tunicatimonas sp. TK19036 WKN34549.1     2
 DCC35_17600 (fragment)   Roseivirga pacifica 9dcg1 QCK16416.1     2
 DCC35_17595 (fragment)   Roseivirga pacifica 9dcg1 QCK16415.1     2
 K0V07_09285   Ruficoccus sp. ZRK36 QYY34501.1    
 C2869_02775   Saccharobesus litoralis CCB-QB4 AWB65425.1     2
 oligomannuronate lyase / oligoalginate lyase (Sde_3284) (Alg17C) 4.2.2.- Saccharophagus degradans 2-40 ABD82539.1
ACK10580.1		 Q21FJ0 4NEI[A,B]
4OJZ[A,B]
4OK2[A,B]
4OK4[A,B] 		2
 QFX18_04260   Saccharophagus degradans FZY0027 WGO99275.1     2
 D0Y50_18865   Salinimonas sediminis N102 AXR08599.1     2
 HPG82_10450 (fragment)   Salmonella enterica 2012K-0845 QJY58168.1     1
 HPG92_22205 (fragment)   Salmonella enterica 94-0093 QJY64694.1     1
 NCTC10047_00007 (fragment)   Salmonella enterica subsp. arizonae NCTC10047 VEA74231.1     1
 NCTC10047_00006 (fragment)   Salmonella enterica subsp. arizonae NCTC10047 VEA74230.1     1
 EHF41_00030   Salmonella enterica subsp. diarizonae 16-SA00356 QAY22098.1     1
 NCTC10381_00006   Salmonella enterica subsp. diarizonae NCTC10381 SQI54996.1     1
 LFZ53_00030   Salmonella enterica subsp. diarizonae serovar 50:k:z str. MZ0080 ASG73710.1     1
 HTZ89_00030   Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) 14-SA00836-0 QKN94363.1     1
 LFZ55_00030   Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 ASG81467.1     1
 NCTC7318_00006 (fragment)   Salmonella enterica subsp. houtenae NCTC7318 VEA88976.1     1
 HFS24_00030 (fragment)   Salmonella enterica subsp. houtenae serovar 43:z4 CVM 24399 QQI31084.1     1
 NCTC10401_00005   Salmonella enterica subsp. houtenae serovar Houten NCTC10401 SQI68507.1     1
 GH768_07060 (fragment)   Salmonella enterica subsp. houtenae str. CFSAN000552 QGF84517.1     1
 HPG81_19220 (fragment)   Salmonella enterica subsp. VII serovar 1,40:g,z51:-- 2439-64 QJY68449.1     1
 FO447_10055   Segatella copri YF2 QNT66845.1     2
 N1F78_02785   Seonamhaeicola sp. MEBiC1930 WXT98241.1     2
 WN53_18750   Serratia fonticola DSM 4576 AKG70997.1     1
 FD644_11500   Serratia fonticola MS5 QCR60950.1     1
 D9980_04505 (fragment)   Serratia sp. 3ACOL1 AYM89902.1    
 KGP17_10265 (fragment)   Serratia sp. JSRIV001 UAN47872.1     1
 Sfri_3104   Shewanella frigidimarina NCIMB 400 ABI72941.1     2
 K8B83_13150   Shewanella inventionis D1489 UAL41841.1     2
 K8B83_19175   Shewanella inventionis D1489 UAL42913.1     2
 K8B83_13145   Shewanella inventionis D1489 UAL41840.1     2
 SJ2017_1079   Shewanella japonica KCTC 22435 ARD21410.1     2
 EGC82_17620   Shewanella livingstonensis LMG 19866 AZG74411.1     2
 EXU30_09955   Shewanella maritima D4-2 QBF82979.1     2
 EXU30_09960   Shewanella maritima D4-2 QBF82980.1     2
 FH971_04070   Shewanella polaris SM1901 QDE33158.1     2
 GUY17_16455   Shewanella sp. Arc9-LZ QHS14590.1     2
 oligoalginate lyase (OalS17) 4.2.2.26
4.2.2.26		 Shewanella sp. Kz7 AHW45238.1 A0A088CA41   2
 FLM48_05750   Shewanella sp. Scap07 QLE87727.1     2
 AW14_12520   Siansivirga zeaxanthinifaciens CC-SAMT-1 AJR04353.1     2
 M5M_10445   Simiduia agarivorans SA1 = DSM 21679 AFU99270.1
AFU99270.2		     2
 NF699_03010   Sphingomonadaceae bacterium OTU29LAMAA1 USU05686.1     2
 H5J25_12810   Sphingomonas aliaeris DH-S5 QQV76360.1     2
 H3Z74_06340   Sphingomonas alpina S8-3T QNQ10803.1     2
 G4G27_16395   Sphingomonas alpina So64.6b QNA85399.1     2
 LZK98_13080   Sphingomonas cannabina DM2-R-LB4 UIJ44012.1     2
 M9980_09000   Sphingomonas donggukensis RMG20 URW74713.1     2
 CVN68_20060   Sphingomonas psychrotolerans Cra20 ATY33966.1     2
 PIB19_20570   Sphingomonas sp. 7/4-4 WBY07662.1     2
 BRX40_02300   Sphingomonas sp. ABOJV APR51413.1     2
 LRS08_10770   Sphingomonas sp. J315 UUX98103.1     2
 SH591_14945   Sphingomonas sp. LY54 WRP28377.1     2
 oligoalginate lyase (AlgL) 4.2.2.26
4.2.2.26		 Sphingomonas sp. MJ-3 AEM45874.1
AEL31264.1		 G0ZNC1
G1EH67		   2
 O3305_18125   Sphingomonas sp. NIBR02145 NIBR 02145 WHU02085.1     2
 LZ586_16055   Sphingomonas sp. S2-65 UYY58156.1     2
 FPZ54_03250   Sphingomonas suaedae XS-10 QDX25135.1     2
 SKP52_04175   Sphingopyxis fribergensis Kp5.2 AJA07763.1     2
 LH20_00370   Sphingopyxis sp. 113P3 ALC10404.1     2
 SPYCA_1413   Sphingopyxis sp. FD7 BBB12155.1     2
 E5675_06715   Sphingopyxis sp. PAMC25046 QCB54153.1     2
 BWQ93_09895   Sphingopyxis sp. QXT-31 APZ98772.1     2
 KEC45_02420   Sphingopyxis sp. USTB-05 USI77772.1     2
 EAO27_20035   Sphingopyxis sp. YF1 UNU44737.1     2
 AOA14_11265   Sphingopyxis terrae subsp. terrae NBRC 15098 203-1 AMU95184.1     2
 HBA51_04100   Sphingopyxis terrae subsp. terrae YC-JH3 QXF11428.1     2
 LPB140_00300   Sphingorhabdus lutea LPB0140 APG61542.1     2
 SAMN06298216_2022   Spirosomataceae bacterium TFI 002 SOE21563.1     2
 RKE57_11200   Stenotrophomonas geniculata BR23 WNF08656.1     2
 WAC51_10675   Stenotrophomonas geniculata WXY53 WWY76922.1     2
 KX724_16005   Stenotrophomonas indicatrix D763 QXQ01617.1     2
 QIF44_08375   Stenotrophomonas indicatrix MGMM10 WGV56326.1     2
 DP16_2515   Stenotrophomonas maltophilia 13637 AIL07805.1     2
 LQ332_20215   Stenotrophomonas maltophilia 2013-SM12 UGB17433.1     2
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