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Polysaccharide Lyase Family 17

Activities in FamilyAlginate lyase (EC 4.2.2.-);
Oligomannuronate lyase / exo-acting mannuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Hyaluronate lyase (EC 4.2.2.1);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteThe alginate lyase function has been shown for several members of the family
External resourcesCAZypedia;
Statistics GenBank accession (1210); Uniprot accession (16); PDB accession (7); 3D entries (3); cryst (0)
Summary
Download PL17 (1192) Taxonomic display Structure (3) Characterized (29)
| 1 | ... | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | ... | 12 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 SK3146_02649 (fragment)   Paenibacillus konkukensis SK3146 UQZ83462.1    
 SK3146_01877   Paenibacillus konkukensis SK3146 UQZ82718.1    
 BBD42_24805   Paenibacillus sp. BIHB 4019 BIHB4019 ANY69345.1     1
 N6H14_14945 (fragment)   Paenibacillus sp. CC-CFT747 WJH36878.1    
 DVH26_27110   Paenibacillus sp. H1-7 ULL17806.1    
 LOZ80_24380   Paenibacillus sp. HWE-109 UKS24731.1     1
 H7F31_20910 (fragment)   Paenibacillus sp. PAMC21692 QNK55080.1    
 L1F29_13655   Paenibacillus spongiae PHS-Z3 UVI32805.1    
 IRI77_08260   Paludibaculum fermentans P105 QOY89935.1    
 DAPPPG734_18875 (fragment)   Pantoea agglomerans DAPP-PG734 CAH6336757.1     2
 DAPPPG734_18830   Pantoea agglomerans DAPP-PG734 CAH6336504.1     2
 D3H65_19220   Paraflavitalea soli 5GH32-13 AXY75981.1     2
 FX988_03261   Paraglaciecola mesophila GPM4 QHJ13003.1     2
 HFP51_00430   Parasphingopyxis sp. CP4 QLC20782.1     2
 CHN51_02465   Parasphingorhabdus flavimaris YGSMI21 ATW02511.1     2
 HF685_13560   Parasphingorhabdus halotolerans sp. JK6 QJB70188.1     2
 PFX98_14050   Paucibacter sp. S2-9 WIT10058.1    
 FYC62_00980   Pedobacter aquae CJ43 QEK50400.1     2
 AY601_1649   Pedobacter cryoconitis PAMC 27485 AMP98564.1     2
 QG516_25180   Pedobacter gandavensis WB7 WGQ09810.1     2
 AQ505_11715   Pedobacter sp. PACM 27299 ALL06098.1     2
 OVA16_18565   Pedobacter sp. SL55 WAC40544.1     2
 BFS30_00305   Pedobacter steynii DX4 AOM75747.1     2
 AM2010_1736   Pelagerythrobacter marensis KCTC 22370 AKM07802.1    
 NCF86_09620   Pelagerythrobacter marinus E6 USA38585.1    
 T8T98_02425   Pelagerythrobacter marinus OXR-96 WPZ07389.1    
 PEPS_32150   Persicobacter psychrovividus NBRC 101262 BDD00935.1     2
 PEPS_32240   Persicobacter psychrovividus NBRC 101262 BDD00944.1     2
 H744_1c1645   Photobacterium gaetbulicola Gung47 AJR06663.1     2
 H744_1c1644   Photobacterium gaetbulicola Gung47 AJR06662.1     2
 H744_1c1620   Photobacterium gaetbulicola Gung47 AJR06638.1     1
 PTW35_27075   Photobacterium sp. DA100 WEM44914.1     2
 PTW35_27080   Photobacterium sp. DA100 WEM44915.1     2
 PTW35_17785   Photobacterium sp. DA100 WEM44956.1     1
 MACH26_09680   Planctobacterium marinum Dej080120_11 BDX05447.1     2
 HED60_05290   Planctomycetales bacterium zrk34 QNN21705.1    
 H9I45_00595   Polaribacter haliotis KCTC 52418 QOD60969.1     2
 H9W90_14125   Polaribacter pectinis L12M9 QNM85307.1     2
 BW723_07355   Polaribacter reichenbachii 6Alg 8T APZ46125.1     2
 BTO17_15375   Polaribacter reichenbachii KCTC 23969 AUC19987.1     2
 BTO15_08240   Polaribacter sejongensis KCTC 23670 AUC22086.1     2
 H0I28_10635   Polaribacter sp. AHE13PA QXP65672.1     2
 BXQ17_10045   Polaribacter sp. BM10 AQS94382.1     2
 H0I27_15090   Polaribacter sp. HaHaR_3_91 QXP63161.1     2
 SAMN05216503_1873   Polaribacter sp. KT25b SDS06699.1     2
 MED152_09820   Polaribacter sp. MED152 EAQ43012.1     2
 JOP69_14900   Polaribacter sp. Q13 QVY65022.1     2
 H0I29_03615   Polaribacter sp. R2A056_3_33 QXP71193.1     2
 BTO07_14680   Polaribacter sp. SA4-12 ARV16311.1     2
 NQP51_08945   Polaribacter undariae KCTC 42175 UWD33784.1     2
 LPB03_09610   Polaribacter vadi LPB0003 AOW17699.1     2
 RJD25_08340   Pontibacter sp. G13 WNJ20476.1     2
 PSM36_2063   Proteiniphilum saccharofermentans SCD20870.1    
 APS56_15085   Pseudalgibacter alginicilyticus HZ22 ALJ06378.1     2
 LC071_01285   Pseudalkalibacillus hwajinpoensis KcN21-2 WLR60058.1    
 LC071_01340   Pseudalkalibacillus hwajinpoensis KcN21-2 WLR60067.1    
 PAGA_a1383   Pseudoalteromonas agarivorans DSM 14585 ATC81801.1     2
 D9T18_10380   Pseudoalteromonas agarivorans Hao 2018 AYM88217.1     2
 PARC_a2609   Pseudoalteromonas arctica A 37-1-2 ATC87079.1     2
 oligoalginate lyase (AlyM3; JFJ09_15375) 4.2.2.26
4.2.2.26		 Pseudoalteromonas arctica M9 MBZ2193586.1     2
 oligomannuronate lyase / exo-mannuronate lyase (Patl_3651) 4.2.2.- Pseudoalteromonas atlantica T6c ABG42153.1     2
 alginate lyase (Aly23) 4.2.2.- Pseudoalteromonas carrageenovora ASY5 QWT68652.1     2
 PCAR9_A20871 (Alg17C)   Pseudoalteromonas carrageenovora IAM 12662 ATCC 43555 SOU40430.1     2
 PC2016_1119   Pseudoalteromonas carrageenovora KCTC 22325 QBJ71346.1     2
 FFU37_09495   Pseudoalteromonas distincta 16-SW-7 QCU74683.1     2
 PESP_a2549   Pseudoalteromonas espejiana DSM 9414 ATCC 29659 ASM50504.1     2
 PI2015_1887   Pseudoalteromonas issachenkonii KCTC 12958 ALQ55172.1     2
 PISS_a2171   Pseudoalteromonas issachenkonii KMM 3549 ATC91014.1     2
 CPA52_10500   Pseudoalteromonas marina ECSMB14103 ATG58648.1     2
 ATS72_001495   Pseudoalteromonas sp. 13-15 AUL72346.1     2
 AOR04_06095   Pseudoalteromonas sp. 1_2015MBL_MicDiv ATG77134.1     2
 MTP24_05575   Pseudoalteromonas sp. APM04 UOB74582.1     2
 D172_011660   Pseudoalteromonas sp. Bsw20308 ALQ08666.1     2
 ATS73_004235   Pseudoalteromonas sp. H100 WFO19955.1     2
 RB214_06505   Pseudoalteromonas sp. HL-AS1 WMS92028.1     2
 RB215_08545   Pseudoalteromonas sp. HL-AS2 WMS93350.1     2
 JG479_10455   Pseudoalteromonas sp. LC2018020214 QQM63176.1     2
 PspMM1_21180   Pseudoalteromonas sp. MM1 BED89650.1     2
 EJ103_10675   Pseudoalteromonas sp. Xi13 AZN34302.1     2
 PSHAa1748 (alylL)   Pseudoalteromonas translucida TAC125 CAI86820.1     2
 FSB84_21275   Pseudobacter ginsenosidimutans Gsoil 221 QEC44086.1     2
 G163CM_19890   Pseudocitrobacter corydidari isolate G163CM UGS41287.1     1
 alginate lyase (AlyII) 4.2.2.3 Pseudomonas sp. OS-ALG-9 BAA19848.1
ACK10579.1		 O05937   2
 oligomannuronate lyase / exo-acting mannuronan lyase (Pedsa_1196) 4.2.2.- Pseudopedobacter saltans DSM 12145 ADY51764.1     2
 LAJ50_05045   Pseudoxanthomonas sp. X-1 UAY75624.1     2
 WQ53_03470   Pseudoxanthomonas suwonensis J1 AKC88160.1     2
 MUN68_012555   Psychroserpens ponticola MSW6 WCO00894.1     2
 E9099_09530   Psychroserpens sp. NJDZ02 QCE41644.1     2
 LCM18_03180   Qipengyuania flava DP4Y115-4 UOR09550.1     2
 EKJ_07580   Qipengyuania flava KJ5 BBI19911.1     2
 N6L26_12935   Qipengyuania sp. SS22 UYH54926.1     2
 MNO10_05655   Rahnella aceris S2-A69 UNK54296.1     2
 JHW33_06460   Rahnella aceris ZF458 QQN36269.1     2
 Rahaq2_2212   Rahnella aquatilis CIP 78.65 = ATCC 33071 AEX52068.1     2
 FS594_11165   Rahnella aquatilis H145 UJD89300.1     2
 Q7S_10515   Rahnella aquatilis HX2 AFE58337.1     2
 EJP80_10565   Rahnella aquatilis KM05 AZP50924.1     2
 EJP81_10175   Rahnella aquatilis KM12 AZP46520.1     2
 EJP79_10170   Rahnella aquatilis KM25 AZP42180.1     2
 EYS10_25795   Rahnella aquatilis MEM40 QBJ11742.1     2
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