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Polysaccharide Lyase Family 17

Activities in FamilyAlginate lyase (EC 4.2.2.-);
Oligomannuronate lyase / exo-acting mannuronan lyase (EC 4.2.2.-);
Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-);
Hyaluronate lyase (EC 4.2.2.1);
Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11);
Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26);
Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteThe alginate lyase function has been shown for several members of the family
External resourcesCAZypedia;
Statistics GenBank accession (1188); Uniprot accession (16); PDB accession (7); 3D entries (3); cryst (0)
Summary
Download PL17 (1170) Taxonomic display Structure (3) Characterized (29)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D Subf
 H1A11_13110   Bacteroides sp. CACC 737 QMI79390.1    
 NQ505_05550   Bacteroides sp. D2 UWO00900.1     2
 H8796_04980   Bacteroides sp. M10 QNL39960.1     2
 Bun01g_02180   Bacteroides uniformis NBRC 113350 BBK85848.1    
 P2T61_10435   Bacteroides xylanisolvens AY11-1 WET88054.1     2
 NXW81_04745   Bacteroides xylanisolvens BFG-319 UVQ12026.1     2
 NXX95_04745   Bacteroides xylanisolvens BFG-514 UVP25207.1     2
 INE93_03756   Bacteroides xylanisolvens CL11T00C41 QUT26278.1     2
 U0030_00190   Brevundimonas bullata HAMBI_0262 WQE36928.1     2
 EQG53_08455   Brevundimonas diminuta ATCC(B) 19146 QAT14391.1     2
 CD943_13055   Brevundimonas diminuta BZC3 ASD27731.1     2
 I6H83_13980   Brevundimonas diminuta FDAARGOS_1026 QQB88233.1     2
 D8I30_01135   Brevundimonas naejangsanensis BRV3 AYG93945.1     2
 KWG63_11820   Brevundimonas nasdae A30 QYC12928.1     2
 KWG56_16500   Brevundimonas nasdae Au29 QYC10139.1     2
 FKQ52_14560   Brevundimonas sp. M20 QDH74534.1     2
 Bresu_2896   Brevundimonas subvibrioides ATCC 15264 ADL02203.1     2
 BADSM9389_16810   Buttiauxella agrestis DSM 9389 BCG09015.1     1
 MNO13_10435   Buttiauxella ferragutiae H4-C11 UNK63273.1     1
 D8682_05440   Buttiauxella sp. 3AFRM03 AYN26492.1     1
 RHD99_09470   Buttiauxella sp. R73 WMY76131.1     1
 OH773_08475   Buttiauxella sp. WJP83 WBM72256.1     1
 Q2T83_08610   Candidatus Fervidibacter sacchari PD1 WKU17861.1    
 hyaluronate lyase (Acid_4041) 4.2.2.1 Candidatus Solibacter usitatus Ellin6076 ABJ85006.1 Q01ZA9  
 Acid_7164   Candidatus Solibacter usitatus Ellin6076 ABJ88075.1    
 OLW01_17880   Catenovulum sp. TS8 WAJ72149.1     2
 C1707_09410   Caulobacter flavus RHGG3 AYV49508.1     2
 MZV50_25605   Caulobacter segnis RL271 USQ95873.1     2
 Celal_4221   Cellulophaga algicola DSM 14237 ADV51463.1     2
 M666_17460   Cellulophaga baltica 18 AIZ43185.1     2
 M667_17460   Cellulophaga baltica NN016038 AIY14813.1     2
 A5M85_01525   Cellulophaga lytica DAU203 APU09016.1     2
 Celly_0295   Cellulophaga lytica DSM 7489 ADY28130.1     2
 SR888_01910   Cellulophaga lytica DSMZ 7489 WQG77685.1     2
 QYR09_01465   Cellulophaga lytica EKP101 WKB81726.1     2
 IX49_01145   Cellulophaga lytica HI1 AIM59205.1     2
 PBN93_01460   Cellulophaga omnivescoria MSK1 WBU89702.1     2
 H0I23_04615   Cellulophaga sp. HaHaR_3_176 QWX84930.1     2
 H0I24_05545   Cellulophaga sp. HaHa_2_1 QXP53402.1     2
 oligoalginate lyase (Oalc17)   Cellulophaga sp. SY116 AXF38165.1     2
 B0D95_02120   Cellvibrio sp. PSBB023 AQT59019.1     2
 Z042_01960   Chania multitudinisentens RB-25 AHG18537.1     1
 Z042_21515   Chania multitudinisentens RB-25 AHG21899.1    
 Z042_21520   Chania multitudinisentens RB-25 AHG21900.1     2
 OQ292_34430   Chondrinema litorale WSW3-B12 UZR98949.1     2
 GFO_1151 (orf1138) (fragment)   Christiangramia forsetii KT0803 CAL66125.1     2
 orf1137 (fragment)   Christiangramia forsetii KT0803 CAL66124.1     2
 NBC122_01621   Chryseobacterium salivictor NBC 122 QBO58436.1     2
 QGN23_13830   Chryseobacterium sp. wdc7 WHF51488.1     2
 R1016_15985 (fragment)   Citrobacter koseri K1018 WOI93174.1     1
 R1015_20655 (fragment)   Citrobacter koseri K1118 WOJ21559.1     1
 R1019_15865 (fragment)   Citrobacter koseri K118 WOJ06264.1     1
 R0291_15935 (fragment)   Citrobacter koseri K1219 WOP81797.1     1
 R1157_16085 (fragment)   Citrobacter koseri K4022 WOJ01856.1     1
 R1018_15895 (fragment)   Citrobacter koseri K616 WOJ16425.1     1
 TUM13189_31760 (fragment)   Citrobacter koseri TUM13189 BDG85616.1     1
 TUM20903_31540 (fragment)   Citrobacter koseri TUM20903 BDG90416.1     1
 RY846_05695   Citrobacter portucalensis L2724hy WOH44676.1     1
 Closa_3333   [Clostridium] saccharolyticum WM1 ADL05862.1     1
 SAMN02745906_2996   [Clostridium] sphenoides JCM 1415 ATCC 19403 SET91754.1     1
 KDX00_17485   Cobetia litoralis MC13-5 UTV86846.1     2
 KDX00_17490   Cobetia litoralis MC13-5 UTV86847.1     2
 BFX80_07165   Cobetia marina JCM 21022 AOM01119.1    
 BFX80_07160   Cobetia marina JCM 21022 AOM01118.1     2
 alginate lyase (Alg2107; F8A90_10425) 4.2.2.- Cobetia sp. cqz5-12 QQK64493.1     2
 F8A90_10430 (Alg2108)   Cobetia sp. cqz5-12 QQK64494.1     2
 B5D82_13295   Cognaticolwellia beringensis NB097-1 ASP50014.1     2
 B5D82_13235   Cognaticolwellia beringensis NB097-1 ASP48646.1     2
 EKO29_05460   Colwellia sp. Arc7-635 AZQ83537.1     2
 DBO93_13910   Colwellia sp. Arc7-D AWB58543.1     2
 DBO93_13855   Colwellia sp. Arc7-D AWB59566.1     2
 FGD67_04935   Colwellia sp. M166 UUO22602.1     2
 A3Q33_13235   Colwellia sp. PAMC 21821 ARD46660.1     2
 R0135_10575   Congregibacter sp. IMCC43200 WOJ92231.1     2
 R0137_03645   Congregibacter sp. IMCC45268 WOJ97673.1     2
 Cfast33896_25740 (fragment)   Coprobacter fastidiosus JCM 33896 BEG63619.1    
 Cfast33896_25750 (fragment)   Coprobacter fastidiosus JCM 33896 BEG63620.1    
 Cfast33896_26460   Coprobacter fastidiosus JCM 33896 BEG63691.1    
 Cfast33896_08540   Coprobacter fastidiosus JCM 33896 BEG61899.1    
 SH580_05180   Coraliomargarita sp. J2-16 WPJ97098.1    
 CA2559_11508   Croceibacter atlanticus HTCC2559 EAP86660.1     2
 AB433_04690   Croceicoccus naphthovorans PQ-2 AKM09437.1     2
 I597_0903   Dokdonia donghaensis DSW-1 ANH59829.1     2
 Krodi_0315   Dokdonia sp. 4H-3-7-5 AEE18301.1     2
 DCS32_10570   Dokdonia sp. Dokd-P16 AWH74583.1     2
 MED134_10670   Dokdonia sp. MED134 EAQ38154.1     2
 DN752_00830 (fragment)   Echinicola strongylocentroti MEBiC08714 AWW28790.1     2
 HU826_24110   Enterobacter cancerogenus HAEC1 QZY39593.1     1
 Entcl_3096   [Enterobacter] lignolyticus SCF1 ADO49342.1     1
 LCD46_06080   Enterobacter ludwigii 11894-yvys UOY71884.1     1
 QEP13_15805 (fragment)   Enterobacter ludwigii CRE2104-31 WVX59341.1    
 QEP13_15810 (fragment)   Enterobacter ludwigii CRE2104-31 WVX62677.1    
 JY395_22515   Enterobacter mori 08-091 QWC69394.1     1
 PZO51_22420   Enterobacter mori LgD10 WKW40250.1     1
 F652_597   Enterobacteriaceae bacterium bta3-1 AJQ98587.1     1
 GE278_11145   Enterobacteriaceae bacterium Kacie_13 QLK61286.1     2
 KDC96_01610   Erythrobacter sp. JK5 QUL38147.1    
 FIU90_09070   Erythrobacter sp. THAF29 QFT77687.1    
 GXP68_10025   Ewingella americana B6-1 QMV51659.1     2
 KI613_09220   Ferribacterium limneticum 76 UCV24662.1    
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