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Enzyme Classes
Associated Modules
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Glycoside Hydrolases
GlycosylTransferases
Polysaccharide Lyases
Carbohydrate Esterases
Carbohydrate-Binding Modules
Foreword
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Bacteria
Eukaryota
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PL1
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PL14
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PL17
PL18
PL19
PL20
PL21
PL22
NC
Family
Tax_id
Organism name
Protein name
GenBank accession
Uniprot accession
PDB accession
EC number
Known activities
Mechanisms
Clan
Site
Polysaccharide Lyase Family 17
Known Activities
alginate lyase (EC
4.2.2.3
); oligoalginate lyase (EC
4.2.2.-
)
Statistics
GenBank accession (71); Uniprot accession (36);
Summary
All
(63)
Bacteria
(63)
Characterized
(2)
Subfamilies
(52)
Bacteria
Protein Name
EC#
Organism
GenBank
Uniprot
PDB/3D
Subf
ambt_05125
Alteromonas sp. SN2
AEF02573.1
2
Avin_46500
Azotobacter vinelandii DJ ATCC BAA-1303
ACO80755.1
C1DIT6
2
Bresu_2896
Brevundimonas subvibrioides ATCC 15264
ADL02203.1
D9QNG8
2
Celal_4221
Cellulophaga algicola DSM 14237
ADV51463.1
2
Celly_0295
Cellulophaga lytica DSM 7489
ADY28130.1
2
Cphy_0489 (fragment)
Clostridium phytofermentans ISDg
ABX40876.1
A9KI42
Closa_0105 (possible fragment)
Clostridium saccharolyticum WM1
ADL02748.1
D9R0U9
Closa_3333
Clostridium saccharolyticum WM1
ADL05862.1
D9R9B1
CA2559_11508
Croceibacter atlanticus HTCC2559
EAP86660.1
EAP86660.1
A3UA24
2
Entcl_3096
Enterobacter cloacae SCF1
ADO49342.1
E3G3T6
1
Glaag_3645
Glaciecola agarilytica 4H-3-7+YE-5
AEE24574.1
2
orf1137 + orf1138
Gramella forsetii KT0803
CAL66124.1
CAL66125.1
2
Hbal_2771
Hirschia baltica ATCC 49814 ATCC 59814
ACT60444.1
C6XQE5
2
Ilyop_2136
Ilyobacter polytropus DSM 2926
ADO83900.1
E3HC57
KOX_23615
Klebsiella oxytoca KCTC 1686 NRRL B-199
AEX06439.1
Kvar_1856
Klebsiella variicola At-22
ADC57757.1
D3R9L4
1
Krodi_0315
Krokinobacter diaphorus 4H-3-7-5
AEE18301.1
2
Lacal_1748
Lacinutrix sp. 5H-3-7-4
AEH01596.1
2
Mmar10_0256
Maricaulis maris MCS10
ABI64549.1
Q0AT38
2
Niako_5223
Niastella koreensis GR20-10
AEW01460.1
2
Oweho_2211
Owenweeksia hongkongensis DSM 17368
AEV33185.1
KNP414_01702
Paenibacillus mucilaginosus KNP414
AEI40264.1
GYMC10_3686
Paenibacillus sp. Y412MC10
ACX65921.1
D3EKY4
Pedsa_1196
Pedobacter saltans DSM 12145
ADY51764.1
2
Patl_3651
Pseudoalteromonas atlantica T6c
ABG42153.1
Q15PN5
2
PSHAa1748 (alylL)
Pseudoalteromonas haloplanktis TAC125
CAI86820.1
Q3IH55
2
alginate lyase (AlyII)
4.2.2.3
Pseudomonas sp. OS-ALG-9
ACK10579.1
BAA19848.1
O05937
2
Rahaq2_2212
Rahnella aquatilis CIP 78.65 = ATCC 33071
AEX52068.1
2
Rahaq_2074
Rahnella sp. Y9602
ADW73685.1
2
Rmar_1166
Rhodothermus marinus DSM 4252
ACY48056.1
D0MHU8
2
Sde_3284
(Alg17C)
Saccharophagus degradans 2-40
ABD82539.1
ACK10580.1
Q21FJ0
2
Sfri_3104
Shewanella frigidimarina NCIMB 400
ABI72941.1
Q07YH3
2
Acid_4041
Solibacter usitatus Ellin6076
ABJ85006.1
Q01ZA9
Acid_7164
Solibacter usitatus Ellin6076
ABJ88075.1
Q01QJ5
oligoalginate lyase (AlgL)
4.2.2.-
Sphingomonas sp. MJ3
AEL31264.1
AEM45874.1
2
Spith_1748
Spirochaeta thermophila DSM 6578
AEJ62008.1
Smlt2602
Stenotrophomonas maltophilia K279a
CAQ46078.1
B2FSW8
2
Smal_2067
Stenotrophomonas maltophilia R551-3
ACF51771.1
B4SJL6
2
alginate lyase I (AlyVMI)
Vibrio midae SY9
ADW41660.1
2
alginate lyase II (AlyVMII)
Vibrio midae SY9
ADW41661.1
2
VS_1246
Vibrio splendidus LGP32
CAV18382.1
B7VN35
2
VS_1247
Vibrio splendidus LGP32
CAV18383.1
B7VN36
2
YE0458
Yersinia enterocolitica subsp. enterocolitica 8081
CAL10581.1
A1JIZ0
1
YE105_C0474
Yersinia enterocolitica subsp. palearctica 105.5R(r)
ADZ40972.1
1
Y11_36820
Yersinia enterocolitica subsp. palearctica Y11
CBY28839.1
1
YEW_FJ23040
Yersinia enterocolitica W22703
CBX72172.1
1
A1122_08530
Yersinia pestis A1122
AEL72357.1
1
YpAngola_A4014
Yersinia pestis Angola
ABX85919.1
A9R5C4
1
YPA_2976
Yersinia pestis Antiqua
ABG14938.1
Q1C3N4
1
YPC_3813
Yersinia pestis biovar Medievalis str. Harbin 35
ADW00251.1
1
YP0609
Yersinia pestis biovar Microtus str. 91001
AAS60879.1
NP_992002.1
1
YPO3474
Yersinia pestis CO92 Biovar Orientalis
CAC92703.1
CAL22062.1
NP_406933.1
Q8ZBE2
1
YPD4_3057
Yersinia pestis D106004
ACY59961.1
D0JHH1
1
YPD8_3056
Yersinia pestis D182038
ACY63728.1
D0JRY8
1
Y0710 (possible fragment)
Yersinia pestis KIM
AAM84298.1
NP_668047.1
1
YPN_0613
Yersinia pestis Nepal516
ABG16945.1
Q1CM35
1
YPDSF_3284
Yersinia pestis Pestoides F
ABP41641.1
A4TQS9
1
YPZ3_3069
Yersinia pestis Z176003
ADE65978.1
D5B3I7
1
YpsIP31758_3577
Yersinia pseudotuberculosis IP 31758
ABS47198.1
A7FMQ3
1
YPTB0499
Yersinia pseudotuberculosis IP 32953
CAH19739.1
1
YPTS_0529
Yersinia pseudotuberculosis PB1/+
ACC87515.1
B2K2S4
1
YPK_3711
Yersinia pseudotuberculosis YPIII
ACA69978.1
B1JLW1
1
zobellia_2624 (Alya3)
Zobellia galactanivorans DsiJT
CAZ96774.1
2
Last update:
2012-01-31
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AFMB - CNRS - Universités Aix-Marseille I & II