Glycoside Hydrolase Family 38

Activities in FamilyMannosyl-1-phosphodiester α-1,P-mannosidase (EC 3.2.1.-);
Mannosyl-oligosaccharide α-1,3-mannosidase (EC 3.2.1.-);
Mannosyl-oligosaccharide α-1,2-mannosidase (EC 3.2.1.113);
Mannosyl-oligosaccharide α-1,3-1,6-mannosidase (EC 3.2.1.114);
Mannosyl-oligosaccharide α-1,6-mannosidase / exo-α-1,6-mannosidase (EC 3.2.1.163);
α-mannosidase (EC 3.2.1.24);
Mechanism Retaining a
3D Structure Statusmannosidase fold
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorNot known
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (11904); Uniprot accession (86); PDB accession (82); 3D entries (13); cryst (2)
Bacteria
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 mannosyl-oligosaccharide α-1,6-mannosidase (Bl_Man38A; BL1327) 3.2.1.114 Bifidobacterium longum NCC2705 AAN25127.1
NP_696491.1
 
7UFR[A,B,C,D] 2.70
7UFU[A,B,C,D] α-D-Manp
2.70
 mannosyl-oligosaccharide α-1,2-mannosidase (Bl_Man38B; BL1328) 3.2.1.113 Bifidobacterium longum NCC2705 AAN25128.1
NP_696492.1
 
7UFS[A,B,C,D] 3.40
 mannosyl-oligosaccharide exo-α-1,2-mannosidase (Bl_Man38C; BL1329) 3.2.1.113 Bifidobacterium longum NCC2705 AAN25129.1
NP_696493.1
 
7UFT[A,B,C,D] 2.90
 α-mannosidase (EF1707;EF_1707)   Enterococcus faecalis V583 AAO81483.1
AAR57537.1
NP_815413.1
 
3LVT[A] 2.55
5KBP[A,B] 2.40
 mannosyl-oligosaccharide α-1,3-mannosidase (SPy1604) 3.2.1.- Streptococcus pyogenes M1 GAS SF370 AAK34381.1
NP_269660.1
Q99YP5
2WYH[A,B] 1.90
2WYI[A,B] <carb_like_SWA>
2.60
 α-mannosidase (cytosolic) (TM1851;Tmari_1866) 3.2.1.24 Thermotoga maritima MSB8 AAD36913.1
AGL50790.1
AHD18252.1
AKE29607.1
NP_229647.1
Q9X2G6
R4NSK1
cryst    
Eukaryota
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 α-mannosidase (Man2B1;ManB) (lysosomal) 3.2.1.24 Bos taurus AAC48763.1
AAB67726.2
NP_776986.2
Q29451
1O7D[A,B,C,D,E] 2.70
 α-1,2/3/6-mannosidase (JBM;JBAM) (peptide sequencing) (partial) 3.2.1.113
3.2.1.114
3.2.1.24
Canavalia ensiformis   C0HJB3
6B9O[A,B] 1.84
6B9P[A,B] β-D-GlcpNAc-(1-4)-D-1-deoxy-GlcpNAc
2.00
 GlcNAcMan5GlcNAc2 α-1,6-mannosidase / GlcNAcMan4GlcNAc2 α-1,3-mannosidase / α-mannosidase II (GMII;α-Man-II;CG18474) 3.2.1.114 Drosophila melanogaster CAA54732.1
AAF54375.1
AAF54376.1
AAM50118.1
AGB95795.1
CAA10755.1
CAH33908.1
CBA12847.1
CBA34887.1
NP_524291.2
A0A0B4KFG0
Q24451
1HTY[A] 1.40
1HWW[A] <carb_like_SWA>
1.87
1HXK[A] <carb_like_DMJ>
1.50
1PS3[A] β-D-GlcpNAc
<carb_like_KIF>
1.80
1QWN[A] α-L-Gulp5F-(1-4)-ASP
1.20
1QWU[A] α-L-Gulp5F-(1-4)-ASP
2.03
1QX1[A] β-D-Manp2F-(1-4)-ASP
1.30
1R33[A] <carb_like_LKA>
1.80
1R34[A] <carb_like_LKS>
1.95
1TQS[A] <carb_like_SSO>
1.30
1TQT[A] <carb_like_SSD>
1.90
1TQU[A] <carb_like_GHA>
2.03
1TQV[A] <carb_like_SSE>
2.03
1TQW[A] 1.20
2ALW[A] <carb_like_MNM>
1.86
2F18[A] <carb_like_GB1>
1.30
2F1A[A] 1.45
2F1B[A] <carb_like_GB3>
1.45
2F7O[A] <carb_like_MSN>
1.43
2F7P[A] <carb_like_2SK>
1.28
2F7Q[A] <carb_like_AOL>
1.85
2F7R[A] <carb_like_SK3>
1.35
2FYV[A] <carb_like_W72>
1.90
2OW6[A] <carb_like_NK1>
1.19
2OW7[A] <carb_like_NK2>
1.77
3BLB[A] <carb_like_SWA>
1.30
3BUB[A] 1.38
3BUD[A] 1.85
3BUI[A] 1.25
3BUP[A] α-D-Manp
2.03
3BUQ[A] α-D-Manp
2.01
3BVT[A] α-D-Manp-(1-3)-α-D-Manp3S-(1-1)-methyl
1.30
3BVU[A] α-D-Manp-(1-6)[α-D-Manp-(1-3)]-α-D-Manp3S-(1-1)-methyl
1.12
3BVV[A] α-D-Manp6SH-(1-6)[α-D-Manp-(1-3)]-β-D-Manp-(1-1)-methyl
1.30
3BVW[A] α-D-Manp-(1-6)-α-D-Manp6SH-(1-6)[β-D-GlcpNAc-(1-2)-α-D-Manp-(1-3)]-β-D-Manp-(1-1)-methyl
1.20
3BVX[A] α-D-Manp-(1-6)-α-D-Manp-(1-6)[β-D-GlcpNAc-(1-2)-α-D-Manp-(1-3)]-β-D-Manp-(1-1)-methyl
1.10
3CV5[A] α-D-Manp-(1-6)[α-D-Manp-(1-3)]-α-D-Manp-(1-6)[α-D-Manp-(1-3)]-β-D-Manp
1.60
3CZN[A] α-D-Manp-(1-6)[α-D-Manp-(1-3)]-α-D-Manp-(1-6)[β-D-GlcpNAc-(1-2)-α-D-Manp-(1-3)]-β-D-Manp-(1-4)-α-D-GlcpNAc
1.40
3CZS[A] α-D-Manp
1.30
3D4Y[A] <carb_like_MVL>
1.52
3D4Z[A] <carb_like_GIM>
1.39
3D50[A] <carb_like_OEV>
1.79
3D51[A] <carb_like_GOX>
1.43
3D52[A] 1.60
3DDF[A] <carb_like_GB6>
1.20
3DDG[A] 1.74
3DX0[A] <carb_like_MSN>
1.70
3DX1[A] <carb_like_YHO>
1.21
3DX2[A] <carb_like_MZB>
1.40
3DX3[A] <carb_like_YTB>
1.42
3DX4[A] <carb_like_GOO>
1.38
3EJP[A] <carb_like_HN2>
1.32
3EJQ[A] <carb_like_HN3>
1.45
3EJR[A] <carb_like_HN4>
1.27
3EJS[A] <carb_like_HN5>
1.35
3EJT[A] <carb_like_HN6>
1.35
3EJU[A] <carb_like_HN7>
1.32
6RPC[A] 1.69
6RQZ[A] 1.53
6RRH[A] 2.07
6RRJ[A] 1.95
6RRN[A] 1.59
6RRU[A] 1.90
6RRW[A] 2.15
6RRX[A] 1.84
6RRY[A] 1.86
6RS0[A] 1.80
 lysosomal α-mannosidase (LManII;dLM408;CG6206;Dmel_CG6206) 3.2.1.24 Drosophila melanogaster AAD38576.1
AAF52958.1
AAF52958.2
AAN10754.1
NP_609408.1
NP_723591.1
Q8IPB7
Q9VKV1
cryst    
 α-mannosidase (Ams1;YGL156W;G1861) 3.2.1.24 Saccharomyces cerevisiae S288c CAA88536.1
AAA34422.1
AAA34423.1
CAA96868.1
NP_011359.1
P22855
5JM0[A] 6.30
 α-mannosidase (weak activity) (Mns2;SPAC513.05) (ER) 3.2.1.24 Schizosaccharomyces pombe 972h- CAB58728.1
CAK8727126.1
NP_593979.1
Q9UT61
6LZ1[A,B,C,D] 3.20
7DD9[A,B] 2.40
 CTHT_0067100   Thermochaetoides thermophila DSM 1495 EGS17385.1  
7VQO[A,B,C,D] 2.19
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