Glycoside Hydrolase Family 29

Activities in Familyα-1,3-L-galactosidase (EC 3.2.1.-);
α-1,4-L-fucosidase (EC 3.2.1.-);
α-L-galactosidase (EC 3.2.1.-);
α-L-glucosidase (EC 3.2.1.-);
α-1,3-L-fucosidase (EC 3.2.1.111);
α-1,6-L-fucosidase (EC 3.2.1.127);
α-L-fucosidase (EC 3.2.1.51);
α-1,2-L-fucosidase (EC 3.2.1.63);
Mechanism Retaining e
ClanGH-R
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorAsp (experimental)
External resourcesCAZypedia; PROSITE; SMART;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (12481); Uniprot accession (65); PDB accession (74); 3D entries (19); cryst (0)
Bacteria
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 α-fucosidase (AmGH29D; Amuc_0846) 3.2.1.51 Akkermansia muciniphila ATCC BAA-835 ACD04679.1
QTD81467.1
 
8AYR[A,B] 2.70
 Bovatus_01698   Bacteroides ovatus ATCC 8483 ALJ46339.1  
4ZRX[A] 1.59
 α-1,3/1,4-L-fucosidase / α-galactosidase (BT2192; BT_2192) 3.2.1.111
3.2.1.-
Bacteroides thetaiotaomicron VPI-5482 AAO77299.1
NP_811105.1
Q8A5P6
3EYP[A,B] 1.90
4OUE[A,B] β-D-Galp1S-(1-1)-<non_carb>
2.35
4OZO[A,B] β-D-Galp-(1-1)-<non_carb>
2.60
 α-L-fucosidase (Fuc2970; C12; BtFuc2970; BT2970; BT_2970) 3.2.1.51 Bacteroides thetaiotaomicron VPI-5482 AAO78076.1
NP_811882.1
Q8A3I4
2WVS[A,B,C,D] β-L-Fucp2F
β-L-Fucp2F-(1-4)-ASP
2.19
2WVT[A,B] <carb_like_FHN>
1.80
2WVU[A,B,C,D] α-L-Fucp-(1-1)-<non_carb>
1.95
2WVV[A,B,C,D] 1.73
2XIB[A,B,C,D] <carb_like_DFU>
2.20
2XII[A,B] <carb_like_TA9>
1.80
4J27[A,B] 1.59
4J28[A,B] <carb_like_EAT>
1.73
4JFS[A,B] <carb_like_16Z>
2.00
4JFT[A,B] <carb_like_1KN>
2.10
4JFU[A,B] <carb_like_K80>
1.66
4JFV[A,B,C,D] <carb_like_H57>
1.88
4JFW[A,B,C,D] <carb_like_H58>
2.10
4JL1[A,B] <carb_like_LM5>
1.68
4JL2[A,B] <carb_like_LM5>
1.70
4PCS[A,B,C,D] <carb_like_2M7>
1.77
4PCT[A,B,C,D] <carb_like_H76>
2.10
4PEE[A,B,C,D] <carb_like_2OX>
1.95
4WSJ[A,B,C,D] <carb_like_3U3>
1.64
4WSK[A,B,C,D] <carb_like_3U2>
1.92
5HDR[A,B,C,D] 2.30
5I5R[A,B,C,D] 2.10
6HZY[A,B] α-L-Fucp1N-(1-1)-<non_carb>
β-L-Fucp1N-(1-1)-<non_carb>
1.70
 α-L-fucosidase (C06; BT3798) 3.2.1.51 Bacteroides thetaiotaomicron VPI-5482 AAO78903.1
NP_812709.1
 
3GZA[A,B] 1.60
 antigen α-1,6-fucosidase (TT1819;GYM67_05190) 3.2.1.127 Bifidobacterium asteroides ESL0447 QYN60528.1  
8P1R[A,B,C,D,E,F] 1.66
 α-1,3/1,4-L-fucosidase (BiAfcB;Blon_2336) 3.2.1.51
3.2.1.111
3.2.1.-
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 ACJ53394.1 B7GNN8
3MO4[A,B] 1.90
3UES[A,B] <carb_like_DFU>
1.60
3UET[A,B] α-L-Fucp-(1-4)[β-D-Galp-(1-3)]-β-D-GlcpNAc
2.10
 α-L-glucosidase 29A (ClAgl29A; B879_03288) 3.2.1.- Cecembia lonarensis WP_009186306.1  
7XSF[A,B] 2.01
 α-L-glucosidase 29B (ClAgl29B; B879_03287) 3.2.1.- Cecembia lonarensis WP_009186305.1  
7XSG[A,B] 1.61
7XSH[A,B] β-L-Glcp
1.71
 α-1,6-L-fucosidase C (AlfC; A01; LCABL_29340) 3.2.1.127 Lacticaseibacillus casei BL23 CAQ67984.1 B3WBB5
6O18[A,B,C,D] 2.55
6O1A[A,B,C,D] β-L-Fucp
2.60
6O1C[A,B,C,D,E,F,G,H] α-L-Fucp-(1-1)-<non_carb>
2.60
6O1I[A,B,C,D] 3.55
6O1J[A,B,C,D,E,F,G,H] β-L-Fucp
2.00
6OHE[A,B,C,D] α-L-Fucp-(1-6)-β-D-GlcpNAc
3.14
 multi-functionnal antigen exo-α-1,3-fucosidase and antigen exo-α-1,4-fucosidase (CDL26_02305) 3.2.1.111
3.2.1.-
Mediterraneibacter gnavus RJX1124 PLT74914.1 A0A2N5PIE7
6TR3[A] β-L-Fucp
1.70
6TR4[A,B] α-L-Fucp
1.45
 α-L-fucosidase (aLfuk1; A08) 3.2.1.51 Paenibacillus thiaminolyticus CCM 3599 CBM40947.1 E3PQQ9
6GN6[A,B,C,D,E,F] α-D-Glcp
α-D-Glcp-(1-4)-α-D-Glcp
2.20
 α-1,3-L-galactosidase active on porphyrooligosaccharides desulfated at the non-reducing end (BpGH29; BACPLE_01702) 3.2.1.- Phocaeicola plebeius DSM 17135 EDY95436.1 B5CYA5
7LJJ[A] 1.90
7LK7[A] α-L-Galp
2.19
7LNP[A,B,C,D] α-L-Galp-(1-1)-<non_carb>
2.70
7SNK[A] 2.00
 α-1,3/1,4-L-fucosidase (SpGH29; SP_2146) 3.2.1.111
3.2.1.-
Streptococcus pneumoniae TIGR4 AAK76203.1
ABA35887.1
NP_346563.1
A0A0H2US78
Q97NA6
6OR4[A,B] α-L-Fucp-(1-4)[β-D-Galp-(1-3)]-β-D-GlcpNAc
2.10
6ORF[A,B] β-D-Galp-(1-4)[α-L-Fucp-(1-3)]-α-D-GlcpNAc
1.70
6ORG[A,B] 1.72
6ORH[A,B] α-L-Fucp-(1-2)-β-D-Galp-(1-4)[α-L-Fucp-(1-3)]-α-D-GlcpNAc
1.62
 α-L-fucosidase (TmaFuc; C09; TM0306; Tmari_0304) 3.2.1.51 Thermotoga maritima MSB8 AAD35394.1
AGL49230.1
AHD17930.1
AKE28107.1
NP_228118.1
G4FHM0
Q9WYE2
1HL8[A,B] 2.4
1HL9[A,B] β-L-Fucp2F-(1-4)-ASP
2.25
1ODU[A,B] β-L-Fucp
2.8
2WSP[A,B] α-L-Fucp-(1-2)-β-L-Fucp1N-(1-1)-<non_carb>
2.65
2ZWY[A,B] 2.75
2ZWZ[A,B] <carb_like_ZWZ>
2.36
2ZX5[A,B] <carb_like_ZX5>
2.65
2ZX6[A,B] <carb_like_ZX6>
2.42
2ZX7[A,B] <carb_like_ZX7>
2.48
2ZX8[A,B] <carb_like_ZX8>
2.33
2ZX9[A,B] <carb_like_ZX9>
2.62
2ZXA[A,B] <carb_like_ZXA>
2.57
2ZXB[A,B] <carb_like_ZXB>
2.61
2ZXD[A,B] <carb_like_ZXD>
2.15
 α-L-fucosidase (VejFCD; VEJY3_11310) 3.2.1.51 Vibrio sp. EJY3 AEX22740.1 A0A8I3AZV2
7DB5[A] 1.90
Eukaryota
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 α-L-fucosidase (Fco1;FgFCO1;fg11254) 3.2.1.51 Fusarium graminearum PH-1 AFR68935.1
CEF87037.1
I1S384
J9UN47
4NI3[A,B] 1.40
4PSP[A,B] 1.56
4PSR[A,B] β-L-Fucp
1.38
 α-L-fucosidase (FucA1; HsFucA1; B08) 3.2.1.51 Homo sapiens AAA52481.1
AAA35519.1
AAA52482.1
AAH17338.1
ABA67657.1
BAC04002.1
BAE45738.1
BAG37210.1
BAH12098.1
BAH13453.1
CAH74004.1
CAH74004.2
NP_000138.1
B5MDC5
B7Z362
P04066
Q8NAC2
7PLS[A,B,C,D] 2.49
7PM4[A,B,C,D] <carb_like_DFU>
2.49
unclassified
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 GH29_0940 (partial)   unidentified    
5K9H[A] 2.03
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