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Glycoside Hydrolase Family 13 / Subf 8

Activities in Sub Family[retaining] α-1,4-glucan branching enzyme (EC 2.4.1.18);
[retaining] α-amylase (EC 3.2.1.1);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1085); Uniprot accession (59); PDB accession (10); 3D entries (3); cryst (0)
Summary
Download GH13_8 (3163) Taxonomic display Structure (3) Characterized (27)
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Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 INE77_02565 (GlgB)   Parabacteroides distasonis CL03T12C09 QUT96077.1     8
 INE86_02074 (GlgB)   Parabacteroides distasonis CL06T03C10 QUT53555.1     8
 INE94_00030 (GlgB)   Parabacteroides distasonis CL11T00C22 QUT18218.1     8
 V3C16_02250   Parabacteroides distasonis DFI.5.23 WVP72456.1     8
 P2T59_02325   Parabacteroides distasonis F1-28 WET64832.1     8
 I6J64_19475   Parabacteroides distasonis FDAARGOS_1234 QRO16341.1     8
 FOB23_14985   Parabacteroides distasonis FDAARGOS_615 QIX66321.1     8
 FIU22_03860   Parabacteroides distasonis FDAARGOS_759 QKH96796.1     8
 Q8809_02230   Parabacteroides distasonis GP102 WMI43165.1     8
 DN0286_04320   Parabacteroides distasonis NBRC 113806 BBK90146.1     8
 P8F78_01995   Parabacteroides distasonis PC19 WRY44009.1     8
 NXY11_04100   Parabacteroides faecis BFG-489 UVQ47439.1     8
 K6V26_05895   Parabacteroides goldsteinii BFG-241 UBD75869.1     8
 NQ564_08685   Parabacteroides johnsonii DSM 18315 UWP44601.1     8
 NQ542_02550   Parabacteroides merdae ATCC 43184 UWP47000.1     8
 K6V24_17075   Parabacteroides merdae BFG-280 UBD61093.1     8
 INE87_01383 (GlgB)   Parabacteroides merdae CL06T03C08 QUT48946.1     8
 NEE14_015550   Parabacteroides sp. AD58 WWV66359.1     8
 CI960_05670   Parabacteroides sp. CT06 AST52874.1     8
 PC1C4_21870   Paraprevotella clara 1C4 BDI75465.1     8
 EAL2_808p04160 (Glgb1)   Peptoclostridium acidaminophilum DSM 3953 AHM57920.1     8
 PEPS_26050 (GlgB)   Persicobacter psychrovividus NBRC 101262 BDD00325.1     8
 ING2E5A_2334 (Glc3)   Petrimonas mucosa DSM 28695 SCM59136.1     8
 PEIBARAKI_2196   Petrimonas sp. IBARAKI BBA16069.1
BBD46205.1		     8
 I6J50_06435   Phocaeicola coprophilus FDAARGOS_1220 QRO25870.1     8
 ABI39_17310   Phocaeicola dorei CL03T12C01 AND20968.1     8
 INE79_01160 (GlgB)   Phocaeicola dorei CL06T03C03 QUT84436.1     8
 KQP62_03660   Phocaeicola dorei DH3716Y UYV09841.1     8
 GKD17_11815   Phocaeicola dorei DSM 17855 QJR77022.1     8
 NQ486_18595   Phocaeicola dorei DSM 17855 UWN81794.1     8
 EL88_09945   Phocaeicola dorei isolate HS1_L_1_B_010 AII63474.1     8
 GV66_17900   Phocaeicola dorei isolate HS1_L_3_B_079 AII69445.1     8
 IY41_18610   Phocaeicola dorei isolate HS2_L_2_B_045b ALA75255.1     8
 GN305_11980   Phocaeicola dorei JR01 QJR72787.1     8
 GN306_11590   Phocaeicola dorei JR02 QJR68452.1     8
 GN307_11585   Phocaeicola dorei JR03 QJR64188.1     8
 GN308_11685   Phocaeicola dorei JR04 QJR59836.1     8
 GN309_11480   Phocaeicola dorei JR05 QJR55365.1     8
 Bacsa_0615   Phocaeicola salanitronis DSM 18170 ADY35211.1     8
 BVU_3322   Phocaeicola vulgatus ATCC 8482 ABR40948.1     8
 K6V28_08040   Phocaeicola vulgatus BFG-191 UBD85777.1     8
 NXX81_17785   Phocaeicola vulgatus BFG-201 UVR04254.1     8
 NXU81_16215   Phocaeicola vulgatus BFG-626 UVO93313.1     8
 INE85_01984 (GlgB)   Phocaeicola vulgatus CL06T03C24 QUT57939.1     8
 M0N98_02784 (GlgB)   Phocaeicola vulgatus CL10T00C06 USS69103.1     8
 V3C07_18390   Phocaeicola vulgatus DFI.4.81 WVP75739.1     8
 I6I55_11915   Phocaeicola vulgatus FDAARGOS_1098 QQY36939.1     8
 I6I56_08630   Phocaeicola vulgatus FDAARGOS_1099 QQY44132.1     8
 GAIMETA21S03_31970   Phocaeicola vulgatus MG01-03 BDC07314.1     8
 GAIMETA21S07_31150   Phocaeicola vulgatus MG01-07 BDC11327.1     8
 GAIMETA21S10_32600   Phocaeicola vulgatus MG01-10 BDC15496.1     8
 BvMPK_2961 (fragment)   Phocaeicola vulgatus mpk ALK85542.1     8
 VIC01_02119 (GlgB)   Phocaeicola vulgatus VIC01 QEW36565.1     8
 IPV69_18815   Phycisphaerales bacterium M1803 QOV88287.1     8
 HED60_00190   Planctomycetales bacterium zrk34 QNN20747.1     8
 RJD25_27100   Pontibacter sp. G13 WNJ18539.1     8
 Poras_0535   Porphyromonas asaccharolytica DSM 20707 AEE12488.1     8
 NCTC12856_00390 (GlgB)   Porphyromonas cangingivalis NCTC12856 VEJ02408.1     8
 PGF_00017500   Porphyromonas gingivalis 381 ALJ26167.1     8
 PGA7_00016710   Porphyromonas gingivalis A7436 AKV64861.1     8
 NY148_08175   Porphyromonas gingivalis A7436-C WCG00738.1     8
 PGS_00018390   Porphyromonas gingivalis A7A1-28 ALO30502.1     8
 PGJ_00016180   Porphyromonas gingivalis AJW4 ALA94206.1     8
 PGN_1772   Porphyromonas gingivalis ATCC 33277 BAG34291.1
AUR49127.1		     8
 NY151_01660   Porphyromonas gingivalis ATCC 49417 WCG03478.1     8
 NF668_09345   Porphyromonas gingivalis grey WKD54493.1     8
 NY149_09635   Porphyromonas gingivalis HG1691old WCF98747.1     8
 EG14_00210   Porphyromonas gingivalis HG66 AIJ34574.1     8
 CS059_02455   Porphyromonas gingivalis KCOM 2796 ATS01967.1     8
 CS374_05810   Porphyromonas gingivalis KCOM 2798 ATS04542.1     8
 CS387_06290   Porphyromonas gingivalis KCOM 2799 ATS06612.1     8
 CS388_06435   Porphyromonas gingivalis KCOM 2800 ATS08694.1     8
 CS543_02685   Porphyromonas gingivalis KCOM 2801 ATS09876.1     8
 CS544_07420   Porphyromonas gingivalis KCOM 2802 ATR90924.1     8
 CS545_01280   Porphyromonas gingivalis KCOM 2803 ATR91844.1     8
 CS546_03880   Porphyromonas gingivalis KCOM 2804 ATR94236.1     8
 CS548_10265   Porphyromonas gingivalis KCOM 2805 ATR97400.1     8
 CS550_00455   Porphyromonas gingivalis KCOM 3001 ATR97788.1     8
 CS549_03330   Porphyromonas gingivalis KCOM 3131 ATS00183.1     8
 QP877_08560   Porphyromonas gingivalis LyEC02 WIM91131.1     8
 KC155_02145   Porphyromonas gingivalis LyG-1 QUI91930.1     8
 KDH82_02145   Porphyromonas gingivalis LyG-2 QUI89983.1     8
 CF002_0101 (GlgB)   Porphyromonas gingivalis TDC 60 AUR47371.1     8
 PGTDC60_0101 (GlgB)   Porphyromonas gingivalis TDC60 BAK24271.1     8
 MCS25_08125   Porphyromonas gingivalis W50 USI97474.1     8
 MCS27_08130   Porphyromonas gingivalis W50/BE1 USI95568.1     8
 MCS24_08115   Porphyromonas gingivalis W50/BR1 USI93681.1     8
 CF003_1793 (GlgB)   Porphyromonas gingivalis W83 AUR45642.1     8
 PG1793   Porphyromonas gingivalis W83 AAQ66793.1
NP_905894.1		     8
 NF669_09340   Porphyromonas gingivalis yellow WKD52443.1     8
 CE91St14_01440   Porphyromonas somerae CE91-St14 BDE81116.1     8
 J4862_05030   Porphyromonas sp. oral taxon 275 W7780 QUB42372.1     8
 QP022_00735   Prevotella bivia PLW0727 WIL17844.1     8
 TOH2715_07460   Prevotella bivia TOH-2715 BFG44339.1     8
 L6468_08420   Prevotella communis E1-9 UKK61030.1     8
 Prede_0676   Prevotella dentalis DSM 3688 AGB28031.1     8
 J5A64_04975   Prevotella denticola F0105 QUI94607.1     8
 J4866_03520   Prevotella denticola F0115 QUB93419.1     8
 J4855_08420   Prevotella denticola F0119 QUB90256.1     8
 J4860_03015   Prevotella denticola F0288 QUB88869.1     8
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