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Glycoside Hydrolase Family 13 / Subf 8

Activities in Sub Family[retaining] α-1,4-glucan branching enzyme (EC 2.4.1.18);
[retaining] α-amylase (EC 3.2.1.1);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1085); Uniprot accession (59); PDB accession (10); 3D entries (3); cryst (0)
Summary
Download GH13_8 (3163) Taxonomic display Structure (3) Characterized (27)
| 1 | ... | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | ... | 11 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 TOL2_C24780 (GlgB)   Desulfobacula toluolica Tol2 CCK80639.1     8
 Dmul_18060 (GlgB)   Desulfococcus multivorans DSM 2059 AOY58579.1
AQV00885.1		     8
 DSLASN_08190   Desulfoluna limicola ASN36 BCS95187.1     8
 dnl_17960 (GlgB)   Desulfonema limicola 5ac10 QTA79525.1     8
 dnm_012590 (GlgB)   Desulfonema magnum 4be13 QTA85254.1     8
 HRM2_23620 (Glgb2)   Desulforapulum autotrophicum HRM2 ACN15457.1     8
 DSCA_49310   Desulfosarcina alkanivorans PL12 BBO71001.1     8
 DSCO28_53810   Desulfosarcina ovata 28bB2T BBO84815.1     8
 DSCOOX_44970   Desulfosarcina ovata oXyS1 BBO91317.1     8
 DSCW_31680   Desulfosarcina widdelii PP31 BBO75751.1     8
 Dole_0847   Desulfosudis oleivorans Hxd3 ABW66657.1     8
 Ddes_1321   Desulfovibrio desulfuricans ATCC 27774 ACL49223.1     8
 KUD97_10440   Desulfovibrio desulfuricans Edelweiss UIA99375.1     8
 DDIC_06905   Desulfovibrio desulfuricans IC1 QCC85611.1     8
 J8J02_07785   Desulfovibrio desulfuricans L4 QTO39064.1     8
 AXF13_06920   Desulfovibrio fairfieldensis CCUG 45958 AMD89867.1     8
 DESU86_0116   Desulfovibrio sp. 86 VZH32232.1     8
 CNY67_08700   Desulfovibrio sp. G11 ATD81447.1     8
 DSVG11_0010   Desulfovibrio sp. G11 SPD34140.1     8
 G0Q07_00235   Draconibacterium halophilum M1 QIA06255.1     8
 FH5T_06805   Draconibacterium orientale FH5 AHW59413.1     8
 FDZ78_10735   Duncaniella sp. B8 QCP72988.1     8
 E7745_07040   Duncaniella sp. C9 QCD39297.1     8
 JS578_12715   Dysgonomonadaceae bacterium zrk40 QRX63695.1     8
 DCPSUM001_09140   Dysgonomonas capnocytophagoides SMU001 BES60670.1     8
 G7050_14990   Dysgonomonas sp. HDW5A QIK61736.1     8
 G7051_15425   Dysgonomonas sp. HDW5B QIK56317.1     8
 DOK78_002692   Enterococcus sp. DIV2402 WYJ78036.1     8
 EUCAG14_29270 (Glgb_2)   Eubacterium callanderi DSM 107592 WPK77360.1     8
 EUCA2A_11980 (Glgb_2)   Eubacterium callanderi DSM 2593 WPK67045.1     8
 EUCA11A_11980 (Glgb_2)   Eubacterium callanderi DSM 2594 WPK71343.1     8
 EUCAMar_01730 (Glgb_1)   Eubacterium callanderi DSM 3468 WPK82656.1     8
 B2M23_09465   Eubacterium limosum ATCC 8486 ARD65756.1     8
 M5595_07955   Eubacterium limosum B2 UQZ24158.1     8
 ELI_2984   Eubacterium limosum KIST612 ADO37953.1     8
 ACH52_2717   Eubacterium limosum SA11 ALU15473.1     8
 EUMA32_24180 (Glgb_2)   Eubacterium maltosivorans DSM 20517 WPK80989.1     8
 CPZ25_019925   Eubacterium maltosivorans YI QCT73488.1     8
 ING2E5B_0932 (GbeA)   Fermentimonas caenicola ING2-E5B CEA15693.1     8
 KM029_04040   Flammeovirga kamogawensis YS10 QWG08118.1     8
 EI427_06470   Flammeovirga pectinis L12M1 AZQ61894.1     8
 MY04_1313 (GlgB)   Flammeovirga sp. MY04 ANQ48690.2
ANQ48690.1		     8
 KMW28_09700   Flammeovirga yaeyamensis NBRC:100898 QWG03828.1     8
 R9C00_09465   Flammeovirgaceae bacterium SG7u.111 WPO37677.1     8
 UJ101_00496 (GlgB)   Flavobacteriaceae bacterium UJ101 APD06043.1     8
 FUAX_36230 (GlgB)   Fulvitalea axinellae DSM 100852 BDD11191.1     8
 LVD16_18440   Fulvivirga ligni W9P-11 UII19824.1     8
 JR347_08755   Fulvivirga lutea S481 QSE99162.1     8
 LVD15_20420   Fulvivirga maritima SW1-E11 UII25648.1     8
 HAHE_00440 (GlgB)   Haloferula helveola CN-1 BCX46136.1     8
 HIF96_00115   Helcococcus kunzii H10 QZO76466.1     8
 GUI37_00115   Helcococcus kunzii H13 QUY63998.1     8
 EQF90_000250   Helcococcus ovis KG-36 WNZ01315.1     8
 NQ518_02680   Hoylesella buccalis ATCC 35310 UWP49980.1     8
 AS203_05940   Hoylesella enoeca F0113 ALO48673.1     8
 MUN82_02395   Hymenobacter aerilatus 5413J-13 UOR05962.1     8
 O3303_09640   Hymenobacter canadensis PAMC 29467 WBA43812.1     8
 MUN80_23435   Hymenobacter cellulosivorans 5116S-27 UOQ52686.1     8
 FHG12_14275   Hymenobacter jejuensis 17J68-5 QDA61195.1     8
 MTP16_22480   Hymenobacter monticola KACC 22596 UOE33867.1     8
 DDQ68_10135   Hymenobacter nivis NBRC 111535 AWM33102.1     8
 D3Y59_00805   Hymenobacter oligotrophus sh-6 AYA35718.1     8
 A0257_18355   Hymenobacter psoromatis PAMC 26554 AMR28864.1     8
 HER32_03370   Hymenobacter russus BT18 QIX60279.1     8
 AUC43_10990   Hymenobacter sedentarius DG5B ALW85570.1     8
 H4317_05990   Hymenobacter sediminicola S2-20-2 QNH63353.1     8
 MUN81_07670   Hymenobacter sp. 5317J-9 UOQ99367.1     8
 MUN83_11600   Hymenobacter sp. 5414T-23 UOQ79499.1     8
 N008_13880   Hymenobacter sp. APR13 AII53060.1     8
 GKZ68_12410   Hymenobacter sp. BRD128 QKG57348.1     8
 GUY19_19745   Hymenobacter sp. BT182 QHJ09394.1     8
 AM218_02985   Hymenobacter sp. DG25A ALD20383.1     8
 PK28_13450   Hymenobacter sp. DG25B AIZ65242.1     8
 SD425_06565   Hymenobacter sp. GOD-10R WRQ29927.1     8
 G7064_06710   Hymenobacter sp. HDW8 QIL75569.1     8
 F1C16_11625   Hymenobacter sp. NBH84 QNE40161.1     8
 AXW84_15350   Hymenobacter sp. PAMC 26628 AMJ66649.1     8
 OIS53_00865   Hymenobacter sp. YIM 151500-1 UYZ63411.1     8
 OIS50_00860   Hymenobacter sp. YIM 151858-1 UYZ59365.1     8
 MWH26_12545   Hymenobacter sublimis 5516S-25 UPL48017.1     8
 Hsw_1014   Hymenobacter swuensis DY53 AHJ96609.1     8
 HMJ29_01405   Hymenobacter taeanensis TS19 QJX45662.1     8
 MTX78_16710   Hymenobacter tibetensis KACC 21982 UOG73754.1     8
 MUN86_16545   Hymenobacter volaticus 5420S-77 UOQ65154.1     8
 O9Z63_11515   Hymenobacter yonginensis KCTC 22745 WBO83007.1     8
 RT717_26270   Imperialibacter roseus P4T WOK06585.1     8
 L21SP4_00494 (GlgB)   Kiritimatiella glycovorans L21-Fru-AB AKJ63773.1     8
 ALGA_3663   Labilibaculum antarcticum SPP2 BAX81955.1     8
 D7I46_10780   Lactococcus allomyrinae 1JSPR-7 AYG01503.1     8
 LL158_0128   Lactococcus cremoris 158 ARD90466.1     8
 D6869_00855   Lactococcus cremoris 4B0 QTA75612.1     8
 Llc71_01180 (GlgB)   Lactococcus cremoris 7-1 BDE08423.1     8
 LLB26_0127   Lactococcus cremoris B26 QRZ28965.1     8
 LLCC_0440 (GlgB)   Lactococcus cremoris C4 BBC74868.1     8
 LLC_16280 (GlgB)   Lactococcus cremoris EPSC BCO06388.1     8
 HG420_03635   Lactococcus cremoris F QJD19148.1     8
 LLF72_00695   Lactococcus cremoris F.2.7 WKT05181.1     8
 LLG32_16300 (GlgB)   Lactococcus cremoris G3-2 BCO03536.1     8
 JWR96_10415   Lactococcus cremoris GR0507 QSE63348.1     8
 LLJM1_0119   Lactococcus cremoris JM1 ARE27590.1     8
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