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Glycoside Hydrolase Family 13 / Subf 6

Activities in Sub Family[retaining] α-amylase (EC 3.2.1.1);
[retaining] maltohexaose-producing α-amylase (EC 3.2.1.98);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (77); Uniprot accession (33); PDB accession (13); 3D entries (3); cryst (0)
Summary
Download GH13_6 (629) Taxonomic display Structure (3) Characterized (18)
| 1 | 2 | 3 | 4 | 5 | 6 |
Eukaryota
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 U9M48_009694   Paspalum notatum var. saurae isolate R1 WVZ59573.1     6
 U9M48_014606   Paspalum notatum var. saurae isolate R1 WVZ65198.1     6
 U9M48_026234   Paspalum notatum var. saurae isolate R1 WVZ78539.1     6
 U9M48_014599   Paspalum notatum var. saurae isolate R1 WVZ65191.1     6
 U9M48_032412   Paspalum notatum var. saurae isolate R1 WVZ85490.1     6
 U9M48_032407 (fragment)   Paspalum notatum var. saurae isolate R1 WVZ85485.1     6
 α-amylase   Phaseolus vulgaris BAA33879.1     6
 c_pp010010057r   Physcomitrium patens CAC43721.1     6
 50_ck1_a10fwd (fragment)   Physcomitrium patens CAC43703.1     6
 WS02747_C17   Picea sitchensis ABR16554.1     6
 WS02910_I17   Picea sitchensis ABK24287.1     6
 WS0291_K17   Picea sitchensis ABK24434.1     6
 PSENEW3_00003313 (Amy3)   Picochlorum sp. SENEW3 WPT15372.1     6
 PSENEW3_00001695 (Amy1.2) (fragment)   Picochlorum sp. SENEW3 WPT13856.1     6
 PSENEW3_00000079 (Amy3)   Picochlorum sp. SENEW3 WPT13947.1     6
 0_4803_01 (fragment)   Pinus lambertiana AEW07546.1     6
 0_4803_01 (fragment)   Pinus radiata AEW07547.1     6
 CL1075Contig1_03 (fragment)   Pinus radiata AEW08661.1     6
 CL1075Contig1_03 (short fragment)   Pinus taeda AFG57204.1
AFG57197.1
AFG57198.1
AFG57199.1
AFG57200.1
AFG57201.1
AFG57202.1
AFG57203.1
AFG57205.1
AFG57206.1
AFG57207.1
AFG57208.1
AFG57209.1
AFG57210.1
AFG57211.1
AFG57212.1
AFG57213.1		     6
 0_4803_01 (short fragment)   Pinus taeda AFG68475.1
AFG68464.1
AFG68465.1
AFG68467.1
AFG68468.1
AFG68469.1
AFG68470.1
AFG68472.1		     6
 0_4803_01 (short fragment)   Pinus taeda AFG68471.1
AFG68463.1
AFG68466.1
AFG68473.1
AFG68474.1		     6
 0_9562_01 (fragment)   Pinus taeda AFG66542.1
AFG66543.1
AFG66544.1
AFG66545.1
AFG66546.1
AFG66547.1
AFG66548.1
AFG66549.1
AFG66550.1
AFG66551.1
AFG66552.1
AFG66553.1
AFG66554.1
AFG66555.1
AFG66556.1		     6
 ORF (fragment)   Pinus taeda AEX12084.1
AEX12085.1
AEX12086.1
AEX12087.1
AEX12088.1
AEX12089.1
AEX12090.1
AEX12091.1		     6
 Aamy1   Plantago major CAH58639.1     6
 α-amylase (PcAMY1)   Pogostemon cablin AHK06058.1     6
 α-amylase (AMY), partial (plastid) (fragment)   Polytomella parva 4 QKY15315.1     6
 α-amylase (AMY) (plastid)   Polytomella parva 4 QKY15147.1     6
 4218   Prasinoderma coloniale CCMP1413 (Praco1_1)       6
 1463   Prasinoderma coloniale CCMP1413 (Praco1_1)       6
 Prudu_014780 (fragment)   Prunus dulcis BBH03814.1     6
 Prudu_022094 (fragment)   Prunus dulcis BBH09563.1     6
 Prudu_022092 (fragment)   Prunus dulcis BBH09561.1     6
 Prudu_003139   Prunus dulcis BBG94776.1     6
 Prudu_002429   Prunus dulcis BBG94204.1     6
 Prudu_003724   Prunus dulcis BBG95240.1     6
 Prudu_010174   Prunus dulcis BBH00240.1     6
 α-amylase, partial (RsamY) (fragment)   Rhododendron hybrid cultivar CEF90233.1     6
 127605   Selaginella moellendorffii (Selmo1)       6
 33940   Selaginella moellendorffii (Selmo1)       6
 79072   Selaginella moellendorffii (Selmo1)       6
 97625   Selaginella moellendorffii (Selmo1)       6
 404058   Selaginella moellendorffii (Selmo1)       6
 α-amylase (Amy1)   Solanum tuberosum AAA91884.1
ACV30014.1
ACZ26470.1
CAA01542.1
CAA01546.1		     6
 α-amylase (fragment)   Solanum tuberosum AAA91883.1
CAA01544.1		     6
 MTR67_021177   Solanum verrucosum WMV27792.1     6
 MTR67_020817 (fragment)   Solanum verrucosum WMV27432.1     6
 MTR67_021885   Solanum verrucosum WMV28500.1     6
 MTR67_013335   Solanum verrucosum WMV19950.1     6
 MTR67_008471   Solanum verrucosum WMV15086.1     6
 AYBTSS11_LOCUS9415 (fragment)   Sphenostylis stenocarpa CAJ1939920.1     6
 AYBTSS11_LOCUS9412 (fragment)   Sphenostylis stenocarpa CAJ1939915.1     6
 AYBTSS11_LOCUS1398   Sphenostylis stenocarpa CAJ1830856.1     6
 AYBTSS11_LOCUS24740 (fragment)   Sphenostylis stenocarpa CAJ1972688.1     6
 AYBTSS11_LOCUS24647   Sphenostylis stenocarpa CAJ1972596.1     6
 AYBTSS11_LOCUS5407   Sphenostylis stenocarpa CAJ1931707.1     6
 SI7747_15018113   Spirodela intermedia CAA2632497.1     6
 SI7747_10013134   Spirodela intermedia CAA2627481.1     6
 SI8410_15019501   Spirodela intermedia CAA7408823.1     6
 SI8410_10014218   Spirodela intermedia CAA7403540.1     6
 918   Symbiodinium microadriaticum CCMP2467 (Symmic1)       6
 36100   Symbiodinium microadriaticum CCMP2467 (Symmic1)       6
 39771   Symbiodinium microadriaticum CCMP2467 (Symmic1)       6
 5904   Symbiodinium microadriaticum CCMP2467 (Symmic1)       6
 OEZ85_004911   Tetradesmus obliquus DOE0152z WIA20515.1     6
 OEZ85_004128 (fragment)   Tetradesmus obliquus DOE0152z WIA19518.1     6
 OEZ85_001318   Tetradesmus obliquus DOE0152z WIA22952.1     6
 OEZ86_004498   Tetradesmus obliquus DOE0152z WIA40821.1     6
 OEZ86_009881   Tetradesmus obliquus DOE0152z WIA43399.1     6
 OEZ86_005849 (fragment)   Tetradesmus obliquus DOE0152z WIA39795.1     6
 OEZ85_009710   Tetradesmus obliquus DOE0152z WIA18241.1     6
 OEZ86_001842   Tetradesmus obliquus DOE0152z WIA38521.1     6
 QQP08_008142   Theobroma cacao isolate Sca6 WRX15655.1     6
 QQP08_023608   Theobroma cacao isolate Sca6 WRX31121.1     6
 QQP08_023609   Theobroma cacao isolate Sca6 WRX31122.1     6
 QQP08_022694   Theobroma cacao isolate Sca6 WRX30207.1     6
 QQP08_023607   Theobroma cacao isolate Sca6 WRX31120.1     6
 TAV2_ LOCUS 15254   Thlaspi arvense CAH2067533.1     6
 TAV2_ LOCUS 16645   Thlaspi arvense CAH2066446.1     6
 TAV2_ LOCUS 23732   Thlaspi arvense CAH2078022.1     6
 8299   Toxoplasma gondii ME49 (Toxgon1)       6
 amylase, partial (fragment)   Triticum aestivum AMC30631.1     6
 α-amylase 2, partial (fragment)   Triticum aestivum ANZ54399.1     6
 α-amylase 3   Triticum aestivum ANZ54396.1     6
 α-amylase 2, partial (fragment)   Triticum aestivum ANZ54397.1     6
 α-amylase 3   Triticum aestivum ANZ54395.1     6
 α-amylase 2, partial (fragment)   Triticum aestivum ANZ54398.1     6
 α-amylase 1   Triticum aestivum ATY36095.1     6
 α-amylase 4   Triticum aestivum ATY36105.1     6
 α-amylase 1   Triticum aestivum ATY36099.1     6
 α-amylase 4   Triticum aestivum ATY36106.1     6
 α-amylase 1   Triticum aestivum ATY36094.1     6
 α-amylase 2   Triticum aestivum ATY36102.1     6
 α-amylase 1   Triticum aestivum ATY36098.1     6
 α-amylase 4   Triticum aestivum ATY36107.1     6
 α-amylase 2   Triticum aestivum ATY36103.1     6
 α-amylase 2   Triticum aestivum ATY36101.1     6
 α-amylase 1   Triticum aestivum ATY36093.1     6
 α-amylase 2   Triticum aestivum ATY36104.1
WET31407.1		     6
 α-amylase 1   Triticum aestivum ATY36097.1     6
 α-amylase 1   Triticum aestivum ATY36100.1     6
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