Glycoside Hydrolase Family 13 / Subf 46

Activities in Sub Family[retaining] α-amylase (EC 3.2.1.1);
[retaining] neopullulanase (EC 3.2.1.135);
[retaining] cyclomaltodextrinase (EC 3.2.1.54);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (1269); Uniprot accession (6); PDB accession (6); 3D entries (1); cryst (0)
Bacteria
Protein Name EC# OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
Subf
 cyclomaltodextrinase (CDase; FspCMD) 3.2.1.54 Flavobacterium sp. 92 CAD32957.1 Q8KKG0
1H3G[A,B] 2.10
3EDD[A,B] a-cyclodextrin
2.65
3EDE[A,B] 1.71
3EDF[A,B] a-cyclodextrin
1.65
3EDJ[A,B] b-cyclodextrin
1.69
3EDK[A,B] α-D-4-deoxy-Glcp-(1-4)-α-D-Glcp-(1-4)-α-D-Glcp-(1-4)-α-D-Glcp-(1-4)-α-D-Glcp-(1-4)-α-D-Glcp-(1-4)-α-D-Glcp-(1-4)-α-D-Glcp
1.77
46
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