Glycoside Hydrolase Family 13 / Subf 1

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (274); Uniprot accession (86); PDB accession (9); 3D entries (5); cryst (0)
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Haur_2969   Herpetosiphon aurantiacus DSM 785 ABX05607.1 A9B3N5   1
 α-amylase, partial   Laceyella sacchari LP175 AQX78080.1     1
 α-amylase   Laceyella sp. DS3 CUT08821.1     1
 AR543_14675   Paenibacillus bovis BD3526 ANF97123.1     1
 B4V02_00660   Paenibacillus kribbensis AM49 ASR45322.1     1
 PM3016_1758   Paenibacillus mucilaginosus 3016 AFC28670.1     1
 B2K_08955   Paenibacillus mucilaginosus K02 AFH60845.1
AFK65324.1
    1
 KNP414_01446   Paenibacillus mucilaginosus KNP414 AEI40010.1     1
 ABE82_24690   Paenibacillus peoriae HS311 ALA44490.1     1
 multidomain α-amylase / β-amylase 3.2.1.1
3.2.1.2
Paenibacillus polymyxa AAA85446.1
CAA68344.1
P21543   1
 VK72_25420   Paenibacillus polymyxa ATCC 15970 APQ62243.1     1
 LK13_11960   Paenibacillus polymyxa CF05 AIY11643.1     1
 X809_26455   Paenibacillus polymyxa CR1 AHC22381.1
AIW42232.1
    1
 PPE_04705   Paenibacillus polymyxa E681 ADM72464.1
ADM72464.2
E0RL27   1
 AOU00_11610   Paenibacillus polymyxa J AOK90417.1     1
 PPM_4861 (Amyb7)   Paenibacillus polymyxa M1 CCI71668.1     1
 RE92_12815   Paenibacillus polymyxa Sb3-1 AJE51857.1     1
 PPSC2_c5221   Paenibacillus polymyxa SC2 ADO59158.1 E3E7E7   1
 PPSQR21_049530   Paenibacillus polymyxa SQR-21 SQR21 AHM68537.1     1
 PPYC1_01130   Paenibacillus polymyxa YC0136 APB69060.1     1
 ASL14_13175   Paenibacillus sp. IHB B 3084 ALP36976.1     1
 HPL003_06095   Paenibacillus terrae HPL-003 AET57982.1     1
 α-amylase (AmyTV1;AmyE) 3.2.1.1 Thermoactinomyces vulgaris K94 CAA49465.1
CAZ78876.1
Q60051   1
Eukaryota
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 secreted protein   Achlya hypogyna ATCC 48635 AIG56379.1     1
 α-amylase (AmyAa) (fragment)   Aspergillus affinis ATCC MYA-4773 AFU52692.1     1
 α-amylase (Amyl III) 3.2.1.1 Aspergillus awamori KT-11 BAD06003.1
BAD06005.1
Q76L96   1
 α-amylase (Amyl I) 3.2.1.1 Aspergillus awamori KT-11 BAD06002.1 Q76L99   1
 alpha amylase   Aspergillus flavus APT42869.1     1
 alpha amylase   Aspergillus flavus APT42868.1     1
 α-amylase (Amy1;TAA) 3.2.1.1 Aspergillus flavus AAF14264.1
AAS89853.1
AAS89854.1
AAS89855.1
AAS89856.1
AAS89857.1
AAS89858.1
AAS89859.1
AAS89860.1
AAS89861.1
AAS89862.1
AAS89863.1
AAS89864.1
AAS89865.1
AAS89866.1
AAS89867.1
AAS89868.1
AAS89869.1
AAS89870.1
AAS89871.1
AAS89872.1
AAS89873.1
AAS89874.1
AAS89875.1
AAS89876.1
AAS89877.1
AAS89878.1
AAS89879.1
AAS89880.1
AAS89881.1
AAS89882.1
AAS89883.1
AAS89884.1
AAS89885.1
AAS89886.1
AAS89887.1
AAS89888.1
AAS89889.1
AAS89890.1
AAS89891.1
AAS89892.1
Q7LV45
Q96TH4
  1
 Afu4g10130   Aspergillus fumigatus Af293 XP_751813.1 Q4WPQ9   1
 α-amylase (AmyA) 3.2.1.1 Aspergillus kawachii IFO 4308 BAD01051.1 Q76CT3   1
 α-amylase (AsaA) 3.2.1.1 Aspergillus kawachii IFO 4308 BAA22993.1
CAX51628.1
O13296   1
 AN4507.2 (AmyC) (fragment)   Aspergillus nidulans FGSC A4 EAA60850.1 C8V8C6
Q5B4M3
  1
 AN3308.2 (AmyD)   Aspergillus nidulans FGSC A4 EAA63276.1 C8VHZ3
Q5B822
  1
 AN6324.2 (AmyE)   Aspergillus nidulans FGSC A4 EAA58708.1 C8V166
Q5AZF6
  1
 AN3388.2 (AmyF)   Aspergillus nidulans FGSC A4 EAA63356.1 C8VHN4
Q5B7U2
  1
 α-amylase (AmyA;AN2018.2) 3.2.1.1 Aspergillus nidulans FGSC A4 EAA64850.1
AAF17103.1
C8VLE6
G5EB45
  1
 α-amylase (AmyB;AN3402.2) 3.2.1.1 Aspergillus nidulans FGSC A4 AAF17100.1
EAA63370.1
C8VHL8
G5EAT0
Q9UV09
  1
 α-amylase, partial   Aspergillus niger AMX73966.1     1
 α-amylase (partial) 3.2.1.1 Aspergillus niger   P56271 2AAA[A] 1
 α-amylase A / B (AmyA;AmyB;An05g02100) 3.2.1.1 Aspergillus niger CBS 513.88 CAK44871.1
CAK46324.1
CAL33800.1
A2QL05
A2QL05
2GUY[A]
2GVY[A,B]
1
 acid α-amylase (AamA;An11g03340) 3.2.1.1 Aspergillus niger CBS 513.88 CAL15439.1
A35282
ADX42122.1
CAK48325.1
CAO78410.1
CAX51630.1
A2QW02   1
 An04g06930 (AmyC)   Aspergillus niger CBS 513.88 CAK44693.1 A2QJF8   1
 cell-wall 4-α-glucanotransferase (AgtA;An09g03100) 2.4.1.25 Aspergillus niger CBS 513.88 CAK40249.1 A2QTS4   1
 4-α-glucanotransferase (AgtB;An12g02460) 2.4.1.25 Aspergillus niger CBS 513.88 CAK41088.1 A2QYT9   1
 4-α-glucanotransferase (AgtC;An15g07800)   Aspergillus niger CBS 513.88 CAK42667.1 A2R6F9   1
 rutin α-L-rhamnosidase (RhaR)   Aspergillus niger DLFCC-90 ABW81206.1     1
 α-amylase A (AmyA) 3.2.1.1 Aspergillus niger VAR. AWAMORI UVK143F CAA36966.1 Q02905   1
 α-amylase B (AmyB) 3.2.1.1 Aspergillus niger VAR. AWAMORI UVK143F CAA36967.1
CAL15437.1
CAL15438.1
CAT03384.1
Q02906   1
 unnamed protein product (partial)   Aspergillus oryzae CAT03380.1     1
 unnamed protein product (partial)   Aspergillus oryzae CAT03381.1     1
 unnamed protein product   Aspergillus oryzae CAT03382.1     1
 unnamed protein product   Aspergillus oryzae CAT03383.1     1
 Sequence from patent 3.2.1.1 Aspergillus oryzae AAE13949.1
AAE37103.1
AAN27447.1
    1
 dioscin α-L-rhamnosidase (RhaD)   Aspergillus oryzae DLFCC-38 ADK23803.1 D9J2M5   1
 ginsenoside-α-L-rhamnosidase (RhaG)   Aspergillus oryzae DLFCC-39 ABY71841.1 B0FZ76
P0C1B4
  1
 α-amylase (AmyB;TAA;Amy1;Amy2;Amy3;Asp o 21;Aspo21) 3.2.1.1 Aspergillus oryzae DSM63303 CAA31218.1
AAA32708.1
ACP34134.1
BAA00336.1
CAA31219.1
CAA31220.1
CAC40348.1
CAT03377.1
CAV35984.1
P0C1B3
P10529
2TAA[A]
3KWX[A]
6TAA[A]
7TAA[A]
1
 AO090003001498   Aspergillus oryzae RIB40 BAE58540.1 Q2UIS5   1
 α-amylase (Amy1;AmyI;Taα-G1;AO090023000944;AmyA;AmyB) 3.2.1.1 Aspergillus oryzae RIB40 BAE59434.1 P0C1B3 3VX0[A] 1
 AO090120000263 (fragment)   Aspergillus oryzae RIB40 BAE62865.1 Q2U6F0   1
 α-amylase (Amy2;AmyII;Taα-G2;AO090120000196;AmyA;AmyB) 3.2.1.1 Aspergillus oryzae RIB40 BAE62808.1 P0C1B3   1
 α-amylase (Amy3;AmyIII;Taα-G3;AO090003001210;AmyA) 3.2.1.1 Aspergillus oryzae RIB40 BAA95703.1 P0C1B4   1
 α-amylase (Amy) 3.2.1.1 Aspergillus shirousami BAA01255.1 P30292   1
 α-amylase (TaaG1;AsTaaG1)   Aspergillus sojae KBN 1340 BAM28635.1     1
 α-amylase (AmyA) 3.2.1.1 Aspergillus tubingensis T8.4 AEB80431.1     1
 α-amylase   Aureobasidium pullulans NRRL Y-12974 AEH03024.1     1
 α-amylase   Aureobasidium pullulans P16 AOO85390.1     1
 α-amylase (AmyA)   Bispora sp. MEY-1 ADZ99364.1     1
 glycoside hydrolase family 13 protein (Bofut4_p008540.1)   Botrytis cinerea T4 CCD45137.1     1
 glycoside hydrolase family 13 protein (Bofut4_p114570.1)   Botrytis cinerea T4 CCD46751.1     1
 glycoside hydrolase family 13 protein (Bofut4_p035060.1)   Botrytis cinerea T4 CCD48213.1     1
 glycoside hydrolase family 13 protein (Bofut4_p108490.1)   Botrytis cinerea T4 CCD48465.1     1
 glycoside hydrolase family 13 protein (Bofut4_p018240.1)   Botrytis cinerea T4 CCD51518.1
CCD51518.2
    1
 CGB_B1340C   Cryptococcus gattii WM276 ADV20192.1     1
 CGB_E4540C   Cryptococcus gattii WM276 ADV22582.1     1
 CGB_J0550C   Cryptococcus gattii WM276 ADV24576.1     1
 CGB_K1010W   Cryptococcus gattii WM276 ADV25090.1     1
 CNAG_00122   Cryptococcus neoformans var. grubii H99 AFR92258.1     1
 CNAG_02189   Cryptococcus neoformans var. grubii H99 AFR95631.1     1
 CNAG_05264   Cryptococcus neoformans var. grubii H99 AFR94522.1
AGV14255.1
    1
 CNAG_01940   Cryptococcus neoformans var. grubii H99 AFR98135.1
AGV14739.1
    1
 CNL03660   Cryptococcus neoformans var. neoformans JEC21 AAW46412.1 Q5K924   1
 CNK02760   Cryptococcus neoformans var. neoformans JEC21 AAW46356.1 Q5K993   1
 CNH03660   Cryptococcus neoformans var. neoformans JEC21 AAW45221.1 Q5K924   1
 CNA01120   Cryptococcus neoformans var. neoformans JEC21 AAW41268.1 Q5KPY6   1
 CNE03480   Cryptococcus neoformans var. neoformans JEC21 AAW43607.1 Q5KGI6   1
 α-amylase (Amy-CS2) 3.2.1.1 Cryptococcus sp. S-2 BAA12010.1
BAA12011.1
Q92394   1
 DDB_0214924 (AmyA)   Dictyostelium discoideum AX4 XP_640516.1     1
 α-amylase (Amy;EfAmy)   Euplotes focardii AGU13046.1     1
 ORF   Flammulina velutipes KACC 42777 ADX07284.1     1
 α-amylase (fragment)   Flammulina velutipes L11 AOC97457.1     1
 α-amylase (fragment)   Flammulina velutipes L11 AOC97455.1     1
 α-amylase   Flammulina velutipes L11 AOC97456.1     1
 FFUJ_11362   Fusarium fujikuroi IMI 58289 CCT75344.1     1
 unnamed protein product   Fusarium graminearum PH-1 CEF78721.1     1
 α-amylase 1   Fusarium verticillioides AAZ73168.1 Q3YBZ7   1
 α-amylase (AmyA) 3.2.1.1 Fusicoccum sp. BCC4124 ABG48762.1 Q0Z8K1   1
 ORF   Leptosphaeria maculans JN3 v23.1.3 CBX99032.1 E5A5Y7   1
 LRAMOSA04807   Lichtheimia ramosa CDS12621.1     1
 LRAMOSA09602   Lichtheimia ramosa CDS07079.1     1
 α-amylase (LKA2) 3.2.1.1 Lipomyces kononenkoae SPENCER-MARTINSIAE IGC4052B AAO12212.1 Q8J1E4   1
 α-amylase (Lka1) 3.2.1.1 Lipomyces spencermartinsiae IGC4052B AAC49622.1 Q01117   1
 α-amylase 3.2.1.1 Lipomyces starkeyi KSM 22M AAN75021.1 Q6YF33   1
 MG09640.4   Magnaporthe oryzae 70-15 XP_364795.1 G5EHA8
Q2KHC0
  1
 MG10209.4   Magnaporthe oryzae 70-15 XP_365989.1 Q2KEQ7   1
 MGG_12595   Magnaporthe oryzae 70-15 XP_003720977.1
XP_366696.1
Q2KG13   1
 α-amylase (AmyA;McAmyA) 3.2.1.1 Malbranchea cinnamomea AFD54462.1   3VM7[A] 1
 α-amylase-like (fragment)   Mastigamoeba balamuthi ABD46606.1 Q27ST2   1
 α-amylase (Amy;EcAmy)   Moneuplotes crassus AGU13047.1     1
 NCU09805   Neurospora crassa OR74A EAA34829.1
XP_330455.1
    1
 NCU08131.1   Neurospora crassa OR74A XP_328837.1 Q7S4K0   1
 ORF (fragment)   Nyctotherus ovalis CAI59813.1     1
 α-amylase (AmyI;Amy1) 3.2.1.1 Ophiostoma floccosum ABF72529.1
ABF72530.1
ABF72531.1
Q06SN2   1
 PDE_01201 (Amy13A) 3.2.1.1 Penicillium oxalicum 114-2 EPS26265.1     1
 Pc12g06430   Penicillium rubens Wisconsin 54-1255 CAP80270.1 B6H0D9   1
 Pc16g06140   Penicillium rubens Wisconsin 54-1255 CAP93284.1 B6H8T0   1
 Pc21g10550   Penicillium rubens Wisconsin 54-1255 CAP95952.1 B6HIZ0   1
 Pc16g00630   Penicillium rubens Wisconsin 54-1255 CAP92733.1 B6H6W6   1
 Pc22g12340   Penicillium rubens Wisconsin 54-1255 CAP98522.1 B6HRH6   1
 α-amylase   Penicillium sp. 3-5 AIF73124.1     1
 α-amylase (Amy1) 3.2.1.1 Phanerochaete chrysosporium BKM-F-1767 / ATCC 24725 ABO42285.1 A5Y589   1
 α-amylase (Pnamy3)   Pholiota microspora BAW15173.1     1
 ORF (fragment)   Physarum polycephalum ABD46585.1 Q27SM4   1
 α-amylase 3.2.1.1 Pichia burtonii 15-1 BAF98616.1 A9ZPM0   1
 unnamed protein product   Podospora anserina S mat+ CAP61822.1
CDP28898.1
B2AEF6   1
 Pa_1_12690   Podospora anserina S mat+ CAP69613.1
CDP23629.1
B2AYY9   1
 α-amylase   Pseudogymnoascus pannorum AMR43301.1     1
 α-amylase   Pseudogymnoascus pannorum AMR43301.1     1
 α-amylase (A1)   Pseudogymnoascus pannorum R1-2 AHN65135.1     1
 α-amylase (A2)   Pseudogymnoascus pannorum R1-2 AHN65136.1     1
 maltotrise-forming α-amylase   Rasamsonia emersonii ALG76587.1     1
 α-amylase Amy13A   Rasamsonia emersonii JCM23024 AMQ75909.1     1
 α-amylase (RA) 3.2.1.1 Rhizomucor pusillus CAH04003.1
CAX51637.1
    1
 α-amylase (Amy;RpAmy) 3.2.1.1 Rhizomucor pusillus GX-3 AGJ52081.1     1
 α-amylase (Amy;RoAmy) 3.2.1.1 Rhizopus oryzae CICIM F0071 ADL28123.1 E2G4G0   1
 α-amylase   Rhizopus oryzae NRRL 2871 APW78050.1     1
 α-amylase (Alp1) 3.2.1.1 Saccharomycopsis fibuligera CAA29233.1
ADU24597.1
P21567   1
 α-amylase (SfAmy KZ) 3.2.1.1 Saccharomycopsis fibuligera KZ ADD80242.1 D4P4Y7   1
 α-amylase (Amy1) 3.2.1.1 Saitozyma flava ABS76467.1 A7LGW4   1
 SPAC27E2.01   Schizosaccharomyces pombe 972h- CAB11675.1
NP_594401.1
O13996   1
 SPAC4A8.01 (Meu30) 3.2.1.1 Schizosaccharomyces pombe 972h- CAB11471.1
BAB60880.1
CAD62442.2
O14154   1
 SPAC23D3.14c (Aah2)   Schizosaccharomyces pombe 972h- CAA91249.1
NP_594551.1
Q09840   1
 SPBC16A3.13 (Meu7;Aah4)   Schizosaccharomyces pombe 972h- CAA16864.1
NP_596776.1
O42918   1
 SPBC16A3.13 (Meu7;Aah4)   Schizosaccharomyces pombe 972h- CAA16864.1
NP_596776.1
O42918   1
 cell-wall active enzyme (Aah3;SPCC63.02c) 2.4.1.- Schizosaccharomyces pombe 972h- CAB40006.1
NP_587976.1
Q9Y7S9   1
 SPCC757.12 (Aah1)   Schizosaccharomyces pombe 972h- NP_587687.1
CAA21237.1
O74922   1
 SPCC11E10.09c (SPCC188.01C)   Schizosaccharomyces pombe 972h- CAB57851.1
CAB41221.1
NP_588205.1
Q10427
Q10427
  1
 α-amylase (Amy1;Amy) 3.2.1.1 Schwanniomyces occidentalis ATCC 26077 CAA34162.1
AAB22383.2
P19269   1
 α-amylase (Swa2) 3.2.1.1 Schwanniomyces occidentalis ATCC 26077 CAA51912.1 Q08806   1
 α-amylase (Amy)   Schwanniomyces occidentalis CCRC 21164 CAA43995.1
AAB21151.2
P19269   1
 α-amylase   Schwanniomyces occidentalis DSMZ 3451 ADQ44918.1 E5KJ07   1
 α-amylase (Amy54;Amy43) 3.2.1.1
3.2.1.116
Sclerotinia sclerotiorum ACN82436.1 C0LW29   1
 sscle_01g006130   Sclerotinia sclerotiorum 1980 UF-70 APA05843.1     1
 sscle_03g028610   Sclerotinia sclerotiorum 1980 UF-70 APA08091.1     1
 sscle_07g056970   Sclerotinia sclerotiorum 1980 UF-70 APA10927.1     1
 sscle_15g102910   Sclerotinia sclerotiorum 1980 UF-70 APA15521.1     1
 sscle_09g069180   Sclerotinia sclerotiorum 1980 UF-70 APA12148.1     1
 PIIN_06956   Serendipita indica DSM 11827 CCA73001.1     1
 Amy13A   Talaromyces leycettanus ASA45799.1     1
 TTHERM_00411610   Tetrahymena thermophila SB210 EAS00610.1     1
 α-amylase 3.2.1.1 Thermomyces lanuginosus CAA03110.1
CAA03111.1
    1
 MYCTH_2305783   Thermothelomyces thermophila ATCC 42464 AEO58446.1     1
 MYCTH_77082   Thermothelomyces thermophila ATCC 42464 AEO54195.1     1
 THITE_152693   Thielavia terrestris NRRL 8126 AEO65810.1     1
 secreted protein   Thraustotheca clavata ATCC 34112 AIG55646.1     1
 secreted protein   Thraustotheca clavata ATCC 34112 AIG55673.1     1
 α-amylase (TRa2) 3.2.1.1 Trichoderma viride IAM 5141 / JCM22452 BAG69580.1 B5BQC3   1
 UBRO_17009 (fragment)   Ustilago bromivora UB2112 SAM72527.1     1
 α-amylase 3.2.1.1 Valsaria rubricosa CBS 848.96 CAJ21046.1
CAJ21047.1
    1
 glycoside hydrolase family 13 protein   Xanthophyllomyces dendrorhous CED83452.1     1
 glycoside hydrolase family 13 protein   Xanthophyllomyces dendrorhous CED82279.1     1
 glycoside hydrolase family 13 protein   Xanthophyllomyces dendrorhous CED84418.1     1
 α-amylase (Amy1)   Xanthophyllomyces dendrorhous UCD 67-385 AOR81607.1     1
 ZT1A5_G524   Zymoseptoria tritici ST99CH_1A5 SMY19089.1     1
 ZT1A5_G4033   Zymoseptoria tritici ST99CH_1A5 SMY22593.1     1
 ZT1A5_G7348   Zymoseptoria tritici ST99CH_1A5 SMY25906.1     1
 ZT3D7_G4042   Zymoseptoria tritici ST99CH_3D7 SMQ48892.1     1
 ZT3D7_G528   Zymoseptoria tritici ST99CH_3D7 SMQ45384.1     1
 ZT3D7_G7413 (fragment)   Zymoseptoria tritici ST99CH_3D7 SMQ52260.1     1
unclassified
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Sequence 7 from patent US 6642044   unidentified AAR76032.1
ABJ43097.1
ABN29371.1
    1
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