Polysaccharide Lyase Family 39

Mechanism b-elimination
3D Structure Status( α / α ) 6 toroid + anti-parallel β-sheet
NoteFamily created after Ji et al., 2019 [PMID=31624143] who have shown that the alginate lyase activity of the Dp0100 protein in Defluviitalea phaphyphila Alg1; distantly related to several other PL families
External resourcesCAZypedia;
Statistics GenBank accession (29); Uniprot accession (1); PDB accession (3); 3D entries (1); cryst (0)
Activity IdEC#Activity NameResidue -2Bond -1Residue -1 Reacting BondResidue +1Bond +1Residue +2Reactant
L358 4.2.2.3 endo-b-D-mannuronate-alginate lyase bDManpA 1,4 bDManpA 1,4 bDManpA 1,4 bDManpA
L365 4.2.2.11 guluronate-specific alginate lyase aLGulpA 1,4 aLGulpA 1,4 aLGulpA 1,4 aLGulpA
L384 4.2.2.- endo-polyMG-alginate lyase aLGulpA 1,4 bDManpA 1,4 aLGulpA 1,4 bDManpA
L385 4.2.2.- endo-polyGM-alginate lyase bDManpA 1,4 aLGulpA 1,4 bDManpA 1,4 aLGulpA
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