| Mechanism | b-elimination |
|---|---|
| 3D Structure Status | ( α / α ) 6 toroid + anti-parallel β-sheet |
| Note | The endo-chondroitin lyase activity of the Victivallis vadensis ATCC BAA-548 protein was shown by Helbert in al., PNAS (2019) [PMID=30850540] |
| External resources | CAZypedia; |
| Statistics | GenBank accession (575); Uniprot accession (0); PDB accession (2); 3D entries (2); cryst (0) |
| Bacteria | ||||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | ||||
| chondroitin lyase / chondroitinase / glycosamineglycan lyase VII (GAGase VII; DXK01_010245) | 4.2.2.- | pubmed |
Bacteroides intestinalis APC919/174 | QDO69279.1 | 8KHW[A] | |||||
| chondroitin lyase / chondroitinase / glycosamineglycan lyase VIII (GAGase VIII; C4H11_12355) | 4.2.2.- | pubmed |
Bacteroides zoogleoformans ATCC 33285 | AVM53611.1 | ||||||
| chondroitin lyase / chondroitinase / glycosamineglycan lyase III (GAGase III; H7Z75_16890) | 4.2.2.- | pubmed |
Cytophagales bacterium | MBC7922758.1 | ||||||
| hyaluronate lyase / glycosamineglycan lyase VI (GAGase VI; HMPREF9151_02550) | 4.2.2.1 | pubmed |
Hoylesella saccharolytica F0055 | EKX96148.1 | ||||||
| chondroitin lyase / chondroitinase / glycosamineglycan lyase V (GAGase V;DHV48_09530) | 4.2.2.- | pubmed |
Prolixibacteraceae bacterium | HCY41582.1 | ||||||
| chondroitin lyase / chondroitinase / glycosamineglycan lyase IV (GAGase IV; GBK04_22705) | 4.2.2.- | pubmed |
Salmonirosea aquatica SJW1-29 | MPR36080.1 | ||||||
| broad specificity glycosamineglycan lyase II (GAGase II; SAMN06269250_2316) | 4.2.2.1 4.2.2.8 4.2.2.- |
pubmed pubmed pubmed |
Spirosoma fluviale DSM 29961 | SOD82962.1 | 8KHV[A] | |||||
| broad specificity glycosamineglycan lyase I (GAGase I; Slin_2455) | 4.2.2.1 4.2.2.8 4.2.2.- |
pubmed pubmed pubmed |
Spirosoma linguale DSM 74 | ADB38475.1 | ||||||
| endo-chondroitin lyase (Vvad_PD2953) | 4.2.2.- | pubmed |
Victivallis vadensis | WP_116885688.1 ZP_06241351.1 |
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