| Mechanism | Inverting e |
|---|---|
| Clan | GH-F |
| 3D Structure Status | 5-fold β-propeller |
| Catalytic Nucleophile/Base | Asp |
| Catalytic Proton Donor | Glu |
| Note | Many members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713). |
| External resources | CAZypedia; |
| Commercial Enzyme Provider(s) | MEGAZYME; NZYTech; PROZOMIX; |
| Statistics | GenBank accession (487); Uniprot accession (13); PDB accession (15); 3D entries (6); cryst (0) |
| Bacteria | ||||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |||
| endo-α-1,5-L-arabinanase (BlAbn1; BLi03029; BL00353) | 3.2.1.99 | pubmed |
Bacillus licheniformis DSM 13 = ATCC 14580 | AAU41895.1 AAU24536.1 |
Q65GB9 | 6B7K[A,B,C,D] | 5 | |||
| endo-α-1,5-L-arabinanase (AbnA; BLABNase; BLi01295; BL02653) | 3.2.1.99 | pubmed |
Bacillus licheniformis DSM 13 = ATCC 14580 | AAU40201.1 AAU22854.1 AAU22854.2 |
Q65L63 | 5 | ||||
| endo-α-1,5-L-arabinanase / protopectinase C (PPase-C) | 3.2.1.99 | pubmed |
Bacillus subtilis IFO3134 | BAA20372.1 | O07078 | 5 | ||||
| endo-α-1,5-L-arabinanase (AbnA; BSU28810) (Arb43A) | 3.2.1.99 | pubmed |
Bacillus subtilis subsp. subtilis str. 168 | CAA99586.1 AAV87172.1 AIY94210.1 AQR82908.1 AQR87123.1 CAB14841.1 CAB14841.2 NP_390759.1 |
A0A6M3ZJV7 P94522 |
1UV4[A] | 5 | |||
| endo-α-1,5-L-arabinanase / exo-α-1,5-L-arabinanase 43A (ArbA; CJA_0805) (Arb43A) | 3.2.1.99 3.2.1.- |
pubmed pubmed |
Cellvibrio japonicus Ueda107 | ACE84667.1 CAA71485.1 |
B3PKP8 P95470 |
1GYD[B] 1GYE[B] 1GYH[A,B,C,D,E,F] |
5 | |||
| α-1,5-L-arabinanase (AbnB;HUS_CDS25) (intracellular) | 3.2.1.99 | pubmed |
Geobacillus stearothermophilus T-6 NCIMB 40222 | ACE73676.1 | B3EYM8 | 3CU9[A] 3D5Y[A] 3D5Z[A] 3D60[A] 3D61[A] 6F1G[A] |
5 | |||
| endo-α-1,5-L-arabinanase (Abn-ts) | 3.2.1.99 | pubmed |
Geobacillus thermodenitrificans TS-3 | BAB64339.1 | Q93HT9 | 1WL7[A] 6A8H[A] 6A8I[A,B] |
5 | |||
| endo-α-1,5-L-arabinanase (AbnZ1) | 3.2.1.99 | pubmed |
Paenibacillus polymyxa Z6 | AHA50062.1 | V5LER1 | 5 | ||||
| exo-α-1,5-L-arabinanase (Arn3;ARN3) | 3.2.1.- | pubmed |
uncultured bacterium | ADB43999.1 | D2XML8 | 4KCB[A,B] | 5 | |||
| Eukaryota | ||||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |||
| endo-α-1,5-L-arabinanase (Ara;PcARA) | 3.2.1.99 | pubmed |
Phanerochaete chrysosporium BKM-F-1767 | AFN42888.1 | I6XPK9 | 5 | ||||
| endo-1,5-α-L-arabinanase (RmArase) | 3.2.1.99 | pubmed |
Rhizomucor miehei CAU432 | AHF50152.1 | A0A0C4JZB0 | 5 | ||||
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