| Mechanism | Inverting e |
|---|---|
| Clan | GH-F |
| 3D Structure Status | 5-fold β-propeller |
| Catalytic Nucleophile/Base | Asp |
| Catalytic Proton Donor | Glu |
| Note | Many members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713). |
| External resources | CAZypedia; |
| Commercial Enzyme Provider(s) | MEGAZYME; NZYTech; PROZOMIX; |
| Statistics | GenBank accession (1351); Uniprot accession (17); PDB accession (8); 3D entries (4); cryst (0) |
| Bacteria | ||||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |||
| arabinan exo-α-1,5-L-arabinofuranosidase 43B (Abf1; BflsABF43B) | 3.2.1.- | pubmed |
Bifidobacterium longum subsp. suis DSM 20211 | WP_007055573.1 | A0A087B9Y3 A0A4R0T0X6 A0AA87IF47 |
26 | ||||
| exo-α-1,5-L-arabinofuranosidase 43K (CJA_3012) (Abf43K) | 3.2.1.- | pubmed |
Cellvibrio japonicus Ueda107 | ACE82749.1 | B3PD54 | 26 | ||||
| exo-α-1,5-L-arabinofuranosidase 43L (CJA_0806) (Abf43L) | 3.2.1.- | pubmed |
Cellvibrio japonicus Ueda107 | ACE84379.1 | B3PKP9 | 26 | ||||
| α-1,5-L-arabinofuranosidase (Abf3) | 3.2.1.- | pubmed |
Levilactobacillus brevis ATCC 14869 = DSM 20054 | AGT14430.1 | U2QSL8 | 26 | ||||
| α-L-arabinofuranosidase II (Araf43;LbAraf43;N624_1993) | 3.2.1.- | pubmed |
Levilactobacillus brevis DSM 1269 / TMW 1.313 | APU52333.1 KIO95879.1 |
A0A5B7Y0Z3 | 5M8B[A,B] | 26 | |||
| exo-α-1,5-L-arabinofuranosidase 43A (SaAraf43A; SAV1043) (Araf43A) | 3.2.1.- | pubmed |
Streptomyces avermitilis MA-4680 = NBRC 14893 | BAC68753.1 NP_822218.1 |
Q82P90 | 3AKF[A] 3AKG[A] 3AKH[A] 3AKI[A] |
26 | |||
| exo-α-1,5-L-arabinofuranosidase II (AFase II) | 3.2.1.- | pubmed |
Streptomyces chartreusis GS901 | BAA90772.1 B59296 |
P82594 | 26 | ||||
| α-L-arabinofuranosidase (Araf43;WAraf43) | 3.2.1.- | pubmed |
Weissella sp. 142 | APU52332.1 | A0A0D1M7L2 A0A1L7HA00 |
5M8E[A,B] | 26 | |||
| exo-α-L-arabinofuranosidase (MC60GH43) | 3.2.1.- | pubmed |
Xylanivirga thermophila | UKG18725.1 | 26 | |||||
| exo-α-L-arabinofuranosidase (MC68GH43-2) | 3.2.1.- | pubmed |
Xylanivirga thermophila | UKG18728.1 | 26 | |||||
| Eukaryota | ||||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |||
| α-L-arabinofuranosidase (Ara;CsAra) | 3.2.1.55 | doi |
Chaetomium sp. CQ31 | AFU88757.1 | K7QK60 | 26 | ||||
| α-L-arabinofuranosidase (Abn4) | 3.2.1.- | doi |
Chrysosporium lucknowense C1 | ADZ98860.1 | F2X2F6 | 26 | ||||
| α-L-arabinofuranosidase (Abf43;HiAbf43) | 3.2.1.55 | pubmed |
Humicola insolens Y1 | AIM56896.1 | A0A0F6NRE2 | 26 | ||||
| single-substituted arabinan-specific α-L-arabinofuranosidase (PcAbf43A;Pc06g00650) (Abf43A) | 3.2.1.55 | pubmed |
Penicillium chrysogenum 31B | BAM73651.1 | L0N6Q8 | 26 | ||||
| α-L-arabinofuranosidase B (AbfB;MoAbfB;MG06843;MGG_06843( | 3.2.1.55 | pubmed |
Pyricularia oryzae 70-15 | XP_370346.1 | G4MMH2 | 26 | ||||
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