Glycoside Hydrolase Family 36

Mechanism Retaining a
ClanGH-D
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorAsp (experimental)
NoteMechanistic commonality with family GH27 demonstrated by Comfort et al. (2007) Biochemistry, 46: 3319-3330 (PMID: 17323919)
External resourcesCAZypedia;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (17238); Uniprot accession (110); PDB accession (45); 3D entries (12); cryst (0)
Bacteria
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 A4V09_19485   Blautia pseudococcoides YL58 ANU77732.1  
8K1A[A,B,C,D] 3.28
8K7U[A,B,C,D] 3.37
8K7V[A,B,C,D] 3.17
 α-galactosaminidase specific to de-N-acetylated α-galactosaminides (FpGalNase; A4U99_12085) 3.2.1.-
3.2.1.-
Flavonifractor plautii YL31 ANU41754.1
QQR05374.1
UQA26184.1
WP_044942952.1
A0A096B2Z8
A0A1C7FP14
A0AAX1KHI8
P0DTR5
8X1B[A] 2.59
9AWT[A,B,C,D,E]
9AY8[A,B,C,D,E] 2.00
9AYU[A,B,C,D,E] 2.00
 α-galactosidase (AgaB;AgaB1) 3.2.1.22 Geobacillus stearothermophilus KVE39 AAG49421.1 Q934H7
4FNQ[A] 1.80
 α-galactosidase (AgaA;GsAgaA;Aga1) 3.2.1.22 Geobacillus stearothermophilus KVE39 AAG49420.1 Q9ALJ4
4FNP[A,B,C,D] 2.80
4FNR[A,B,C,D] 3.20
4FNS[A,B,C,D] <carb_like_DGJ>
2.60
4FNT[A,B,C,D] α-D-Galp-(1-6)-α-D-Glcp-(1-2)-β-D-Fruf
2.60
4FNU[A,B,C,D] α-D-Galp-(1-6)-α-D-Galp-(1-6)-α-D-Glcp-(1-2)-β-D-Fruf
3.60
 α-galactosidase (MelA; Aga; LBA1438) 3.2.1.22 Lactobacillus acidophilus NCFM AAO21867.1
AAV43263.1
ACK31409.1
G1UB44
Q7WWP9
2XN0[A,B] 2.50
2XN1[A,B,C,D] 2.30
2XN2[A] α-D-Galp
1.58
 LVIS_1758 (LbR11)   Levilactobacillus brevis ATCC 367 ABJ64825.1  
3MI6[A,B,C,D] 2.70
 α-galactosidase / sucrose kinase (AgaSK; RgAgaSK; RUGNEv3_61222) 3.2.1.22 Mediterraneibacter gnavus E1 CCA61959.1 G4T4R7
2YFN[A] 1.45
2YFO[A] α-D-Galp
1.35
 α-galactosidase (SP1898) 3.2.1.22 Streptococcus pneumoniae TIGR4 AAK75969.1
NP_346329.1
A0A0H2URQ6
Q97NW1
6PHU[A] 2.20
6PHV[A] α-D-Galp
2.10
6PHW[A] α-D-Galp-(1-6)-α-D-Glcp
2.20
6PHX[A] α-D-Galp-(1-6)-α-D-Glcp-(1-2)-β-D-Fruf
2.00
6PHY[A] α-D-Galp-(1-3)-α-D-Galp
α-D-Galp-(1-3)-β-D-Galp
2.00
6PI0[A] α-D-Galp-(1-3)-β-D-Galp
2.09
 α-galactosidase (GalA;TmGalA;TmGal36A;Tm1192) (Gal36) 3.2.1.22 Thermotoga maritima MSB8 CAH68692.1
AAD36267.1
AAM56791.1
AGL50123.1
AHD18901.1
AKE28969.1
CAA04514.1
CAD29026.1
CAT81453.1
NP_228997.1
G4FEF4
O33835
1ZY9[A] 2.34
5M0X[A] 1.80
5M12[A] 1.53
5M16[A] 1.62
5M1I[A] 1.55
6GTA[A] 2.20
6GVD[A] 1.22
6GWF[A] 1.72
6GWG[A] 1.77
6GX8[A] 1.42
 α-galactosidase (TtGalA; TTHB115) 3.2.1.22 Thermus thermophilus HB8 BAD71911.1 Q53W51
6LCJ[A,B,C,D,E,F] 2.50
6LCK[A,B,C] α-D-Galp-(1-1)-<non_carb>
2.85
6LCL[A,C,E] α-D-Galp-(1-6)-D-1-deoxy-Galp
3.20
Eukaryota
Protein Name EC#OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
 raffinose exo-α-1,6-galactosidase (AtAkαGal3; At5g20250; DIN10) 3.2.1.-
2.4.1.67
Arabidopsis thaliana NP_851044.2
AAL90901.1
AAN18198.1
AED92818.1
AED92819.1
AED92820.1
AED92821.1
BAD93984.1
BAE99252.1
BAH19441.1
BAH19983.1
BAH57038.1
NP_197525.1
F4K470
Q8RX87
7EXF[A,B] β-D-Galp
2.17
7EXG[A,B] α-L-Arap
β-D-2-deoxy-Galp
2.05
7EXH[A,B] α-L-Talp-(1-1)-<non_carb>
2.63
7EXJ[A,B] 2.47
7EXQ[A,B] α-D-Glcp-(1-2)-β-D-Fruf
α-L-Allp
α-L-Gulp
2.20
7EXR[A,B] α-D-Galp-(1-6)-α-D-Galp-(1-6)-α-D-Glcp-(1-2)-β-D-Fruf
2.00
 α-galactosidase   Paecilomyces sp. thermophila J18 AWW14941.1  
6JHP[A,B,C,D] 2.56
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