Glycoside Hydrolase Family 13 / Subf 1

Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; PDB Molecule of the Month;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (2415); Uniprot accession (59); PDB accession (22); 3D entries (9); cryst (0)
Eukaryota
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3DSubf
 α-amylase (Amyl III) 3.2.1.1   Aspergillus awamori KT-11 BAD06003.1
BAD06005.1
Q76L96   1
 α-amylase (Amyl I) 3.2.1.1   Aspergillus awamori KT-11 BAD06002.1 Q76L99   1
 α-amylase (Amy1;TAA) 3.2.1.1   Aspergillus flavus AAF14264.1
AAS89853.1
AAS89854.1
AAS89855.1
AAS89856.1
AAS89857.1
AAS89858.1
AAS89859.1
AAS89860.1
AAS89861.1
AAS89862.1
AAS89863.1
AAS89864.1
AAS89865.1
AAS89866.1
AAS89867.1
AAS89868.1
AAS89869.1
AAS89870.1
AAS89871.1
AAS89872.1
AAS89873.1
AAS89874.1
AAS89875.1
AAS89876.1
AAS89877.1
AAS89878.1
AAS89879.1
AAS89880.1
AAS89881.1
AAS89882.1
AAS89883.1
AAS89884.1
AAS89885.1
AAS89886.1
AAS89887.1
AAS89888.1
AAS89889.1
AAS89890.1
AAS89891.1
AAS89892.1
Q5QHG8
Q5QHJ5
Q5QHK3
Q7LV45
Q96TH4
  1
 α-amylase (AmyA) 3.2.1.1   Aspergillus kawachii IFO 4308 BAD01051.1 Q76CT3   1
 α-amylase (AsaA) 3.2.1.1 doi
Aspergillus kawachii IFO 4308 BAA22993.1
CAX51628.1
O13296   1
 α-amylase (AmyA;AN2018.2) 3.2.1.1   Aspergillus nidulans FGSC A4 EAA64850.1
AAF17103.1
A0A1U8QLT9
C8VLE6
G5EB45
Q9UV07
  1
 α-amylase (AmyB;AN3402.2) 3.2.1.1   Aspergillus nidulans FGSC A4 AAF17100.1
EAA63370.1
A0A1U8QIQ3
C8VHL8
G5EAT0
Q9UV09
  1
 α-amylase (partial) 3.2.1.1 pubmed
Aspergillus niger   P56271 2AAA[A] 1
 α-amylase A / B (AmyA; AmyB; An05g02100) 3.2.1.1   Aspergillus niger CBS 513.88 CAK44871.1
CAK46324.1
CAL33800.1
A2QL05
A2QL05
P0C1B3
2GUY[A]
2GVY[A,B]
1
 acid α-amylase (AamA;An11g03340) 3.2.1.1   Aspergillus niger CBS 513.88 CAL15439.1
ADX42122.1
CAK48325.1
CAO78410.1
CAX51630.1
A2QW02
F1C3F8
  1
 cell-wall 4-α-glucanotransferase (AgtA;An09g03100) 2.4.1.25 pubmed
Aspergillus niger CBS 513.88 CAK40249.1 A2QTS4   1
 4-α-glucanotransferase (AgtB;An12g02460) 2.4.1.25   Aspergillus niger CBS 513.88 CAK41088.1 A2QYT9   1
 α-amylase A (AmyA) 3.2.1.1 pubmed
Aspergillus niger VAR. AWAMORI UVK143F CAA36966.1 Q02905   1
 α-amylase B (AmyB) 3.2.1.1 pubmed
Aspergillus niger VAR. AWAMORI UVK143F CAA36967.1
CAL15437.1
CAL15438.1
CAT03384.1
Q02906   1
 α-amylase (AmyB; TAA; Amy1; Amy2; Amy3; Asp o 21; Aspo21) 3.2.1.1 pubmed
Aspergillus oryzae DSM63303 CAA31218.1
AAA32708.1
ACP34134.1
BAA00336.1
CAA31219.1
CAA31220.1
CAC40348.1
CAT03377.1
CAV35984.1
A0A1S9DH83
B0FZ76
P0C1B3
P0C1B4
P10529
2TAA[A]
3KWX[A]
6TAA[A]
6YQ7[A,B]
6YQ9[AAA,BBB]
6YQA[AAA,BBB]
6YQB[AAA,BBB]
6YQC[AAA,BBB]
7P4W[A]
7TAA[A]
1
 α-amylase (Amy1; AmyI; Taα-G1; AO090023000944; AmyA; AmyB) 3.2.1.1 pubmed
Aspergillus oryzae RIB40 BAE59434.1 P0C1B3 3VX0[A]
3VX1[A]
1
 α-amylase (Amy2; AmyII; Taα-G2; AO090120000196; AmyA; AmyB) 3.2.1.1   Aspergillus oryzae RIB40 BAE62808.1 P0C1B3   1
 α-amylase (Amy3; AmyIII; Taα-G3; AO090003001210; AmyA) 3.2.1.1   Aspergillus oryzae RIB40 BAA95703.1 P0C1B3
P0C1B4
6XSJ[A,B]
6XSV[A]
1
 α-amylase (Amy) 3.2.1.1 pubmed
Aspergillus shirousami BAA01255.1 P30292   1
 α-amylase (AmyA) 3.2.1.1 pubmed
Aspergillus tubingensis T8.4 AEB80431.1 G9DA07   1
 α-amylase (CfAM) 3.2.1.1 pubmed
Cordyceps farinosa   A0A5S8WFA8 6SAU[B]
6SAU[A]
1
 α-amylase (Amy-CS2) 3.2.1.1 pubmed
Cryptococcus sp. S-2 BAA12010.1
BAA12011.1
Q92394   1
 α-amylase (AmyA) 3.2.1.1   Fusicoccum sp. BCC4124 ABG48762.1 Q0Z8K1   1
 α-amylase (LKA2) 3.2.1.1   Lipomyces kononenkoae SPENCER-MARTINSIAE IGC4052B AAO12212.1 Q8J1E4   1
 α-amylase (Lka1) 3.2.1.1 pubmed
Lipomyces spencermartinsiae IGC4052B AAC49622.1 Q01117   1
 α-amylase 3.2.1.1   Lipomyces starkeyi KSM 22M AAN75021.1 Q6YF33   1
 α-amylase (AmyA;McAmyA) 3.2.1.1   Malbranchea cinnamomea AFD54462.1 K9L8F3 3VM7[A] 1
 α-amylase (AmyI;Amy1) 3.2.1.1   Ophiostoma floccosum ABF72529.1
ABF72530.1
ABF72531.1
Q06SN1
Q06SN2
Q06SN3
  1
 α-amylase (PDE_01201) (Amy13A) 3.2.1.1 pubmed
Penicillium oxalicum 114-2 EPS26265.1 S7Z6T2   1
 α-amylase (PcAmy) 3.2.1.1 pubmed
Penicillium sp. 3-5 AIF73124.1 A0A075M165   1
 α-amylase (Amy1) 3.2.1.1   Phanerochaete chrysosporium BKM-F-1767 / ATCC 24725 ABO42285.1 A5Y589   1
 α-amylase 3.2.1.1   Pichia burtonii 15-1 BAF98616.1 A9ZPM0   1
 α-amylase (AmyA1) 3.2.1.1 pubmed
Pseudogymnoascus pannorum ( formerly Geomyces pannorum) AMR43301.1 A0A142I5C4   1
 α-amylase (RpAM) 3.2.1.1   Rhizomucor pusillus CAH04003.1
CAX51637.1
M9TI89 6SAV[A,B] 1
 α-amylase (Amy; RpAmy) 3.2.1.1 pubmed
Rhizomucor pusillus GX-3 AGJ52081.1 M9TI89   1
 α-amylase (Amy;RoAmy) 3.2.1.1   Rhizopus arrhizus CICIM F0071 ADL28123.1 E2G4G0   1
 α-amylase (Alp1; Sfamy) 3.2.1.1 pubmed
Saccharomycopsis fibuligera CAA29233.1
ADU24597.1
E7D897
P21567
  1
 α-amylase (SfAmy KZ) 3.2.1.1   Saccharomycopsis fibuligera KZ ADD80242.1 D4P4Y7   1
 α-amylase (Amy1) 3.2.1.1   Saitozyma flava ABS76467.1 A7LGW4   1
 α-amylase (Amy1;Amy) 3.2.1.1 pubmed
Schwanniomyces occidentalis ATCC 26077 CAA34162.1
AAB22383.2
P19269   1
 α-amylase (Swa2) 3.2.1.1 pubmed
Schwanniomyces occidentalis ATCC 26077 CAA51912.1 Q08806   1
 α-amylase (Amy54;Amy43) 3.2.1.1
3.2.1.116
  Sclerotinia sclerotiorum ACN82436.1 C0LW29   1
 α-amylase (TeAM) 3.2.1.1 pubmed
Thamnidium elegans   A0A5S8WFA7 6SAO[A] 1
 α-amylase 3.2.1.1 doi
Thermomyces lanuginosus CAA03110.1
CAA03111.1
    1
 α-amylase (TRa2) 3.2.1.1 pubmed
Trichoderma viride IAM 5141 / JCM22452 BAG69580.1 B5BQC3   1
 α-amylase (ORF17588; NFAmy13A) 3.2.1.1 pubmed
uncultured Aspergillus AVI31080.1 A0A2P1ANM2   1
 α-amylase 3.2.1.1   Valsaria rubricosa CBS 848.96 CAJ21046.1
CAJ21047.1
    1
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