Polysaccharide Lyase Family 9

Activities in Familypectate lyase (EC 4.2.2.2); exopolygalacturonate lyase (EC 4.2.2.9); thiopeptidoglycan lyase (EC 4.2.2.-); rhamnogalacturonan endolyase (EC 4.2.2.23)
Mechanism b-elimination
3D Structure Statusparallel β-helix
External resourcesCAZypedia;
Commercial Enzyme Provider(s)PROZOMIX;
Statistics GenBank accession (3037); Uniprot accession (14); PDB accession (4); 3D entries (2); cryst (0)
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3D Subf
 pectate lyase H (Pel-15H;Pel15H) 4.2.2.2 pubmed
Bacillus sp. KSM-P15 BAA81753.1 Q9XDT1   1
 rhamnogalacturonan lyase (BT4170;BT_4170) 4.2.2.23 pubmed
Bacteroides thetaiotaomicron VPI-5482 AAO79275.1
NP_813081.1
Q8A051 5OLQ[A,B,C]
5OLR[A,B,C]
5OLS[A]
1
 rhamnogalacturonan lyase (BT4183;BT_4183) 4.2.2.23 pubmed
Bacteroides thetaiotaomicron VPI-5482 AAO79288.1
NP_813094.1
Q8A038   1
 pectate lyase A (PelA) 4.2.2.2 pubmed
Clostridium cellulovorans AAG59609.1 Q9AQF3   1
 exopolygalacturonate lyase (PelX) 4.2.2.9 pubmed
Dickeya chrysanthemi EC16 AAA24850.1 P22751   1
 pectate lyase (PelL) 4.2.2.2 pubmed
Dickeya chrysanthemi EC16 AAA99476.1 P0C1A6   1
 pectate lyase (PelL1) 4.2.2.2 pubmed
Dickeya chrysanthemi PY35 AAF05308.1 Q9RP65   1
 exo-polygalacturonate lyase (PelX;Dda3937_00143) 4.2.2.9 pubmed
Dickeya dadantii 3937 CAB39324.1
ADN00761.1
E0SDR9
Q9Z5P8
  1
 pectate lyase L (PelL;Dda3937_02794) (Pel9A) 4.2.2.2 pubmed
Dickeya dadantii 3937 ADM99100.1
CAA57041.1
P0C1A7
Q47473
1RU4[A] 1
 thiopeptidoglycan lyase (DssA) 4.2.2.- pubmed
Paenibacillus koleovorans JCM 11186 BAB92974.2
BAB92974.1
Q8KKH8   4
 pectate lyase (PpPel9a,PPSC2_c5233) 4.2.2.2 pubmed
Paenibacillus polymyxa SC2 ADO59170.1 E3E7F9   1
 pectate lyase 9A (Pel9A) 4.2.2.2 pubmed
Thermoclostridium stercorarium F-9 BAC87940.1 Q76EC9   1
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