Activities in Sub Family	Alginate lyase (EC 4.2.2.-); Oligo-α-L-guluronate lyase / exo-acting α-L-guluronan lyase (EC 4.2.2.-); Poly-(MG)-lyase / MG-specific alginate lyase (EC 4.2.2.-); Poly(α-L-guluronate) lyase / G-specific alginate lyase (EC 4.2.2.11); Oligoalginate lyase / exo-alginate lyase (EC 4.2.2.26); Poly(β-mannuronate) lyase / M-specific alginate lyase (EC 4.2.2.3);
Mechanism	b-elimination
3D Structure Status	parallel β-helix
External resources	CAZypedia;
Statistics	GenBank accession (1); Uniprot accession (15); PDB accession (7); 3D entries (4); cryst (0)

Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D Carbohydrate Ligands Resolution (Å)	Subf
poly-(G/MG)-specific exo-alginate lyase (BcAlyPL6)	4.2.2.-	Bacteroides clarus YIT 12056	WP_009122077.1	A0A1Y4JW59 F3PIZ9	7DMK[A,B,C,D] 2.21	1
exo-alginate lyase (polyG-specific) (AlyGC)	4.2.2.-	Paraglaciecola chathamensis S18K6T	WP_007984897.1	A0A1S4NYD7 A0A1S4NYD8 A0A656LHA2	5GKD[A,B,C,D] 2.19 5GKQ[A,B] β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA-(1-4)-β-D-ManpA 2.57	1
poly(α-L-guluronate) lyase / G-specific alginate lyase (Patl_3640)	4.2.2.11	Pseudoalteromonas atlantica T6c	ABG42142.1	Q15PP6	7O77[A] 2.32 7O7T[A] 2.05	1
alginate lyase (Pedsa_0632)	4.2.2.11 4.2.2.- 4.2.2.-	Pseudopedobacter saltans DSM 12145	ADY51208.1	F0S7Y7	7O7A[A,B] 1.99 7O84[A,B] β-D-4-deoxy-ManpA-(1-4)-α-L-GulpA-(1-4)-α-L-GulpA β-D-4-deoxy-ManpA-(1-4)-α-L-GulpA-(1-4)-α-L-GulpA-(1-4)-α-L-GulpA 2.18	1
Top

Last update: 2024-04-23 © Copyright 1998-2024
AFMB - CNRS - Université d'Aix-Marseille