Polysaccharide Lyase Family 26

Activities in FamilyRhamnogalacturonan exolyase (EC 4.2.2.24);
Mechanism b-elimination
3D Structure Status( α / α ) 6 barrel
NoteThe activity of the Penicillium chrysogenum exo-rhamnogalacturonan lyase has been experimentally demonstrated (Iwai et al., Appl. Microbiol. Biotechnol. 99, 8515-8525 (2015) [PMID=25921806]. No subfamily could be detected [PMID:] but a small group of distant Bacteroidetes members, including the Pedobacter sp. PACM 27299 protein AQ505_08320
Statistics GenBank accession (1153); Uniprot accession (2); PDB accession (4); 3D entries (1); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 RFN52_07220   Streptomyces collinus CGMCC 4.1623 WMX63142.1    
 QU709_36025   Streptomyces coralus SX92 WLW56432.1    
 EJ357_08470   Streptomyces cyaneochromogenes MK-45 AZQ33485.1    
 TU94_06350   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP01148.1    
 N8I84_08365   Streptomyces cynarae HUAS 13-4 UXY18737.1    
 BN159_7051   Streptomyces davaonensis JCM 4913 CCK31430.1    
 L3078_08705   Streptomyces deccanensis KCTC 19241 ULR49365.1    
 M4V62_37440   Streptomyces durmitorensis MS405 UQT60295.1    
 PS783_07470   Streptomyces enissocaesilis NBF 715 WDI17433.1    
 IM697_14980   Streptomyces ferrugineus CCTCC AA2014009 QOV39574.1    
 CNQ36_06200   Streptomyces fungicidicus TXX3120 AYL35060.1    
 CP966_06040   Streptomyces galilaeus ATCC 14969 QEU64876.1    
 H4W23_33605   Streptomyces gardneri ATCC 15439 QPK49090.1    
 IAG43_31895   Streptomyces genisteinicus CRPJ-33 QNP67050.1    
 SGLAU_06220   Streptomyces glaucescens GLA.O AIR97266.1    
 GCM10017557_67910   Streptomyces glomeroaurantiacus JCM 4677 BCL31932.1    
 SGFS_026540 (fragment)   Streptomyces graminofaciens A-8890 BBC31360.1    
 SGFS_026530 (fragment)   Streptomyces graminofaciens A-8890 BBC31359.1    
 SGFS_092590   Streptomyces graminofaciens A-8890 BBC37965.1    
 UBV09_05885   Streptomyces griseoincarnatus HNS054 WPW18271.1    
 DWG14_06957   Streptomyces griseorubiginosus 3E-1 AYC42655.1    
 ELQ87_32100   Streptomyces griseoviridis F1-27 AZS88364.1    
 DDJ31_07160   Streptomyces griseoviridis K61 QCN84794.1    
 CEB94_08015   Streptomyces hawaiiensis ATCC 12236 QCD54803.1    
 SHXM_02471   Streptomyces hygroscopicus XM201 AQW49008.1    
 RFN58_08260   Streptomyces iakyrus CGMCC 4.1912 WVG01079.1    
 ABB07_31095   Streptomyces incarnatus NRRL 8089 AKJ14339.1    
 RI060_34840   Streptomyces janthinus JCM 4387 WND22217.1    
 KJK29_31700   Streptomyces koelreuteriae MG62 QWB26780.1    
 J3S85_19990   Streptomyces lavenduligriseus Tu901 WDM13620.1    
 Uncharacterized protein yetA (Sle_55750)   Streptomyces leeuwenhoekii C34 (= DSM 42122 = NRRL B-24963) CQR65032.1    
 JEQ17_38050   Streptomyces liliifuscus ZYC-3 QQM44635.1    
 GJU35_09095   Streptomyces lincolnensis B48 QMV05796.1    
 SLCG_6688   Streptomyces lincolnensis LC-G AXG57843.1    
 SLINC_1722   Streptomyces lincolnensis NRRL 2936 ANS63946.1    
 SLITK23_15350 (fragment)   Streptomyces lividans TK23 BDE38290.1    
 SLIV_30090 (fragment)   Streptomyces lividans TK24 AIJ16911.1    
 R8789_10705 (fragment)   Streptomyces malaysiensis NA3722 WPB89687.1    
 LC193_21445   Streptomyces marincola SCSIO 64649 UCM90291.1    
 SMIR_32250   Streptomyces mirabilis P16B-1 QUW83244.1    
 POD33_27910   Streptomyces moderatus DT446 WCH95754.1    
 CP967_28780   Streptomyces nitrosporeus ATCC 12769 QEU75440.1    
 B1H29_29935   Streptomyces pactum ACT12 AQS70548.1    
 DVK44_00250   Streptomyces paludis GSSD-12 AXG76369.1    
 OGH68_03040   Streptomyces peucetius NA0869 UYQ60549.1    
 OHB35_41220   Streptomyces phaeochromogenes NBC 01752 WSD19154.1    
 OG931_40935   Streptomyces phaeochromogenes NBC_00186 WRZ33661.1    
 F9278_07160   Streptomyces phaeolivaceus GY16 QFQ96006.1    
 NFX46_28145   Streptomyces phaeoluteigriseus Qhu-M197 USQ87252.1    
 CP972_06645   Streptomyces prasinus ATCC 13879 QEV05415.1    
 V3O62_05495   Streptomyces prasinus WY33 WVU03232.1    
 Sfla_5306   Streptomyces pratensis ATCC 33331 ADW06703.1    
 SPRI_6578   Streptomyces pristinaespiralis HCCB 10218 ALC24884.1    
 H3L99_03865   Streptomyces pristinaespiralis PR11 QMU12823.1    
 A4E84_07575   Streptomyces qaidamensis S10(2016) AMW09369.1    
 LUW77_05460   Streptomyces radiopugnans MRC003 URN11578.1    
 M271_10475   Streptomyces rapamycinicus NRRL 5491 AGP53703.1    
 LIV37_10625   Streptomyces rapamycinicus NRRL 5491 UTP29787.1    
 LJB45_05510   Streptomyces rapamycinicus SRMK07 UTO61835.1    
 TUE45_01945   Streptomyces reticuli CUW27228.1    
 TR631_08350   Streptomyces rochei D21E05 WQC11820.1    
 P7W03_07520   Streptomyces rochei JK1 WMC85429.1    
 RBH85_28075   Streptomyces rochei S32 WMI60187.1    
 IAG44_32930   Streptomyces roseirectus CRXT-G-22 QNP73792.1    
 SCAB_74681   Streptomyces scabiei 87.22 CBG74450.1    
 CGL27_38340   Streptomyces sp. 11-1-2 ASQ98102.1    
 P8T65_39065   Streptomyces sp. 11x1 WNZ12979.1    
 SAMN05428941_1580   Streptomyces sp. 2114.2 SDS98004.1    
 SAMN05444521_7291   Streptomyces sp. 3214.6 SHI36088.1    
 ASR50_07260   Streptomyces sp. 4F ALV49222.1    
 K5X85_07575   Streptomyces sp. A144 UAX52894.1    
 IOD14_30185   Streptomyces sp. A2-16 QUC60690.1    
 N7U49_10145   Streptomyces sp. AD2-2 UXX92600.1    
 P8A21_06655   Streptomyces sp. Alt1 WLQ47211.1    
 P8A19_33875   Streptomyces sp. Alt2 WLQ60098.1    
 P8A20_30925   Streptomyces sp. Alt3 WLQ67705.1    
 CVT30_37850   Streptomyces sp. AMCC400023 UJV44842.1    
 RI578_31875   Streptomyces sp. BB1-1-1 WND38598.1    
 JIX56_38135   Streptomyces sp. CA-210063 UUU35211.1    
 C4J65_04410   Streptomyces sp. CB09001 AXL87644.1    
 NI25_31530   Streptomyces sp. CCM_MD2014 AIV37483.1    
 AS200_35980   Streptomyces sp. CdTB01 ALV36874.1    
 RJD14_00780   Streptomyces sp. CGMCC 4.1456 WNF61184.1    
 VJ737_34350   Streptomyces sp. CGMCC 4.1772 WRU02457.1    
 SJH97_05385   Streptomyces sp. CL7 WPP28790.1    
 NNW99_31775   Streptomyces sp. CRCS-T-1 UUA17467.1    
 NNW98_31890   Streptomyces sp. CRLD-Y-1 UUA09862.1    
 V8690_07170   Streptomyces sp. DG1A-41 WWT94304.1    
 JIX55_10595   Streptomyces sp. DSM 40750 UUU20725.1    
 HB370_08810   Streptomyces sp. DSM 40868 QIS70078.1    
 EASAB2608_06734   Streptomyces sp. EAS-AB2608 NBRC 114648 BCM71400.1    
 SAM9427_07570   Streptomyces sp. ETH9427 AXI85782.1    
 A6P39_033350   Streptomyces sp. FXJ1.172 WEO98532.1    
 Q7C01_25955   Streptomyces sp. FXY-T5 WMD07601.1    
 C1703_06285   Streptomyces sp. Go-475 AXE84602.1    
 KBP30_32635   Streptomyces sp. Go40/10 Go 40/10 UFR05620.1    
 MQE23_35955   Streptomyces sp. HP-A2021 UOB14118.1    
 O1G22_34105   Streptomyces sp. HUAS 2-6 WBO67494.1    
 PGH47_07825   Streptomyces sp. HUAS 31 WCD95573.1    
 Q3Y68_30020   Streptomyces sp. HUAS CX7 WKX22055.1    
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