Glycoside Hydrolase Family 5 / Subf 28

Activities in Sub FamilyEndoglycosylceramidase (EC 3.2.1.123);
Mechanism Retaining e
ClanGH-A
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseGlu (experimental)
Catalytic Proton DonorGlu (experimental)
NoteOnce known as cellulase family A; many members have been assigned to subfamilies as described by Aspeborg et al. (2012) BMC Evol Biol. 12(1):186 (PMID: 22992189).
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (4); Uniprot accession (2); PDB accession (6); 3D entries (1); cryst (0)
| 1 | 2 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 V6738_31260   Actinomadura luteofluorescens YN2 WWW01515.1     28
 HUT06_37340   Actinomadura sp. NAK00032 QKW38997.1     28
 F7P10_25690   Actinomadura sp. WMMB499 QFG27299.1     28
 ACTIVE_6803   Actinomadura verrucosospora NRRL:B18236 QKG25152.1     28
 SAMN04489737_0244   Arcanobacterium phocae DSM 10002 SDU77936.1     28
 JTE88_00990   Arcanobacterium phocisimile DSM 26142 QRV02371.1     28
 CUC43_32110   Bacillus thuringiensis LM1212 AXY11283.1     28
 BVH75_30260   Bacillus thuringiensis YGD22-03 ARX70213.1     28
 FJR70_30715   Bacillus tropicus LM1212-W3 QDF27186.1     28
 HDN1F_20130   gamma proteobacterium HdN1 CBL45596.1     28
 L2X98_03535   Microbacterium elymi KUDC0405 UJP13739.1     28
 HQM25_01085   Microbacterium hominis PA2F3 QKJ18144.1     28
 MNR00_01470   Microbacterium sp. H1-D42 UNK71144.1     28
 L2X99_15905   Microbacterium sp. KUDC0406 UJP09841.1     28
 B005_1763   Nocardiopsis alba ATCC BAA-2165 AFR06036.1     28
 KGD84_01185   Nocardiopsis changdeensis Mg02 QUX23054.1     28
 NE857_33290   Nocardiopsis exhalans JCM11759T USY20045.1     28
 HUT17_01340   Nocardiopsis flavescens NA01583 QKW31762.1     28
 CDO52_02365   Nocardiopsis gilva YIM 90087 ASU81787.1     28
 K1J57_10640   Nocardiopsis sp. MT53 QYX38999.1     28
 P9209_25210 (fragment)   Prescottella defluvii SampleD3_15 WFR74703.1     28
 REQ_13700   Prescottella equi 103S CBH47454.1     28
 SCD75_07080   Prescottella equi 134979_2019 WQB75242.1     28
 KAREA_15200   Prescottella equi ATCC 33701 BDC71605.1     28
 C7H75_07755   Prescottella equi DSSKP-R-001 AVP67853.1     28
 RE9414_14400   Prescottella equi JCM94-14 BCN43160.1     28
 RE9416_13830   Prescottella equi JCM94-16 BCN48082.1     28
 RE9425_15410   Prescottella equi JCM94-25 BCN53151.1     28
 RE9427_14170   Prescottella equi JCM94-27 BCN58047.1     28
 RE943_13980   Prescottella equi JCM94-3 BCN67925.1     28
 RE9431_14340   Prescottella equi JCM94-31 BCN62979.1     28
 RE0327_14310   Prescottella equi JID03-27 BCN72832.1     28
 RE0346_14900   Prescottella equi JID03-46 BCN77830.1     28
 RE0356_14830   Prescottella equi JID03-56 BCN82842.1     28
 GS533_016195   Prescottella equi lh_12 UPH34954.1     28
 MPC38_07340   Prescottella equi P2117036 UNQ41061.1     28
 MPC39_07170   Prescottella equi P2120831 UNQ36377.1     28
 MWT96_05515   Prescottella equi PAM2287 UPH42608.1     28
 REA19_13860   Prescottella equi U19 BDE58370.1     28
 P9990_25585   Prescottella equi WH99 WJJ14566.1     28
 P9990_16960   Prescottella equi WH99 WJJ10260.1     28
 FNU77_02835   Prescottella equi WY QDP08738.1     28
 G6O69_19060   Pseudenhygromyxa sp. WMMC2535 QII76704.1     28
 XU06_27470   Rhodococcus erythropolis BG43 AKE01030.1     28
 O5Y_27195   Rhodococcus erythropolis CCM2595 AGT95256.1     28
 ITJ47_29785 (fragment)   Rhodococcus erythropolis CERE8 UKO86234.1     28
 D4768_28140   Rhodococcus erythropolis D310-1 UJC81142.1     28
 RE2895_55370 (fragment)   Rhodococcus erythropolis JCM 2895 BBE48606.1     28
 G9444_5959   Rhodococcus erythropolis KB1 QIP43202.1     28
 QIE55_27995   Rhodococcus erythropolis MGMM8 WGV49324.2
WGV49324.1
    28
 RER_56930   Rhodococcus erythropolis PR4 BAH36401.1     28
 H351_05000   Rhodococcus erythropolis R138 ALU68549.1     28
 JXX30_27295   Rhodococcus erythropolis R85 QSE40966.1     28
 F6X56_30770   Rhodococcus erythropolis X5 QEX13806.1     28
 WDS21_26975   Rhodococcus qingshengii 190158 WXH52868.1     28
 IM699_16455   Rhodococcus qingshengii 7B QOS61013.1     28
 R0122_08890   Rhodococcus qingshengii A29-k1 WOI88861.1     28
 J6K27_005480   Rhodococcus qingshengii CL-05 QTS00178.1     28
 PI247_27245 (fragment)   Rhodococcus qingshengii DC2 WCT02367.1     28
 C1M55_29060   Rhodococcus qingshengii djl-6-2 AUS35611.1     28
 JKI97_10130   Rhodococcus qingshengii F2-2 ULD43355.1     28
 LRQ08_27625   Rhodococcus qingshengii J1-2 UUE24962.1     28
 M0639_27710   Rhodococcus qingshengii JCM 15477 djl-6 UPU42771.1     28
 RQN9TF_28820   Rhodococcus qingshengii N9T-4 BDQ23245.1     28
 N6G92_27620   Rhodococcus qingshengii PM1 UXF67104.1     28
 D6M20_26540   Rhodococcus qingshengii RL1 QEM30080.1     28
 KSE96_27470   Rhodococcus qingshengii TG-1 QXC42749.1     28
 LE551_27535   Rhodococcus qingshengii VER34 UDF20985.1     28
 I1G86_01705   Rhodococcus qingshengii VKM Ac-2784D QPG90032.1     28
 LRL17_22690   Rhodococcus qingshengii VT6 UGQ50809.1     28
 endoglycoceramidase II (EGCase II; M777_EGCase II) 3.2.1.123 Rhodococcus sp. (in: high G+C Gram-positive bacteria) M-777 AAB67050.1 O33853 2OSW[A,B]
2OSX[A]
2OSY[A,B]
2OYK[A,B]
2OYL[A,B]
2OYM[A,B]
28
 AOT96_08730   Rhodococcus sp. 008 ANQ74830.1     28
 ERC79_08785   Rhodococcus sp. ABRD24 QBJ96057.1     28
 ERC79_16430   Rhodococcus sp. ABRD24 QBJ97348.1     28
 A0W34_27420   Rhodococcus sp. BH4 ARE37572.1     28
 KTR60_27345   Rhodococcus sp. C1 UEL32888.1     28
 endoglycoceramidase I (EGCase I) 3.2.1.123 Rhodococcus sp. C9 BAB17317.1 Q9FAC7   28
 RA302_27825   Rhodococcus sp. DN22 strain DN22 WVX70237.1     28
 CPI83_01720   Rhodococcus sp. H-CA8f ATI35656.1     28
 BTZ20_5019   Rhodococcus sp. MTM3W5.2 AQA22291.1     28
 BTZ20_4323   Rhodococcus sp. MTM3W5.2 AQA22644.1     28
 I7X09_18420   Rhodococcus sp. P-2 QQM20049.1     28
 P0M12_10505   Rhodococcus sp. RCBS9 WEX05832.1     28
 RHP72_27580   Rhodococcus sp. SG20037 WNF41493.1     28
 JQX30_19105   Saccharopolyspora erythraea NRRL 23338 QRK86981.1     28
 SACE_3752   Saccharopolyspora erythraea NRRL 2338 CAM03023.1     28
 HUO13_20185   Saccharopolyspora erythraea SCSIO 07745 QUH02818.1     28
 Snas_0664   Stackebrandtia nassauensis DSM 44728 ADD40377.1     28
 GXP74_04895   Streptacidiphilus sp. P02-A3a QMU67663.1     28
 GXW83_04505   Streptacidiphilus sp. PB12-B1b QMU75132.1     28
 GCM10020241_49030   Streptoalloteichus tenebrarius JCM 4838 BFF03228.1     28
 K7396_00620   Streptomyces angustmyceticus JCM 4053 UAL65209.1     28
 K7C20_35075   Streptomyces decoyicus NRRL 2666 QZY19805.1     28
 KY5_5124   Streptomyces formicae KY5 ATL30142.1     28
 test1122_18915   Streptomyces gobiensis 1_25 UGY93585.1     28
 K9S39_38155   Streptomyces halobius 3_2 UQA98106.1     28
 DWB77_02953 (fragment)   Streptomyces hundungensis BH38 AYG80815.1     28
 KI385_42030   Streptomyces inhibens NRRL30439 UKY54728.1     28
 CP970_15640   Streptomyces kanamyceticus ATCC 12853 QEU92146.1     28
 LGI35_43485   Streptomyces longhuiensis BH-MK-02 UDM04628.1     28
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