Glycoside Hydrolase Family 5 / Subf 28

Activities in Sub FamilyEndoglycosylceramidase (EC 3.2.1.123);
Mechanism Retaining e
ClanGH-A
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseGlu (experimental)
Catalytic Proton DonorGlu (experimental)
NoteOnce known as cellulase family A; many members have been assigned to subfamilies as described by Aspeborg et al. (2012) BMC Evol Biol. 12(1):186 (PMID: 22992189).
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (4); Uniprot accession (2); PDB accession (6); 3D entries (1); cryst (0)
Bacteria
Protein Name EC# OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
Subf
 endoglycoceramidase II (EGCase II; M777_EGCase II) 3.2.1.123 Rhodococcus sp. (in: high G+C Gram-positive bacteria) M-777 AAB67050.1 O33853
2OSW[A,B] 1.60
2OSX[A] α-D-Neup5Ac-(2-3)-β-D-Galp-(1-4)-β-D-Glcp-(1-1)-<non_carb>
1.10
2OSY[A,B] β-D-Galp-(1-4)-α-D-Glcp-(1-4)-GLU
2.10
2OYK[A,B] β-D-Glcp-(1-1)-<non_carb>
1.50
2OYL[A,B] β-D-Glcp-(1-1)-<non_carb>
1.80
2OYM[A,B] <carb_like_MNI>
1.86
28
Top




Last update: 2024-03-18 © Copyright 1998-2024
AFMB - CNRS - Université d'Aix-Marseille