| Activities in Sub Family | Xylan β-1,4-xylosidase (EC 3.2.1.37); α-L-arabinofuranosidase (EC 3.2.1.55); β-1,3-xylosidase (EC 3.2.1.72); |
|---|---|
| Mechanism | Inverting e |
| Clan | GH-F |
| 3D Structure Status | 5-fold β-propeller |
| Catalytic Nucleophile/Base | Asp |
| Catalytic Proton Donor | Glu |
| Note | Many members have been assigned to subfamilies as described by Mewis et al. (2016) Appl. Environm. Microbiol. 82:1686-1692 (PMID: 26729713). |
| External resources | CAZypedia; |
| Commercial Enzyme Provider(s) | MEGAZYME; NZYTech; PROZOMIX; |
| Statistics | GenBank accession (5); Uniprot accession (17); PDB accession (12); 3D entries (6); cryst (0) |
| Bacteria | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| bifunctional endo-β-1,4-xylanase / α-L-arabinofuranosidase (BiXyn10B/BiAra43A;BACINT_04202) (Xyn10B/Ara43A) | 3.2.1.55 | pubmed |
Bacteroides intestinalis DSM 17393 | EDV05059.1 | B3CES1 | 12 | ||
| α-L-arabinofuranosidase (BACOVA_03421; Bovatus_03717) | 3.2.1.55 | pubmed |
Bacteroides ovatus ATCC 8483 | ALJ48322.1 EDO10788.1 |
A7LZZ4 | 12 | ||
| α-L-arabinofuranosidase (BACOVA_03425; Bovatus_03721) | 3.2.1.55 | pubmed |
Bacteroides ovatus ATCC 8483 | ALJ48326.1 EDO10792.1 |
A7LZZ8 | 12 | ||
| bifunctional xyloglucan α-1,2-L-arabinofuranoside and β-1,2-xylosidase 43A (Xynb_4; BoGH43A; BACOVA_02654; Bovatus_03073) | 3.2.1.55 | pubmed |
Bacteroides ovatus ATCC 8483 | ALJ47681.1 | A7LXT8 | 5JOW[A,B] 5JOX[A,B] 5JOY[A,B] |
12 | |
| α-L-arabinofuranoside (Xynb_5;BoGH43B;BACOVA_02656;Bovatus_03074) | 3.2.1.55 | pubmed |
Bacteroides ovatus ATCC 8483 | ALJ47682.1 | A7LXU0 | 5JOZ[A,B] | 12 | |
| α-L-arabinofuranosidase / β-1,3-xylosidase (AXH-m; AbfA; BAD_0423; BAD0423) | 3.2.1.55 3.2.1.72 |
pubmed pubmed |
Bifidobacterium adolescentis ATCC 15703 | BAF39204.1 | A1A0H1 | 12 | ||
| α-L-arabinofuranosidase 3 (BfdABF3; HMPREF0168_1372) | 3.2.1.55 | pubmed |
Bifidobacterium dentium ATCC 27679 | EFM41056.1 | E0Q8B4 | 12 | ||
| α-L-arabinofuranosidase / β-xylosidase (XylB) | 3.2.1.37 3.2.1.55 |
pubmed pubmed |
Butyrivibrio fibrisolvens GS 113 | AAA63610.1 | P45982 | 12 | ||
| β-xylosidase (Xyl;GbtXyl43A) (Xyl43A) | 3.2.1.37 | pubmed |
Geobacillus thermoleovorans IT-08 | ABC75004.1 | Q2I2N4 | 5Z5D[A] 5Z5F[A] 5Z5H[A] 5Z5I[A] |
12 | |
| α-L-arabinofuranosidase / xylan 1,4-β-xylosidase (ArfC; HHT355_2105) | 3.2.1.55 | pubmed |
Herbinix hemicellulosilytica | CRZ35303.1 | A0A0H5SY45 | 12 | ||
| β-xylosidase (PxXyl43A) (Xyl43A) | 3.2.1.37 | pubmed |
Paenibacillus xylaniclasticus TW1 | BDA87314.1 | 12 | |||
| β-1,3-xylosidase 43B (JOP69_09845) (Xyl43B) | 3.2.1.72 | pubmed |
Polaribacter sp. Q13 | QVY64080.1 | 12 | |||
| α-L-arabinofuranosidase (RiAbf43A;ROSINTL182_08193) (Abf43A) | 3.2.1.55 | pubmed |
Roseburia intestinalis L1-82 | EEU99940.1 | C7GE41 | 12 | ||
| arabinoxylan arabinofuranohydrolase (ORF2351) (Ara43A) | 3.2.1.55 | pubmed |
Segatella baroniae B14 | ADI70680.1 | D7SFH6 | 12 | ||
| α-L-arabinofuranosidase (PREVCOP_02123; PREVCOP_06096) | 3.2.1.55 | pubmed |
Segatella copri DSM 18205 | EFB34377.1 | D1PFT8 | 12 | ||
| β-1,3-xylosidase (SWU43A) | 3.2.1.72 | pubmed |
Streptomyces sp. SWU10 | BBA57882.1 | A0A292GDW2 | 12 | ||
| [ginsenoside] β-xylosidase (StGH43; STRTUCAR8_01029) | 3.2.1.37 | pubmed |
Streptomyces turgidiscabies Car8 | ELP66521.1 | L7F656 | 12 | ||
| α-L-arabinofuranosidase / β-xylosidase (deAX) | 3.2.1.37 3.2.1.55 |
pubmed pubmed |
uncultured bacterium | ACF39706.1 | B8QP77 | 12 | ||
| α-L-arabinofuranosidase / β-xylosidase (deAFc) | 3.2.1.37 3.2.1.55 |
doi doi |
uncultured bacterium | ABB92159.1 | A0S5D8 | 12 | ||
| unclassified | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| α-L-arabinofuranosidase (CapGH43_12) | 3.2.1.55 | pubmed |
metagenome | UMW87593.1 | 7JVH[A,B,C,D,E,F] | 12 | ||
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