Activities in Sub Family	β-D-fucosidase (EC 3.2.1.38);
Mechanism	Retaining e
Clan	GH-A
3D Structure Status	( β / α ) 8 barrel
Catalytic Nucleophile/Base	Glu (experimental)
Catalytic Proton Donor	Glu (inferred)
Note	Following St John et al. [FEBS Letters 584:4435-4441 (2010); PMID: 20932833] several GH5 subfamilies have been reassigned to GH30. The subfamilies in GH30 are now indicated.
External resources	CAZypedia; Gaucher Disease; PRINTS;
Statistics	GenBank accession (495); Uniprot accession (2); PDB accession (1); 3D entries (1); cryst (0)

page précédente | 1 | 2 | 3 | 4 | 5 | page suivante
Bacteria
Protein Name	EC#	Organism	GenBank	Uniprot	PDB/3D	Subf
GAIMETA21S07_07660		Phocaeicola vulgatus MG01-07	BDC08978.1			4
GAIMETA21S10_09100		Phocaeicola vulgatus MG01-10	BDC13146.1			4
BvMPK_2108		Phocaeicola vulgatus mpk	ALK84708.1			4
BvMPK_0621		Phocaeicola vulgatus mpk	ALK83242.1			4
BvMPK_0622		Phocaeicola vulgatus mpk	ALK83243.1			4
VIC01_00407 (Xync_1)		Phocaeicola vulgatus VIC01	QEW34958.1			4
VIC01_00406		Phocaeicola vulgatus VIC01	QEW34957.1			4
H744_1c0313		Photobacterium gaetbulicola Gung47	AJR05338.1			4
PTW35_24730		Photobacterium sp. DA100	WEM44479.1			4
BW723_06300		Polaribacter reichenbachii 6Alg 8T	APZ48078.1			4
BTO17_14320		Polaribacter reichenbachii KCTC 23969	AUC20553.1			4
BTO15_04975		Polaribacter sejongensis KCTC 23670	AUC23980.1			4
H0I28_14610		Polaribacter sp. AHE13PA	QXP66394.1			4
BXQ17_12275		Polaribacter sp. BM10	AQS94807.1			4
BXQ17_12265		Polaribacter sp. BM10	AQS94805.1			4
H0I27_01455		Polaribacter sp. HaHaR_3_91	QXP63894.1			4
SAMN05216503_0037		Polaribacter sp. KT25b	SDR65501.1			4
H0I29_07370		Polaribacter sp. R2A056_3_33	QXP71887.1			4
NQP51_12230		Polaribacter undariae KCTC 42175	UWD30906.1			4
PZB74_21405		Porifericola rhodea NBRC 107748	WKN31509.1			4
L6468_01350		Prevotella communis E1-9	UKK62450.1			4
Prede_2248		Prevotella dentalis DSM 3688	AGB29516.1			4
prwr041_04280		Prevotella herbatica WR041	BCS84535.1			4
prwr041_04270		Prevotella herbatica WR041	BCS84534.1			4
L6473_01345		Prevotella sp. E1-a	UKK65275.1			4
L6464_13930		Prevotella sp. E13-1	UKK67689.1			4
L6476_01750		Prevotella sp. E13-3	UKK57007.1			4
L6466_12735		Prevotella sp. E15-14	UKK70164.1			4
M1D30_12205		Prevotella sp. E15-22	UPS44310.1			4
L6470_01450		Prevotella sp. E2-25	UKK59707.1			4
L6465_00955		Prevotella sp. E2-28	UKK53874.1			4
PSM36_2070		Proteiniphilum saccharofermentans	SCD20877.1			4
PSM36_0937		Proteiniphilum saccharofermentans	SCD19763.1			4
APS56_11335		Pseudalgibacter alginicilyticus HZ22	ALJ05680.1			4
E0W69_010845		Rhizosphaericola mali B3-10	QES89135.1			4
DR864_02765		Runella rosea HYN0085	AXE16727.1			4
Runsl_4371		Runella slithyformis DSM 19594	AEI50700.1			4
DTQ70_14255		Runella sp. SP2	AYQ33250.1			4
L21SP3_00018		Sedimentisphaera cyanobacteriorum L21-RPul-D3	AQQ08242.1			4
STSP1_02212		Sedimentisphaera salicampi ST-PulAB-D4	ARN57786.1			4
β-D-fucosidase A (FucA;PbFucA;Pb280;ORF0280;PBR_0285)	3.2.1.38	Segatella baroniae B14	EFI72736.1 ZP_07060000.1	D8DV06		4
β-D-fucosidase B (FucB;PbFucB;Pb281;ORF0281;PBR_0286)	3.2.1.38	Segatella baroniae B14	EFI72737.1 ZP_07060001.1	D8DV07		4
L6469_12660		Segatella baroniae B14	UKK79209.1			4
L6469_12655		Segatella baroniae B14	UKK79962.1			4
L6467_03285		Segatella bryantii 92/1	UKK72132.1			4
L6467_03290		Segatella bryantii 92/1	UKK72670.1			4
L6474_11370		Segatella bryantii TC1-1	UKK82494.1			4
L6474_11365		Segatella bryantii TC1-1	UKK82611.1			4
L6471_02600		Segatella bryantii TS1-5	UKK74616.1			4
L6471_02605		Segatella bryantii TS1-5	UKK75313.1			4
NQ544_09815		Segatella copri DSM 18205	UWP53713.1			4
KUA49_012140		Segatella copri HDE06	WOZ86457.1			4
FO447_07370		Segatella copri YF2	QNT66374.1			4
FO447_07365		Segatella copri YF2	QNT66373.1			4
NCTC13071_01014		Segatella oris NCTC13071	VEH15028.1			4
NCTC13071_01015		Segatella oris NCTC13071	VEH15029.1			4
LS482_18495		Sinomicrobium kalidii HD2P242	UGU15659.1			4
CA265_05800		Sphingobacteriaceae bacterium GW460-11-11-14-LB5	ARS39212.1			4
PQ465_13575		Sphingobacterium sp. KACC 22765	WDF67335.1			4
PQ465_13570		Sphingobacterium sp. KACC 22765	WDF67334.1			4
G8759_10700		Spirosoma aureum BT328	QIP13063.1			4
GJR95_34065		Spirosoma endbachense I-24	QHV99731.1			4
H3H32_33135		Spirosoma foliorum KCTC 72228	QMW02693.1			4
Slin_2880		Spirosoma linguale DSM 74	ADB38893.1			4
CWM47_06350		Spirosoma pollinicola HA7	AUD01465.1			4
HH216_10185		Spirosoma rhododendri CJU-R4	QJD78755.1			4
EXU85_18470		Spirosoma sp. KCTC 42546	QDK80480.1			4
LN737_14275		Spirosoma sp. KNUC1025	UFH57163.1			4
HU175_14225		Spirosoma sp. KUDC1026	QKZ13726.1			4
SAMN06298216_1194		Spirosomataceae bacterium TFI 002	SOE20710.1			4
ORF (fragment)		uncultured bacterium A2_10	AEW47941.1			4
ORF		uncultured bacterium B2_18	AEW47946.1			4
IX92_19670		Vibrio coralliilyticus RE98	AIW21245.1			4
J4N42_21680		Vibrio sp. SCSIO 43135	USD44198.1			4
GGC03_23615		Vibrio sp. THAF191c	QGN72775.1			4
GGC04_24395		Vibrio sp. THAF191d	QGM37434.1			4
FIU99_16830		Vibrio sp. THAF64	QFT38028.1			4
SAMN04489797_1731		Winogradskyella sp. RHA_55	SDS49858.1			4
SAMN04489797_1729		Winogradskyella sp. RHA_55	SDS49803.1			4
J4031_12850		Xylanibacter ruminicola KHP1	QVJ80556.1			4
J4031_12855		Xylanibacter ruminicola KHP1	QVJ80557.1			4
zobellia_3516		Zobellia galactanivorans DsijT	CAZ97654.1			4
Q5W13_00645		Zobellia laminariae AS94	WKX76721.1			4
ZPR_4649 (fragment)		Zunongwangia profunda SM-A87	ADF54949.1			4
PBT91_15640		Zunongwangia sp. HGR-M22	WBL25318.1			4
PBT89_02125		Zunongwangia sp. HRR-M8	WBL22768.1			4
INR75_04180		Zunongwangia sp. SCSIO 43204	UAB86374.1			4
INR75_18455		Zunongwangia sp. SCSIO 43204	UAB84121.1			4
Top

Last update: 2024-04-25 © Copyright 1998-2024
AFMB - CNRS - Université d'Aix-Marseille