Glycoside Hydrolase Family 13 / Subf 42

Activities in Sub Family[retaining] α-amylase (EC 3.2.1.1);
[retaining] maltohexaose-producing α-amylase (EC 3.2.1.98);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (2); Uniprot accession (2);
| 1 | 2 | 3 | 4 | 5 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 QNH28_26230   Paenibacillus sp. G2S3 WHY18872.1     42
 T3H97_12195 (fragment)   halophilic eubacterium NRCC 41227 LX16 WVD78707.1     42
 T3H97_12395   halophilic eubacterium NRCC 41227 LX16 WVD78743.1     42
 C0638_18820   Paenibacillus sp. lzh-N1 AUO08463.1     42
 EGM68_14640   Paenibacillus sp. M-152 AZH29901.1     42
 CIC07_12110   Paenibacillus sp. RUD330 ASS66823.1     42
 KAI36_02499   Paenibacillus sp. S02 QYK67349.1     42
 KAI37_02543   Paenibacillus sp. S25 QYK62213.1     42
 PSTEL_03005   Paenibacillus stellifer DSM 14472 AIQ62238.1     42
 HPL003_21350   Paenibacillus terrae HPL-003 AET61000.1     42
 JRJ22_14230   Paenibacillus tianjinensis TB2019 QSF42489.1     42
 KIH87_15395   Paraneptunicella aestuarii NBU2194 UAA38062.1     42
 C7M71_002505   Peterkaempfera bronchialis DSM 106435 AXI81103.1     42
 LN341_17380 (fragment)   Photobacterium sp. TLY01 UIP30487.1     42
 CPZ87_08060   Piscinibacter gummiphilus NBRC 109400 ATU64529.1     42
 A4W93_07980   Piscinibacter gummiphilus NS21 ARN23783.1     42
 Prubr_37240 (fragment)   Polymorphospora rubra NBRC 101157 BCJ66703.1     42
 Pse7367_2429   Pseudanabaena sp. PCC 7367 AFY70690.1     42
 REIFOR_01122   Reinekea forsetii Hel1_31_D35 ATX76271.1     42
 PCC8801_4158   Rippkaea orientalis PCC 8801 ACK68090.1     42
 Cyan8802_4198   Rippkaea orientalis PCC 8802 ACV02990.1     42
 RZN69_18285   Puniceicoccus sp. CR14 WOO40574.1     42
 E5Z56_04175   Ruminococcus bovis JE7A12 QCT07981.1     42
 E5Z56_07250   Ruminococcus bovis JE7A12 QCT07168.1     42
 RBR_04300 (Amy1)   Ruminococcus bromii L2-63 CBL14833.1     42
 RBR_04930 (Amy2)   Ruminococcus bromii L2-63 CBL14887.1     42
 LCN94_09005   Ruminococcus sp. FMB-CY1 WBX57046.1     42
 LCN94_03575   Ruminococcus sp. FMB-CY1 WBX58196.1     42
 KGF34_04715   Ruminococcus sp. FMBCY1 USP70636.1     42
 KGF34_10980   Ruminococcus sp. FMBCY1 USP69653.1     42
 GCM10017745_55910 (fragment)   Saccharothrix mutabilis subsp. capreolus JCM 4248 BFE52164.1     42
 IOD16_15770   Saccharothrix sp. 6-C QQQ79723.1     42
 L21SP2_0791   Salinispira pacifica L21-RPul-D2 AHC14213.1     42
 RJT10_06270   Segatella copri H-2379 WOF95063.1     42
 RJT10_06255   Segatella copri H-2379 WOF95060.1     42
 RJT10_06265   Segatella copri H-2379 WOF95062.1     42
 RJT10_06260   Segatella copri H-2379 WOF95061.1     42
 RJT00_15645   Segatella copri H-2446 MDV3114762.1     42
 RJT00_15655   Segatella copri H-2446 MDV3114764.1     42
 RJT00_15640   Segatella copri H-2446 MDV3114761.1     42
 RJT00_15650   Segatella copri H-2446 MDV3114763.1     42
 RJT04_06580   Segatella copri H-2477 WOG33285.1     42
 RJT04_06595   Segatella copri H-2477 WOG33288.1     42
 RJT04_06590   Segatella copri H-2477 WOG33287.1     42
 RJT04_06585   Segatella copri H-2477 WOG33286.1     42
 RJT05_06140   Segatella copri H-2489 WOF88920.1     42
 RJT05_06130   Segatella copri H-2489 WOF88918.1     42
 RJT05_06135   Segatella copri H-2489 WOF88919.1     42
 RJT05_06125   Segatella copri H-2489 WOF88917.1     42
 RJT12_15680   Segatella copri H-2497 WOF96850.1     42
 RJT09_14935   Segatella copri H-2632 MDV3107737.1     42
 RJT09_14925   Segatella copri H-2632 MDV3107735.1     42
 RJT09_14930   Segatella copri H-2632 MDV3107736.1     42
 RJT09_14940   Segatella copri H-2632 MDV3107738.1     42
 FO447_02945   Segatella copri YF2 QNT65573.1     42
 FO447_02935   Segatella copri YF2 QNT65572.1     42
 FO447_02930   Segatella copri YF2 QNT65571.1     42
 KUA50_005415   Segatella hominis HDD12 WOZ82401.1     42
 M5M_06695   Simiduia agarivorans SA1 = DSM 21679 AFU98534.1     42
 Spiaf_2520   Spirochaeta africana DSM 8902 AFG38550.1     42
 STAUR_2905   Stigmatella aurantiaca DW4/3-1 ADO70697.1     42
 RJW51_04115   Streptococcus parasuis 1628469 WNF87299.1     42
 QSV38_08390   Streptococcus parasuis 7500 WJQ85333.1     42
 JOA01_07550   Streptococcus parasuis BS26 QXF05156.1     42
 KQ224_09105   Streptococcus parasuis H35 QWV86167.1     42
 KEM15_07910   Streptococcus parasuis NN1 WDM37195.1     42
 NWE22_08190   Streptococcus parasuis SFJ45 WFB91603.1     42
 LOD78_07755   Streptococcus parasuis SS17 WDN59990.1     42
 LOD77_07835   Streptococcus parasuis SS20 WDN58174.1     42
 SUT286_16750   Streptococcus parasuis SUT-286 BCP60349.1     42
 SUT380_16360 (fragment)   Streptococcus parasuis SUT-380 BCP62448.1     42
 SUT503_16320   Streptococcus parasuis SUT-503 BCP64574.1     42
 D2A30_08205   Streptococcus suis SFJ44 ULL21556.1     42
 DMT42_01645   Streptomyces actuosus ATCC 25421 AWT41157.1     42
 HCX60_03665   Streptomyces antibioticus DSM 41481 QIT42730.1     42
 QPM16_01830   Streptomyces anulatus K-31 WIY74558.1     42
 OG771_02845   Streptomyces anulatus NBC_01421 WUY02591.1     42
 KZO11_01820   Streptomyces anulatus VUW1 QYA92525.1     42
 G9272_03330   Streptomyces asoensis H2S5 QJS99456.1     42
 I6J39_01720   Streptomyces californicus FDAARGOS_1209 QRV26149.1     42
 I6J40_32795   Streptomyces californicus FDAARGOS_1210 QRV58471.1     42
 I6J41_01550   Streptomyces californicus FDAARGOS_1211 QRV39551.1     42
 I6J42_32035   Streptomyces californicus FDAARGOS_1212 QRV38188.1     42
 I6J43_01590   Streptomyces californicus FDAARGOS_1213 QRV46300.1     42
 PYS65_00715   Streptomyces sp. HUAS 5 WGD38806.1     42
 CVT27_01745   Streptomyces cavourensis 1AS2a ATY94319.1     42
 NLU04_18370   Streptomyces cavourensis F2 UTR80302.1     42
 OUQ49_02085   Streptomyces cavourensis NA4 WAE64610.1     42
 DTW94_01825   Streptomyces cavourensis TJ430 AXI70147.1     42
 CP977_31620   Streptomyces cinereoruber ATCC 19740 QEV36161.1     42
 STRCI_007774   Streptomyces cinnabarinus DSM 40467 WAZ26220.1     42
 SCO7019 (Aml)   Streptomyces coelicolor A3(2) CAB88152.1
NP_631083.1
    42
 FQ762_36225   Streptomyces coelicolor A3(2) CFB_NBC_0001 QFI46790.1     42
 JCM4020_70170   Streptomyces coelicolor JCM 4020 BDD76397.1     42
 HCU77_35340   Streptomyces coelicolor M1154/pAMX4/pGP1416 QKN70284.1     42
 RE436_35185   Streptomyces coelicolor M22 WMT37365.1     42
 R2B67_34090   Streptomyces cyaneofuscatus 89-2-2 WOP13278.1     42
 SJX93_02130   Streptomyces cyaneofuscatus NEB1061 WRO08473.1     42
 TU94_29395   Streptomyces cyaneogriseus subsp. noncyanogenus NMWT 1 AJP04951.1     42
 BN159_0648 (fragment)   Streptomyces davaonensis JCM 4913 CCK25027.1     42
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